Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RPS3A

Gene Name Gene ID Reads Annotation
RPS3A ENSGALG00000010077 292185 ribosomal protein S3A [Source:NCBI gene;Acc:422477]











Genes with expression patterns similar to RPS3A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RPS3A ENSGALG00000010077 292185 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein S3A [Source:NCBI gene;Acc:422477]
2. ZNF593 ENSGALG00000000542 79105 1.577 - - 0.706 - - - 0.871 - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
3. MRPS17 ENSGALG00000002379 30243 1.569 - - - - - - 0.821 - - 0.748 mitochondrial ribosomal protein S17 [Source:NCBI gene;Acc:417538]
4. NOP58 ENSGALG00000008454 34630 1.485 - - - - - - 0.783 0.702 - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
5. CLN8 ENSGALG00000039606 4209 1.413 - - 0.708 - - - 0.705 - - - CLN8, transmembrane ER and ERGIC protein [Source:NCBI gene;Acc:421902]
6. COX7C ENSGALG00000027963 84312 0.937 - - - - - - 0.937 - - - cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
7. RPL36AL ENSGALG00000004952 205590 0.928 - - - - - - 0.928 - - - ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
8. RBMX ENSGALG00000006457 34009 0.92 - - - - - - 0.920 - - - RNA binding motif protein X-linked [Source:NCBI gene;Acc:422248]
9. YWHAZ ENSGALG00000031387 84985 0.898 - - - - - - 0.898 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
10. EIF4A2 ENSGALG00000008684 58507 0.894 - - - - - - 0.894 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
11. GLRX3 ENSGALG00000010464 22578 0.89 - - - - - - 0.890 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
12. MRPL54 ENSGALG00000027611 39450 0.889 - - - - - - 0.889 - - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
13. RANBP1 ENSGALG00000002107 17715 0.884 - - - - - - 0.884 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
14. MCTS1 ENSGALG00000008517 27514 0.881 - - - - - - 0.881 - - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
15. EIF2B EIF2B 28702 0.878 - - - - - - 0.878 - - -
16. SNRNP40 ENSGALG00000000615 32298 0.876 - - - - - - 0.876 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
17. HN1 HN1 34386 0.875 - - - - - - 0.875 - - -
18. SMC4 ENSGALG00000009553 15715 0.875 - - - - - - 0.875 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
19. NDUFA12 ENSGALG00000011325 19807 0.875 - - - - - - 0.875 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
20. RBBP4 ENSGALG00000003522 72455 0.872 - - - - - - 0.872 - - - RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]
21. PRPF8 ENSGALG00000002943 31189 0.871 - - - - - - 0.871 - - - pre-mRNA processing factor 8 [Source:HGNC Symbol;Acc:HGNC:17340]
22. ACO2 ENSGALG00000011950 30387 0.871 - - - - - - 0.871 - - - aconitase 2 [Source:NCBI gene;Acc:374009]
23. CASP3 ENSGALG00000010638 11572 0.865 - - - - - - 0.865 - - - caspase 3 [Source:NCBI gene;Acc:395476]
24. TRAPPC2 ENSGALG00000016578 8749 0.865 - - - - - - 0.865 - - - trafficking protein particle complex 2 [Source:NCBI gene;Acc:418634]
25. GLO1 ENSGALG00000010127 31662 0.863 - - - - - - 0.863 - - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
26. SPCS3 ENSGALG00000010839 19106 0.862 - - - - - - 0.862 - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
27. LLPH ENSGALG00000019358 20976 0.862 - - - - - - 0.862 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
28. HSPA4 ENSGALG00000040882 20966 0.86 - - - - - - 0.860 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
29. AP2A2 ENSGALG00000006799 13874 0.859 - - - - - - 0.859 - - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
30. ENY2 ENSGALG00000036618 30314 0.858 - - - - - - 0.858 - - - ENY2, transcription and export complex 2 subunit [Source:NCBI gene;Acc:420275]
31. RPL12 ENSGALG00000008806 229862 0.857 - - - - - - 0.857 - - - ribosomal protein L12 [Source:NCBI gene;Acc:417264]
32. PARP1 ENSGALG00000009228 39433 0.856 - - - - - - 0.856 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
33. AIMP2 ENSGALG00000003400 12655 0.856 - - - - - - 0.856 - - - aminoacyl tRNA synthetase complex interacting multifunctional protein 2 [Source:HGNC Symbol;Acc:HGNC:20609]
34. GSPT1 15580 0.855 - - - - - - 0.855 - - - G1 to S phase transition 1, transcript variant X1
35. RPF2 ENSGALG00000037087 12788 0.855 - - - - - - 0.855 - - - ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
36. PSMD12 ENSGALG00000026225 17473 0.853 - - - - - - 0.853 - - - proteasome 26S subunit, non-ATPase 12 [Source:NCBI gene;Acc:417425]
37. SRRM1 ENSGALG00000001283 23820 0.853 - - - - - - 0.853 - - - serine and arginine repetitive matrix 1 [Source:NCBI gene;Acc:428216]
38. LSM5 ENSGALG00000041625 22307 0.853 - - - - - - 0.853 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
39. RABGGTB ENSGALG00000011388 11654 0.85 - - - - - - 0.850 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
40. VBP1 VBP1 14482 0.848 - - - - - - 0.848 - - -
41. TMEM167A ENSGALG00000027332 13862 0.848 - - - - - - 0.848 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
42. RIOK2 ENSGALG00000015288 6280 0.847 - - - - - - 0.847 - - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
43. MED17 ENSGALG00000017218 5821 0.847 - - - - - - 0.847 - - - mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
44. DERL1 ENSGALG00000033950 15074 0.847 - - - - - - 0.847 - - - derlin 1 [Source:NCBI gene;Acc:420350]
45. UTP11L UTP11L 11927 0.846 - - - - - - 0.846 - - -
46. RUVBL1 ENSGALG00000005931 9379 0.846 - - - - - - 0.846 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
47. MRPL50 ENSGALG00000015543 11649 0.845 - - - - - - 0.845 - - - mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
48. RANGAP1 ENSGALG00000011966 20170 0.842 - - - - - - 0.842 - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
49. SKAP2 ENSGALG00000030081 13746 0.839 - - - - - - 0.839 - - - src kinase associated phosphoprotein 2 [Source:HGNC Symbol;Acc:HGNC:15687]
50. FARSB ENSGALG00000005236 10738 0.838 - - - - - - 0.838 - - - phenylalanyl-tRNA synthetase subunit beta [Source:NCBI gene;Acc:424812]
51. SKP2 ENSGALG00000003547 14637 0.837 - - - - - - 0.837 - - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
52. ENSGALG00000017396 ENSGALG00000017396 9028 0.837 - - - - - - 0.837 - - -
53. LMAN1 ENSGALG00000034821 12788 0.836 - - - - - - 0.836 - - - lectin, mannose binding 1 [Source:NCBI gene;Acc:426849]
54. SCCPDH ENSGALG00000010641 8624 0.836 - - - - - - 0.836 - - - saccharopine dehydrogenase (putative) [Source:NCBI gene;Acc:421485]
55. METAP2 ENSGALG00000011377 16311 0.836 - - - - - - 0.836 - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
56. NOC4L ENSGALG00000002272 9644 0.836 - - - - - - 0.836 - - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
57. GOLGA7 ENSGALG00000003483 26525 0.835 - - - - - - 0.835 - - - golgin A7 [Source:NCBI gene;Acc:426787]
58. FCF1 ENSGALG00000010275 24928 0.835 - - - - - - 0.835 - - - FCF1, rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]
59. KDM5B ENSGALG00000038948 50645 0.835 - - - - - - 0.835 - - - lysine demethylase 5B [Source:NCBI gene;Acc:421168]
60. SF3A2 ENSGALG00000021679 12580 0.834 - - - - - - 0.834 - - - splicing factor 3a subunit 2 [Source:NCBI gene;Acc:420077]
61. PSMD3 ENSGALG00000033162 25615 0.834 - - - - - - 0.834 - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
62. WDR43 ENSGALG00000032529 12235 0.834 - - - - - - 0.834 - - - WD repeat domain 43 [Source:NCBI gene;Acc:421295]
63. MAP3K7 ENSGALG00000015596 15164 0.833 - - - - - - 0.833 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
64. MRPL20 ENSGALG00000001542 28764 0.833 - - - - - - 0.833 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
65. C1QBP ENSGALG00000001654 34814 0.833 - - - - - - 0.833 - - - complement C1q binding protein [Source:HGNC Symbol;Acc:HGNC:1243]
66. CZH9ORF80 CZH9ORF80 12760 0.833 - - - - - - 0.833 - - -
67. NUP50 ENSGALG00000014222 11743 0.833 - - - - - - 0.833 - - - nucleoporin 50 [Source:NCBI gene;Acc:418240]
68. PLRG1 ENSGALG00000009257 8613 0.832 - - - - - - 0.832 - - - pleiotropic regulator 1 [Source:HGNC Symbol;Acc:HGNC:9089]
69. BRP44 BRP44 17093 0.832 - - - - - - 0.832 - - -
70. PSMB2 ENSGALG00000026421 51885 0.832 - - - - - - 0.832 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
71. ATG3 ENSGALG00000015204 11277 0.832 - - - - - - 0.832 - - - autophagy related 3 [Source:NCBI gene;Acc:418369]
72. C4H4ORF52 C4H4ORF52 8116 0.832 - - - - - - 0.832 - - -
73. RAD21 ENSGALG00000029523 25658 0.831 - - - - - - 0.831 - - - RAD21 cohesin complex component [Source:NCBI gene;Acc:420286]
74. TFB2M ENSGALG00000010651 4374 0.831 - - - - - - 0.831 - - - transcription factor B2, mitochondrial
75. ID1 ENSGALG00000034661 44524 0.83 - - - - - - 0.830 - - - inhibitor of DNA binding 1, HLH protein [Source:NCBI gene;Acc:395282]
76. NDUFV2 ENSGALG00000036625 29234 0.83 - - - - - - 0.830 - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]
77. UCHL3 ENSGALG00000016921 16208 0.829 - - - - - - 0.829 - - - ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
78. BMS1 ENSGALG00000002624 8339 0.829 - - - - - - 0.829 - - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
79. EIF2B3 ENSGALG00000010140 7992 0.829 - - - - - - 0.829 - - - eukaryotic translation initiation factor 2B subunit gamma [Source:NCBI gene;Acc:424587]
80. TXNDC17 ENSGALG00000027950 45004 0.829 - - - - - - 0.829 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
81. C11H16ORF80 C11H16ORF80 18673 0.829 - - - - - - 0.829 - - -
82. PSPC1 ENSGALG00000017142 13036 0.828 - - - - - - 0.828 - - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
83. SSR3 ENSGALG00000028683 24334 0.828 - - - - - - 0.828 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
84. PRELID1 ENSGALG00000002990 55592 0.828 - - - - - - 0.828 - - - PRELI domain containing 1 [Source:NCBI gene;Acc:395819]
85. TMPO ENSGALG00000011504 14454 0.825 - - - - - - 0.825 - - - thymopoietin [Source:NCBI gene;Acc:417923]
86. R3HDM1 ENSGALG00000012246 6580 0.825 - - - - - - 0.825 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
87. KIF2C ENSGALG00000010120 8999 0.825 - - - - - - 0.825 - - - kinesin family member 2C, transcript variant X1
88. BSG ENSGALG00000001328 37947 0.825 - - - - - - 0.825 - - - basigin (Ok blood group) [Source:NCBI gene;Acc:770363]
89. GPC4 ENSGALG00000006080 56498 0.825 - - - - - - 0.825 - - - glypican 4 [Source:HGNC Symbol;Acc:HGNC:4452]
90. PREP ENSGALG00000015405 17050 0.825 - - - - - - 0.825 - - - prolyl endopeptidase [Source:NCBI gene;Acc:421785]
91. C17H9ORF16 C17H9ORF16 7908 0.824 - - - - - - 0.824 - - -
92. SLC25A3 ENSGALG00000011514 62606 0.824 - - - - - - 0.824 - - - solute carrier family 25 member 3 [Source:NCBI gene;Acc:417924]
93. TALDO1 ENSGALG00000037195 30673 0.824 - - - - - - 0.824 - - - transaldolase 1 [Source:NCBI gene;Acc:423019]
94. RPL35 ENSGALG00000035677 252113 0.823 - - - - - - 0.823 - - - ribosomal protein L35 [Source:NCBI gene;Acc:374133]
95. SPCS1 ENSGALG00000001655 7718 0.823 - - - - - - 0.823 - - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
96. RBM17 ENSGALG00000006332 12656 0.823 - - - - - - 0.823 - - - RNA binding motif protein 17 [Source:HGNC Symbol;Acc:HGNC:16944]
97. PSMB7 ENSGALG00000001103 42683 0.823 - - - - - - 0.823 - - - proteasome subunit beta 7 [Source:NCBI gene;Acc:378915]
98. TUBB2C TUBB2C 44249 0.823 - - - - - - 0.823 - - -
99. PES1 ENSGALG00000007778 12248 0.822 - - - - - - 0.822 - - - pescadillo ribosomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8848]
100. ILF2 ENSGALG00000011570 23050 0.822 - - - - - - 0.822 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]

There are 752 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA