Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RPS25

Gene Name Gene ID Reads Annotation
RPS25 ENSGALG00000007699 156127 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]











Genes with expression patterns similar to RPS25

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RPS25 ENSGALG00000007699 156127 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
2. ST13 ENSGALG00000012007 25670 1.644 - - - - 0.732 - 0.912 - - - ST13, Hsp70 interacting protein [Source:NCBI gene;Acc:418003]
3. RPL37 ENSGALG00000014833 177366 1.559 - - - - - 0.739 - - - 0.820 ribosomal protein L37 [Source:NCBI gene;Acc:427186]
4. RPL38 ENSGALG00000001465 263470 1.491 - - - - 0.747 0.744 - - - - ribosomal protein L38 [Source:NCBI gene;Acc:771528]
5. SNRPB2 28675 0.944 - - - - - - 0.944 - - - small nuclear ribonucleoprotein polypeptide B2
6. PRDX1 ENSGALG00000010243 151918 0.937 - - - - - - 0.937 - - - peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
7. PELI1 ENSGALG00000008837 11561 0.929 - - - - - - 0.929 - - - pellino E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421279]
8. HNRNPU ENSGALG00000010671 56560 0.928 - - - - - - 0.928 - - - heterogeneous nuclear ribonucleoprotein U [Source:HGNC Symbol;Acc:HGNC:5048]
9. ZDHHC6 ENSGALG00000008870 16575 0.924 - - - - - - 0.924 - - - zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
10. BUB3 ENSGALG00000009681 36055 0.921 - - - - - - 0.921 - - - BUB3, mitotic checkpoint protein [Source:NCBI gene;Acc:423949]
11. HDLBP ENSGALG00000005823 24636 0.921 - - - - - - 0.921 - - - high density lipoprotein binding protein [Source:NCBI gene;Acc:395984]
12. CCT5 ENSGALG00000013041 56190 0.918 - - - - - - 0.918 - - - chaperonin containing TCP1 subunit 5 [Source:NCBI gene;Acc:420930]
13. MRPS26 ENSGALG00000014118 27422 0.917 - - - - - - 0.917 - - - mitochondrial ribosomal protein S26 [Source:NCBI gene;Acc:426561]
14. ENSGALG00000013825 ENSGALG00000013825 16473 0.915 - - - - - - 0.915 - - -
15. WLS ENSGALG00000011238 20969 0.915 - - - - - - 0.915 - - - wntless Wnt ligand secretion mediator [Source:NCBI gene;Acc:424707]
16. TRA2A ENSGALG00000010973 37101 0.914 - - - - - - 0.914 - - - transformer 2 alpha homolog [Source:NCBI gene;Acc:420618]
17. BRIX1 ENSGALG00000003373 27878 0.913 - - - - - - 0.913 - - - BRX1, biogenesis of ribosomes [Source:NCBI gene;Acc:427433]
18. ENSGALG00000000360 ENSGALG00000000360 15320 0.907 - - - - - - 0.907 - - -
19. ARGLU1 ENSGALG00000016855 25633 0.901 - - - - - - 0.901 - - - arginine and glutamate rich 1 [Source:NCBI gene;Acc:418765]
20. UBE2N ENSGALG00000030515 32059 0.899 - - - - - - 0.899 - - - ubiquitin conjugating enzyme E2 N [Source:NCBI gene;Acc:417898]
21. MRPS34 ENSGALG00000001792 14262 0.898 - - - - - - 0.898 - - - mitochondrial ribosomal protein S34 [Source:NCBI gene;Acc:426987]
22. TBL1X ENSGALG00000040006 28597 0.895 - - - - - - 0.895 - - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
23. CKAP4 ENSGALG00000012659 36398 0.89 - - - - - - 0.890 - - - cytoskeleton associated protein 4 [Source:HGNC Symbol;Acc:HGNC:16991]
24. MRPS36 ENSGALG00000014789 7584 0.888 - - - - - - 0.888 - - - mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]
25. CDC5L ENSGALG00000016704 22893 0.887 - - - - - - 0.887 - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
26. MOB4 ENSGALG00000008128 10322 0.887 - - - - - - 0.887 - - - MOB family member 4, phocein [Source:NCBI gene;Acc:429007]
27. CNBP 42704 0.886 - - - - - - 0.886 - - - CCHC-type zinc finger nucleic acid binding protein, transcript variant X7
28. RPF1 ENSGALG00000008796 9809 0.884 - - - - - - 0.884 - - - ribosome production factor 1 homolog
29. MRPS15 ENSGALG00000044433 15356 0.884 - - - - - - 0.884 - - - mitochondrial ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:14504]
30. NOB1 ENSGALG00000000693 15442 0.883 - - - - - - 0.883 - - - NIN1 (RPN12) binding protein 1 homolog [Source:HGNC Symbol;Acc:HGNC:29540]
31. ABRACL ENSGALG00000013826 19445 0.883 - - - - - - 0.883 - - - ABRA C-terminal like [Source:NCBI gene;Acc:770205]
32. RNF13 ENSGALG00000010411 8749 0.883 - - - - - - 0.883 - - - ring finger protein 13 [Source:NCBI gene;Acc:396303]
33. ACTR6 ENSGALG00000040976 31271 0.873 - - - - - - 0.873 - - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
34. CCAR1 ENSGALG00000004108 13219 0.872 - - - - - - 0.872 - - - cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
35. POLB ENSGALG00000040828 7462 0.868 - - - - - - 0.868 - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
36. PPP3CB ENSGALG00000005243 8794 0.868 - - - - - - 0.868 - - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
37. POLR2C ENSGALG00000001168 10703 0.867 - - - - - - 0.867 - - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
38. CTNNBL1 ENSGALG00000006817 6765 0.866 - - - - - - 0.866 - - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
39. TPI1 ENSGALG00000014526 43273 0.866 - - - - - - 0.866 - - - triosephosphate isomerase 1 [Source:NCBI gene;Acc:396435]
40. FGD5 ENSGALG00000008546 4031 0.864 - - - - - - 0.864 - - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
41. SPINT1 ENSGALG00000008469 5735 0.863 - - - - - - 0.863 - - - serine peptidase inhibitor, Kunitz type 1, transcript variant X2
42. SEC61G ENSGALG00000037863 83362 0.862 - - - - - - 0.862 - - - Sec61 translocon gamma subunit [Source:NCBI gene;Acc:776639]
43. COMMD8 ENSGALG00000026279 13509 0.86 - - - - - - 0.860 - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
44. SERBP1 ENSGALG00000011229 30489 0.86 - - - - - - 0.860 - - - SERPINE1 mRNA binding protein 1 [Source:NCBI gene;Acc:424706]
45. USO1 ENSGALG00000010878 9506 0.859 - - - - - - 0.859 - - - USO1 vesicle transport factor [Source:NCBI gene;Acc:422575]
46. APITD1 APITD1 11830 0.859 - - - - - - 0.859 - - -
47. MYBL2 ENSGALG00000003503 15875 0.859 - - - - - - 0.859 - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
48. FHL3 ENSGALG00000035187 9753 0.856 - - - - - - 0.856 - - - four and a half LIM domains 3 [Source:HGNC Symbol;Acc:HGNC:3704]
49. NDUFA11 ENSGALG00000021692 75804 0.856 - - - - - - 0.856 - - - NADH:ubiquinone oxidoreductase subunit A11
50. ANLN 10479 0.853 - - - - - - 0.853 - - - anillin actin binding protein, transcript variant X2
51. LOC424109 ENSGALG00000008738 3932 0.851 - - - - - - 0.851 - - - alpha-aspartyl dipeptidase
52. GCAT ENSGALG00000012312 7906 0.846 - - - - - - 0.846 - - - glycine C-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:4188]
53. GLT8D1 ENSGALG00000001642 4232 0.846 - - - - - - 0.846 - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
54. DIS3 ENSGALG00000016930 3696 0.846 - - - - - - 0.846 - - - DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]
55. GALNTL4 GALNTL4 3548 0.845 - - - - - - 0.845 - - -
56. MMADHC ENSGALG00000012473 9026 0.845 - - - - - - 0.845 - - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
57. TP53INP1 ENSGALG00000041353 6890 0.845 - - - - - - 0.845 - - - tumor protein p53 inducible nuclear protein 1 [Source:NCBI gene;Acc:420232]
58. CCDC90B ENSGALG00000037072 5088 0.844 - - - - - - 0.844 - - - coiled-coil domain containing 90B [Source:HGNC Symbol;Acc:HGNC:28108]
59. C6H10ORF32 C6H10ORF32 7694 0.843 - - - - - - 0.843 - - -
60. EPHA3 ENSGALG00000015403 9811 0.842 - - - - - - 0.842 - - - EPH receptor A3 [Source:NCBI gene;Acc:396402]
61. TTF1 4214 0.842 - - - - - - 0.842 - - - transcription termination factor 1
62. EZH2 ENSGALG00000043399 15881 0.841 - - - - - - 0.841 - - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]
63. gga-mir-1723 ENSGALG00000025386 6662 0.84 - - - - - - 0.840 - - - gga-mir-1723 [Source:miRBase;Acc:MI0007460]
64. SH3RF3 ENSGALG00000016810 2169 0.84 - - - - - - 0.840 - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
65. EXOSC7 ENSGALG00000030084 8654 0.839 - - - - - - 0.839 - - - exosome component 7 [Source:NCBI gene;Acc:420704]
66. PSMD13 ENSGALG00000043684 14720 0.836 - - - - - - 0.836 - - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
67. ENSGALG00000006730 ENSGALG00000006730 3695 0.836 - - - - - - 0.836 - - -
68. DDX18 ENSGALG00000012147 12463 0.835 - - - - - - 0.835 - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
69. PRKG1 ENSGALG00000003805 4654 0.832 - - - - - - 0.832 - - - protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
70. ATPAF2 ENSGALG00000004926 3393 0.828 - - - - - - 0.828 - - - ATP synthase mitochondrial F1 complex assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:18802]
71. GDPD4 ENSGALG00000000690 824 0.828 - - - - - - 0.828 - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
72. GSDMA ENSGALG00000013495 1650 0.827 - - - - - - 0.827 - - - gasdermin A [Source:NCBI gene;Acc:426132]
73. ZNF276 ENSGALG00000000513 2410 0.827 - - - - - - 0.827 - - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
74. CHL1 ENSGALG00000037856 1565 0.827 - - - - - - 0.827 - - - cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
75. CRAC1A CRAC1A 5265 0.826 - - - - - - 0.826 - - -
76. SNAPIN ENSGALG00000026796 11155 0.826 - - - - - - 0.826 - - - SNAP associated protein [Source:HGNC Symbol;Acc:HGNC:17145]
77. LOC425795 ENSGALG00000027696 2357 0.825 - - - - - - 0.825 - - - ectoderm-neural cortex protein 1-like, transcript variant X1
78. DNAJC10 ENSGALG00000008862 3114 0.824 - - - - - - 0.824 - - - DnaJ heat shock protein family (Hsp40) member C10 [Source:HGNC Symbol;Acc:HGNC:24637]
79. VDAC3 ENSGALG00000041463 21595 0.824 - - - - - - 0.824 - - - voltage dependent anion channel 3, transcript variant X9
80. SAV1 ENSGALG00000012341 3313 0.824 - - - - - - 0.824 - - - salvador family WW domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:17795]
81. RPUSD4 ENSGALG00000024326 3788 0.824 - - - - - - 0.824 - - - RNA pseudouridylate synthase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25898]
82. STAG2 ENSGALG00000008482 13629 0.822 - - - - - - 0.822 - - - stromal antigen 2 [Source:HGNC Symbol;Acc:HGNC:11355]
83. LYVE1 ENSGALG00000005643 1230 0.821 - - - - - - 0.821 - - - lymphatic vessel endothelial hyaluronan receptor 1 [Source:NCBI gene;Acc:423038]
84. LUZP2 ENSGALG00000030151 585 0.821 - - - - - - 0.821 - - - leucine zipper protein 2 [Source:NCBI gene;Acc:423001]
85. CSDE1 ENSGALG00000002139 1683 0.821 - - - - - - 0.821 - - - cold shock domain containing E1 [Source:NCBI gene;Acc:419886]
86. LOC407092 ENSGALG00000013809 10706 0.82 - - - - - - 0.820 - - - AD012Z, transcript variant X5
87. MAPT ENSGALG00000000625 659 0.82 - - - - - - 0.820 - - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
88. TRIB2 ENSGALG00000016457 17641 0.819 - - - - - - 0.819 - - - tribbles pseudokinase 2 [Source:NCBI gene;Acc:378919]
89. LHFPL2 ENSGALG00000004437 500 0.819 - - - - - - 0.819 - - - LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]
90. CHPKCI CHPKCI 36217 0.806 - - - - - - 0.806 - - -
91. SNX17 ENSGALG00000032468 13519 0.806 - - - - - - 0.806 - - - sorting nexin 17 [Source:HGNC Symbol;Acc:HGNC:14979]
92. RPL7A ENSGALG00000003197 353903 0.8 - - - - - 0.800 - - - - ribosomal protein L7a [Source:NCBI gene;Acc:417158]
93. RPL29 ENSGALG00000026978 271790 0.8 - - - - - - 0.800 - - - ribosomal protein L29 [Source:NCBI gene;Acc:770249]
94. RPS7 ENSGALG00000016392 283283 0.799 - - - - - - - - 0.799 - ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]
95. TAF12 ENSGALG00000000991 8709 0.798 - - - - - - 0.798 - - - TATA-box binding protein associated factor 12 [Source:NCBI gene;Acc:419585]
96. MED1 ENSGALG00000001708 9556 0.789 - - - - - - 0.789 - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
97. RPS3 ENSGALG00000017330 212566 0.788 - - - - - 0.788 - - - - ribosomal protein S3 [Source:NCBI gene;Acc:419069]
98. RPS14 ENSGALG00000004588 268250 0.787 - - - - - 0.787 - - - - ribosomal protein S14 [Source:NCBI gene;Acc:416275]
99. EIF2S3 ENSGALG00000016340 48073 0.787 - - - - - 0.787 - - - - eukaryotic translation initiation factor 2 subunit gamma [Source:NCBI gene;Acc:418597]
100. HSPE1 ENSGALG00000009070 87567 0.78 - - - - 0.780 - - - - - heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]

There are 29 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA