Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RPS28

Gene Name Gene ID Reads Annotation
RPS28 ENSGALG00000024398 244056 ribosomal protein S28 [Source:NCBI gene;Acc:768930]











Genes with expression patterns similar to RPS28

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RPS28 ENSGALG00000024398 244056 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein S28 [Source:NCBI gene;Acc:768930]
2. UQCRC2 ENSGALG00000002490 23477 1.576 - - - - - - 0.746 0.830 - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
3. PTEN ENSGALG00000003634 5048 1.525 - - - - - - 0.723 0.802 - - phosphatase and tensin homolog [Source:HGNC Symbol;Acc:HGNC:9588]
4. ARPC4 ENSGALG00000006691 33311 1.524 0.777 0.747 - - - - - - - - actin related protein 2/3 complex subunit 4 [Source:NCBI gene;Acc:416051]
5. SETD9 ENSGALG00000014719 5081 1.464 - - - - - - 0.763 0.701 - - SET domain containing 9, transcript variant X2
6. CUL3 ENSGALG00000005108 9571 0.884 - - - - - - 0.884 - - - cullin 3 [Source:HGNC Symbol;Acc:HGNC:2553]
7. SMC4 ENSGALG00000009553 15715 0.884 - - - - - - 0.884 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
8. UBE2V1 ENSGALG00000008015 17947 0.877 - - - - - - 0.877 - - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
9. YWHAZ ENSGALG00000031387 84985 0.874 - - - - - - 0.874 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
10. RABGGTB ENSGALG00000011388 11654 0.87 - - - - - - 0.870 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
11. SKP2 ENSGALG00000003547 14637 0.867 - - - - - - 0.867 - - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
12. ACTR2 ENSGALG00000008779 17812 0.865 - - - - - - 0.865 - - - ARP2 actin related protein 2 homolog [Source:NCBI gene;Acc:396147]
13. FANCL ENSGALG00000030022 7423 0.863 - - - - - - 0.863 - - - FA complementation group L [Source:NCBI gene;Acc:421202]
14. HARS ENSGALG00000035080 11602 0.86 - - - - - - 0.860 - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
15. METAP2 ENSGALG00000011377 16311 0.858 - - - - - - 0.858 - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
16. TSC22D2 ENSGALG00000027591 6594 0.858 - - - - - - 0.858 - - - TSC22 domain family member 2 [Source:HGNC Symbol;Acc:HGNC:29095]
17. EBNA1BP2 ENSGALG00000009045 17453 0.857 - - - - - - 0.857 - - - EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
18. SPINZ SPINZ 10341 0.854 - - - - - - 0.854 - - -
19. NDUFA12 ENSGALG00000011325 19807 0.853 - - - - - - 0.853 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
20. PSMB2 ENSGALG00000026421 51885 0.852 - - - - - - 0.852 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
21. RPF2 ENSGALG00000037087 12788 0.851 - - - - - - 0.851 - - - ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
22. HNRNPD ENSGALG00000011184 10686 0.849 - - - - - - 0.849 - - - heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
23. CTBP1 ENSGALG00000039942 9383 0.847 - - - - - - 0.847 - - - C-terminal binding protein 1 [Source:NCBI gene;Acc:422904]
24. CBLL1 ENSGALG00000038981 6725 0.847 - - - - - - 0.847 - - - Cbl proto-oncogene like 1 [Source:NCBI gene;Acc:417701]
25. RBM17 ENSGALG00000006332 12656 0.846 - - - - - - 0.846 - - - RNA binding motif protein 17 [Source:HGNC Symbol;Acc:HGNC:16944]
26. LLPH ENSGALG00000019358 20976 0.846 - - - - - - 0.846 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
27. MRPL20 ENSGALG00000001542 28764 0.845 - - - - - - 0.845 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
28. EIF4A2 ENSGALG00000008684 58507 0.844 - - - - - - 0.844 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
29. TNFAIP8L1 ENSGALG00000004266 12611 0.843 - - - - - - 0.843 - - - TNF alpha induced protein 8 like 1 [Source:NCBI gene;Acc:420162]
30. ATP5L ENSGALG00000006899 69561 0.843 - - - - - - 0.843 - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit G
31. GPC4 ENSGALG00000006080 56498 0.843 - - - - - - 0.843 - - - glypican 4 [Source:HGNC Symbol;Acc:HGNC:4452]
32. HNRNPH1 HNRNPH1 8819 0.839 - - - - - - - 0.839 - -
33. COX7C ENSGALG00000027963 84312 0.838 - - - - - - 0.838 - - - cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
34. GLRX3 ENSGALG00000010464 22578 0.838 - - - - - - 0.838 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
35. RANBP1 ENSGALG00000002107 17715 0.838 - - - - - - 0.838 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
36. GRPEL1 ENSGALG00000015549 11246 0.838 - - - - - - 0.838 - - - GrpE like 1, mitochondrial [Source:NCBI gene;Acc:422865]
37. BRP44 BRP44 17093 0.838 - - - - - - 0.838 - - -
38. ZNF593 ENSGALG00000000542 79105 0.837 - - - - - - 0.837 - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
39. SPCS3 ENSGALG00000010839 19106 0.836 - - - - - - 0.836 - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
40. WBSCR22 6082 0.836 - - - - - - 0.836 - - - Williams-Beuren syndrome chromosome region 22
41. DKC1 ENSGALG00000005054 30350 0.835 - - - - - - 0.835 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
42. EIF2B3 ENSGALG00000010140 7992 0.835 - - - - - - 0.835 - - - eukaryotic translation initiation factor 2B subunit gamma [Source:NCBI gene;Acc:424587]
43. CCNH ENSGALG00000015641 8051 0.834 - - - - - - 0.834 - - - cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
44. HDDC2 ENSGALG00000014841 7674 0.834 - - - - - - 0.834 - - - HD domain containing 2 [Source:NCBI gene;Acc:421719]
45. RANGAP1 ENSGALG00000011966 20170 0.834 - - - - - - 0.834 - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
46. ENSGALG00000017396 ENSGALG00000017396 9028 0.834 - - - - - - 0.834 - - -
47. MRPL53 ENSGALG00000037867 6100 0.834 - - - - - - 0.834 - - - mitochondrial ribosomal protein L53 [Source:NCBI gene;Acc:420196]
48. SMDT1 ENSGALG00000011897 9360 0.833 - - - - - - 0.833 - - - single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
49. OSTC ENSGALG00000010526 19422 0.833 - - - - - - 0.833 - - - oligosaccharyltransferase complex non-catalytic subunit [Source:NCBI gene;Acc:422525]
50. TMED2 ENSGALG00000003307 20704 0.832 - - - - - - 0.832 - - - transmembrane p24 trafficking protein 2 [Source:NCBI gene;Acc:416821]
51. ENY2 ENSGALG00000036618 30314 0.832 - - - - - - 0.832 - - - ENY2, transcription and export complex 2 subunit [Source:NCBI gene;Acc:420275]
52. ATG3 ENSGALG00000015204 11277 0.832 - - - - - - 0.832 - - - autophagy related 3 [Source:NCBI gene;Acc:418369]
53. HMGB2 ENSGALG00000010745 89235 0.831 - - - - - - 0.831 - - - high mobility group box 2 [Source:NCBI gene;Acc:396482]
54. RIOK2 ENSGALG00000015288 6280 0.83 - - - - - - 0.830 - - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
55. RBBP4 ENSGALG00000003522 72455 0.83 - - - - - - 0.830 - - - RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]
56. MAP2K4 ENSGALG00000032178 5982 0.829 - - - - - - 0.829 - - - mitogen-activated protein kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6844]
57. CLNS1A ENSGALG00000008574 25675 0.828 - - - - - - 0.828 - - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
58. HSPA4 ENSGALG00000040882 20966 0.828 - - - - - - 0.828 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
59. GLO1 ENSGALG00000010127 31662 0.827 - - - - - - 0.827 - - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
60. RAB10 ENSGALG00000016535 5272 0.827 - - - - - - 0.827 - - - RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
61. MRPL54 ENSGALG00000027611 39450 0.827 - - - - - - 0.827 - - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
62. TARDBP ENSGALG00000002906 24748 0.827 - - - - - - 0.827 - - - TAR DNA binding protein [Source:NCBI gene;Acc:419453]
63. PTPMT1 ENSGALG00000008091 6160 0.827 - - - - - - 0.827 - - - protein tyrosine phosphatase, mitochondrial 1 [Source:NCBI gene;Acc:423181]
64. EGLN1 ENSGALG00000041422 11032 0.827 - - - - - - 0.827 - - - egl-9 family hypoxia inducible factor 1 [Source:HGNC Symbol;Acc:HGNC:1232]
65. THOP1 ENSGALG00000041934 10122 0.825 - - - - - - 0.825 - - - thimet oligopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:11793]
66. MOXD1 ENSGALG00000002911 8523 0.824 - - - - - - - 0.824 - - monooxygenase DBH like 1 [Source:NCBI gene;Acc:395333]
67. MAP3K7 ENSGALG00000015596 15164 0.822 - - - - - - 0.822 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
68. CENPW ENSGALG00000027454 7517 0.822 - - - - - - 0.822 - - - centromere protein W [Source:NCBI gene;Acc:421716]
69. GABARAPL2 ENSGALG00000003208 9195 0.822 - - - - - - 0.822 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
70. PTCD3 ENSGALG00000015773 3059 0.822 - - - - - - 0.822 - - - pentatricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:24717]
71. TAF3 ENSGALG00000006731 15569 0.821 - - - - - - 0.821 - - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
72. PARP1 ENSGALG00000009228 39433 0.821 - - - - - - 0.821 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
73. MAB21L1 ENSGALG00000045052 1677 0.821 - - - - - - - 0.821 - - mab-21 like 1 [Source:NCBI gene;Acc:395208]
74. MRPL24 ENSGALG00000030994 24264 0.82 - - - - - - 0.820 - - - mitochondrial ribosomal protein L24 [Source:HGNC Symbol;Acc:HGNC:14037]
75. RTCB ENSGALG00000012611 14360 0.82 - - - - - - 0.820 - - - RNA 2',3'-cyclic phosphate and 5'-OH ligase [Source:HGNC Symbol;Acc:HGNC:26935]
76. CMPK CMPK 9569 0.82 - - - - - - 0.820 - - -
77. TMEM167A ENSGALG00000027332 13862 0.819 - - - - - - 0.819 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
78. SDHD ENSGALG00000007878 25129 0.819 - - - - - - 0.819 - - - succinate dehydrogenase complex subunit D [Source:NCBI gene;Acc:419793]
79. DERL1 ENSGALG00000033950 15074 0.819 - - - - - - 0.819 - - - derlin 1 [Source:NCBI gene;Acc:420350]
80. TOR1AIP1 ENSGALG00000029238 5843 0.818 - - - - - - 0.818 - - - torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
81. CLTCL1 ENSGALG00000041760 9351 0.818 - - - - - - 0.818 - - - clathrin, heavy chain-like 1, transcript variant X6
82. BET1L ENSGALG00000004172 5305 0.817 - - - - - - 0.817 - - - Bet1 golgi vesicular membrane trafficking protein like [Source:NCBI gene;Acc:422985]
83. C11H16ORF80 C11H16ORF80 18673 0.817 - - - - - - 0.817 - - -
84. CRTAP ENSGALG00000034163 6453 0.817 - - - - - - 0.817 - - - cartilage associated protein [Source:NCBI gene;Acc:395992]
85. NDUFAF2 ENSGALG00000027564 7302 0.817 - - - - - - 0.817 - - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:NCBI gene;Acc:769549]
86. APIP ENSGALG00000031286 6838 0.817 - - - - - - 0.817 - - - APAF1 interacting protein [Source:NCBI gene;Acc:428860]
87. EHD3 ENSGALG00000009086 14407 0.816 - - - - - - 0.816 - - - EH domain containing 3 [Source:NCBI gene;Acc:421306]
88. METTL23 ENSGALG00000001790 7906 0.816 - - - - - - 0.816 - - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
89. ILF2 ENSGALG00000011570 23050 0.816 - - - - - - 0.816 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
90. AIMP2 ENSGALG00000003400 12655 0.815 - - - - - - 0.815 - - - aminoacyl tRNA synthetase complex interacting multifunctional protein 2 [Source:HGNC Symbol;Acc:HGNC:20609]
91. ADSL ENSGALG00000012034 10280 0.815 - - - - - - 0.815 - - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
92. NDUFS1 ENSGALG00000008606 7898 0.815 - - - - - - 0.815 - - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:NCBI gene;Acc:424102]
93. CSE1L ENSGALG00000004707 20653 0.815 - - - - - - 0.815 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
94. MED17 ENSGALG00000017218 5821 0.814 - - - - - - 0.814 - - - mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
95. KIF2C ENSGALG00000010120 8999 0.814 - - - - - - 0.814 - - - kinesin family member 2C, transcript variant X1
96. TK2 ENSGALG00000034216 5394 0.814 - - - - - - 0.814 - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
97. ZNHIT3 ENSGALG00000026031 8652 0.814 - - - - - - 0.814 - - - zinc finger HIT-type containing 3 [Source:HGNC Symbol;Acc:HGNC:12309]
98. TMX3 ENSGALG00000013757 6387 0.813 - - - - - - 0.813 - - - Gallus gallus thioredoxin related transmembrane protein 3 (TMX3), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001321606]
99. UQCRH ENSGALG00000017380 55734 0.813 - - - - - - 0.813 - - - ubiquinol-cytochrome c reductase hinge protein [Source:NCBI gene;Acc:771939]
100. ST5 6869 0.813 - - - - - - 0.813 - - - suppression of tumorigenicity 5, transcript variant X1

There are 625 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA