Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RPS6

Gene Name Gene ID Reads Annotation
RPS6 ENSGALG00000015082 307412 ribosomal protein S6 [Source:NCBI gene;Acc:396148]











Genes with expression patterns similar to RPS6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RPS6 ENSGALG00000015082 307412 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein S6 [Source:NCBI gene;Acc:396148]
2. TMEM18 ENSGALG00000028744 11779 0.959 - - - - 0.959 - - - - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
3. MRPS11 ENSGALG00000006777 16009 0.958 - - - - 0.958 - - - - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
4. TRIM33 ENSGALG00000001976 7404 0.957 - - - - 0.957 - - - - - tripartite motif containing 33 [Source:HGNC Symbol;Acc:HGNC:16290]
5. RAE1 ENSGALG00000007653 8930 0.956 - - - - 0.956 - - - - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
6. LUC7L2 ENSGALG00000036238 11817 0.956 - - - - 0.956 - - - - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
7. BCL9 ENSGALG00000037655 4620 0.954 - - - - 0.954 - - - - - B cell CLL/lymphoma 9 [Source:HGNC Symbol;Acc:HGNC:1008]
8. PPAPDC1B PPAPDC1B 6698 0.954 - - - - 0.954 - - - - -
9. MYEOV2 MYEOV2 5155 0.954 - - - - 0.954 - - - - -
10. IBA57 ENSGALG00000005328 4362 0.953 - - - - 0.953 - - - - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
11. RNF113A ENSGALG00000000538 3985 0.953 - - - - 0.953 - - - - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
12. CREPT CREPT 17142 0.952 - - - - 0.952 - - - - -
13. MED1 ENSGALG00000001708 9556 0.952 - - - - 0.952 - - - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
14. USP1 ENSGALG00000010957 8297 0.951 - - - - 0.951 - - - - - ubiquitin specific peptidase 1 [Source:NCBI gene;Acc:424685]
15. TM2D2 ENSGALG00000003356 7088 0.951 - - - - 0.951 - - - - - TM2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24127]
16. BRP44L BRP44L 30452 0.951 - - - - 0.951 - - - - -
17. NOL6 ENSGALG00000030730 7191 0.951 - - - - 0.951 - - - - - nucleolar protein 6
18. gga-mir-6584 ENSGALG00000028834 1481 0.951 - - - - 0.951 - - - - - gga-mir-6584 [Source:miRBase;Acc:MI0022404]
19. CCDC59 ENSGALG00000028648 9272 0.951 - - - - 0.951 - - - - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
20. MRPL22 ENSGALG00000003919 2760 0.951 - - - - 0.951 - - - - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
21. RBM26 ENSGALG00000016910 13769 0.951 - - - - 0.951 - - - - - RNA binding motif protein 26 [Source:HGNC Symbol;Acc:HGNC:20327]
22. THBS1 ENSGALG00000009626 3521 0.951 - - - - 0.951 - - - - - thrombospondin 1 [Source:NCBI gene;Acc:373987]
23. ABCC1 ENSGALG00000006646 2596 0.951 - - - - 0.951 - - - - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
24. TMEM39B ENSGALG00000003287 4125 0.95 - - - - 0.950 - - - - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
25. EPB41L1 ENSGALG00000034171 3616 0.95 - - - - 0.950 - - - - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
26. UQCRC2 ENSGALG00000002490 23477 0.95 - - - - 0.950 - - - - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
27. C15H12ORF49 C15H12ORF49 13250 0.95 - - - - 0.950 - - - - -
28. WHSC1L1 4065 0.95 - - - - 0.950 - - - - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X8
29. NDST2 ENSGALG00000005107 4224 0.95 - - - - 0.950 - - - - - N-deacetylase and N-sulfotransferase 2, transcript variant X2
30. ETF1 ENSGALG00000002262 14560 0.95 - - - - 0.950 - - - - - eukaryotic translation termination factor 1 [Source:HGNC Symbol;Acc:HGNC:3477]
31. UBE2G2 ENSGALG00000005667 12689 0.949 - - - - 0.949 - - - - - ubiquitin conjugating enzyme E2 G2 [Source:NCBI gene;Acc:424837]
32. RILPL2 ENSGALG00000003321 5632 0.949 - - - - 0.949 - - - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
33. M6PR ENSGALG00000031681 9442 0.949 - - - - 0.949 - - - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
34. DNAJC2 ENSGALG00000008249 28064 0.949 - - - - 0.949 - - - - - DnaJ heat shock protein family (Hsp40) member C2 [Source:NCBI gene;Acc:417717]
35. SEC61A2 ENSGALG00000036300 4235 0.949 - - - - 0.949 - - - - - Gallus gallus Sec61 translocon alpha 2 subunit (SEC61A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321620]
36. TBC1D7 ENSGALG00000012731 4891 0.949 - - - - 0.949 - - - - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
37. PHKA1 ENSGALG00000004801 2510 0.949 - - - - 0.949 - - - - - phosphorylase kinase regulatory subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:8925]
38. HMGB3 ENSGALG00000009071 12011 0.948 - - - - 0.948 - - - - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
39. MRPL46 ENSGALG00000006782 5033 0.948 - - - - 0.948 - - - - - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
40. HTRA3 ENSGALG00000034673 512 0.948 - - - - 0.948 - - - - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
41. VPS8 ENSGALG00000006704 5419 0.948 - - - - 0.948 - - - - - VPS8, CORVET complex subunit [Source:HGNC Symbol;Acc:HGNC:29122]
42. PSMD14 ENSGALG00000011128 13335 0.947 - - - - 0.947 - - - - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
43. ESRP2 ENSGALG00000003374 4436 0.947 - - - - 0.947 - - - - - epithelial splicing regulatory protein 2 [Source:NCBI gene;Acc:415710]
44. SEC63 ENSGALG00000015308 11596 0.947 - - - - 0.947 - - - - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
45. PGAM5 ENSGALG00000002137 7700 0.947 - - - - 0.947 - - - - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
46. HYOU1 ENSGALG00000007659 3555 0.946 - - - - 0.946 - - - - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
47. RALB ENSGALG00000026493 14590 0.946 - - - - 0.946 - - - - - RAS like proto-oncogene B [Source:HGNC Symbol;Acc:HGNC:9840]
48. MAP1B ENSGALG00000014999 6288 0.946 - - - - 0.946 - - - - - microtubule associated protein 1B
49. OPTC ENSGALG00000003554 3698 0.945 - - - - 0.945 - - - - - opticin [Source:NCBI gene;Acc:395130]
50. TNPO3 ENSGALG00000039420 5178 0.945 - - - - 0.945 - - - - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
51. KCTD9 ENSGALG00000000275 3455 0.945 - - - - 0.945 - - - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
52. PUF60 ENSGALG00000039901 26902 0.945 - - - - 0.945 - - - - - poly(U) binding splicing factor 60 [Source:NCBI gene;Acc:426402]
53. TBRG4 ENSGALG00000038102 9269 0.945 - - - - 0.945 - - - - - transforming growth factor beta regulator 4 [Source:HGNC Symbol;Acc:HGNC:17443]
54. SPG21 ENSGALG00000007262 8050 0.944 - - - - 0.944 - - - - - SPG21, maspardin [Source:NCBI gene;Acc:415526]
55. MCM4 ENSGALG00000012915 13151 0.944 - - - - 0.944 - - - - - minichromosome maintenance complex component 4
56. OAF ENSGALG00000006715 12518 0.944 - - - - 0.944 - - - - - out at first homolog [Source:NCBI gene;Acc:395161]
57. AGPAT3 ENSGALG00000031932 6903 0.944 - - - - 0.944 - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:326]
58. NUP37 ENSGALG00000012759 9985 0.943 - - - - 0.943 - - - - - nucleoporin 37 [Source:NCBI gene;Acc:418093]
59. C4orf27 C4orf27 16724 0.943 - - - - 0.943 - - - - -
60. CENPE ENSGALG00000013208 12337 0.943 - - - - 0.943 - - - - - centromere protein E, transcript variant X4
61. TCF7L2 ENSGALG00000008883 13688 0.943 - - - - 0.943 - - - - - transcription factor 7-like 2 (T-cell specific, HMG-box) [Source:NCBI gene;Acc:395508]
62. RAB21 ENSGALG00000010183 7718 0.942 - - - - 0.942 - - - - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
63. NSG1 ENSGALG00000015010 5829 0.94 - - - - 0.940 - - - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
64. ENSGALG00000026041 ENSGALG00000026041 13390 0.939 - - - - 0.939 - - - - -
65. FAM98A ENSGALG00000010428 9585 0.938 - - - - 0.938 - - - - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
66. CDC5L ENSGALG00000016704 22893 0.937 - - - - 0.937 - - - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
67. MORN4 ENSGALG00000006149 7772 0.937 - - - - 0.937 - - - - - MORN repeat containing 4 [Source:NCBI gene;Acc:425290]
68. EPFIP1L ENSGALG00000007683 18050 0.937 - - - - 0.937 - - - - - re-mRNA 3'-end-processing factor FIP1-like, transcript variant X2
69. HOXB3 ENSGALG00000043219 5198 0.935 - - - - 0.935 - - - - - homeobox B3 [Source:NCBI gene;Acc:395502]
70. ABCF2 ENSGALG00000034573 15639 0.935 - - - - 0.935 - - - - - ATP binding cassette subfamily F member 2 [Source:NCBI gene;Acc:426038]
71. INCENP ENSGALG00000007537 16617 0.933 - - - - 0.933 - - - - - inner centromere protein [Source:NCBI gene;Acc:396270]
72. SMC3 ENSGALG00000008585 16618 0.932 - - - - 0.932 - - - - - structural maintenance of chromosomes 3 [Source:NCBI gene;Acc:395188]
73. MTF2 ENSGALG00000043087 15225 0.932 - - - - 0.932 - - - - - metal response element binding transcription factor 2 [Source:NCBI gene;Acc:395174]
74. SAMM50 ENSGALG00000014194 20437 0.932 - - - - 0.932 - - - - - SAMM50 sorting and assembly machinery component [Source:NCBI gene;Acc:418234]
75. ZEB1 ENSGALG00000007260 9277 0.93 - - - - 0.930 - - - - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
76. CWC22 ENSGALG00000009001 5984 0.928 - - - - 0.928 - - - - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
77. EIF3L ENSGALG00000012296 42627 0.925 - - - - 0.925 - - - - - eukaryotic translation initiation factor 3 subunit L [Source:NCBI gene;Acc:418033]
78. EIF3H ENSGALG00000040522 39919 0.923 - - - - 0.923 - - - - - eukaryotic translation initiation factor 3 subunit H [Source:NCBI gene;Acc:420288]
79. SMNDC1 ENSGALG00000008561 14415 0.921 - - - - 0.921 - - - - - survival motor neuron domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16900]
80. ENSGALG00000000360 ENSGALG00000000360 15320 0.917 - - - - 0.917 - - - - -
81. GPI ENSGALG00000004956 40030 0.897 - - - - 0.897 - - - - - glucose-6-phosphate isomerase [Source:NCBI gene;Acc:415783]
82. PAX-7 PAX-7 3856 0.894 - - - - 0.894 - - - - -
83. H3-IX_1 H3-IX_1 54392 0.893 - - - - 0.893 - - - - -
84. RUNX1T1 ENSGALG00000033091 17529 0.892 - - - - 0.892 - - - - - RUNX1 translocation partner 1 [Source:NCBI gene;Acc:395503]
85. ENSGALG00000012451 ENSGALG00000012451 7912 0.89 - - - - - - 0.890 - - -
86. HES6 ENSGALG00000028415 4830 0.889 - - - - - - 0.889 - - - hes family bHLH transcription factor 6
87. LOC107057078 ENSGALG00000004725 28489 0.889 - - - - - - 0.889 - - - acyl-CoA dehydrogenase family member 10-like, transcript variant X7
88. PPP6R3 ENSGALG00000007037 10919 0.889 - - - - - - 0.889 - - - protein phosphatase 6 regulatory subunit 3 [Source:NCBI gene;Acc:423116]
89. DOCK1 ENSGALG00000042259 5438 0.889 - - - - - - 0.889 - - - dedicator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:2987]
90. HUNK ENSGALG00000015879 7227 0.889 - - - - - - 0.889 - - - hormonally up-regulated Neu-associated kinase [Source:HGNC Symbol;Acc:HGNC:13326]
91. NAT10 ENSGALG00000014573 12754 0.889 - - - - - - 0.889 - - - N-acetyltransferase 10 [Source:NCBI gene;Acc:426609]
92. MRPL3 ENSGALG00000040873 21053 0.889 - - - - - - 0.889 - - - mitochondrial ribosomal protein L3 [Source:NCBI gene;Acc:420686]
93. NDUFA2 ENSGALG00000040626 27899 0.889 - - - - - - 0.889 - - - NADH:ubiquinone oxidoreductase subunit A2 [Source:NCBI gene;Acc:768860]
94. SNTB1 ENSGALG00000034528 3907 0.889 - - - - - - 0.889 - - - syntrophin beta 1 [Source:NCBI gene;Acc:404774]
95. IMMT ENSGALG00000015783 25009 0.889 - - - - - - 0.889 - - - inner membrane mitochondrial protein [Source:NCBI gene;Acc:422912]
96. ITGB5 ENSGALG00000029766 5978 0.889 - - - - - - 0.889 - - - integrin subunit beta 5 [Source:NCBI gene;Acc:395142]
97. SKP1 ENSGALG00000006474 37807 0.888 - - - - - - 0.888 - - - S-phase kinase-associated protein 1 [Source:NCBI gene;Acc:416319]
98. AHCY ENSGALG00000033677 35555 0.888 - - - - 0.888 - - - - - adenosylhomocysteinase [Source:HGNC Symbol;Acc:HGNC:343]
99. ATP5C1 53961 0.884 - - - - 0.884 - - - - - ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant X1
100. XRN2 ENSGALG00000008372 22164 0.881 - - - - 0.881 - - - - - 5'-3' exoribonuclease 2 [Source:NCBI gene;Acc:421236]

There are 58 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA