Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RPS23

Gene Name Gene ID Reads Annotation
RPS23 ENSGALG00000015617 430299 ribosomal protein S23











Genes with expression patterns similar to RPS23

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RPS23 ENSGALG00000015617 430299 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein S23
2. COX7C ENSGALG00000027963 84312 2.209 0.708 0.730 - - - 0.771 - - - - cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
3. RPS24 ENSGALG00000004871 173117 1.716 0.896 0.820 - - - - - - - - ribosomal protein S24 [Source:NCBI gene;Acc:423726]
4. RPL36AL ENSGALG00000004952 205590 1.682 0.863 0.819 - - - - - - - - ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
5. RPL36 ENSGALG00000000474 237707 1.676 0.898 0.778 - - - - - - - - ribosomal protein L36 [Source:NCBI gene;Acc:373936]
6. RPS15A ENSGALG00000006771 287037 1.669 0.818 0.851 - - - - - - - - ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
7. RPL14 ENSGALG00000043379 239812 1.65 0.832 0.818 - - - - - - - - ribosomal protein L14
8. PRDX1 ENSGALG00000010243 151918 1.639 0.831 0.808 - - - - - - - - peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
9. RPL23 ENSGALG00000001634 246592 1.638 0.850 0.788 - - - - - - - - Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
10. EIF1 ENSGALG00000028517 124882 1.483 0.781 - - - - - - 0.702 - - eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
11. RPL7 ENSGALG00000035252 247865 1.455 0.735 - - - - 0.720 - - - - ribosomal protein L7 [Source:NCBI gene;Acc:420182]
12. RPL30 ENSGALG00000029897 58241 1.449 0.706 - - - - 0.743 - - - - ribosomal protein L30 [Source:NCBI gene;Acc:425416]
13. RPL35 ENSGALG00000035677 252113 1.424 - - 0.714 - 0.710 - - - - - ribosomal protein L35 [Source:NCBI gene;Acc:374133]
14. RPL31 ENSGALG00000016775 188657 0.879 0.879 - - - - - - - - - ribosomal protein L31 [Source:NCBI gene;Acc:418710]
15. RPL27 ENSGALG00000002837 302752 0.873 0.873 - - - - - - - - - ribosomal protein L27 [Source:NCBI gene;Acc:396280]
16. RPS21 ENSGALG00000005338 293390 0.87 0.870 - - - - - - - - - ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
17. CHPKCI CHPKCI 36217 0.861 0.861 - - - - - - - - -
18. RPL29 ENSGALG00000026978 271790 0.852 0.852 - - - - - - - - - ribosomal protein L29 [Source:NCBI gene;Acc:770249]
19. SRP14 ENSGALG00000009592 17828 0.837 0.837 - - - - - - - - - signal recognition particle 14 [Source:NCBI gene;Acc:423284]
20. UQCRH ENSGALG00000017380 55734 0.83 0.830 - - - - - - - - - ubiquinol-cytochrome c reductase hinge protein [Source:NCBI gene;Acc:771939]
21. TXN ENSGALG00000015704 170016 0.83 0.830 - - - - - - - - - thioredoxin [Source:NCBI gene;Acc:396437]
22. TCEB3 ENSGALG00000034625 184577 0.829 0.829 - - - - - - - - - transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
23. RBF RBF 49711 0.828 0.828 - - - - - - - - -
24. CLNS1A ENSGALG00000008574 25675 0.813 0.813 - - - - - - - - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
25. MYCBP ENSGALG00000024295 13273 0.811 0.811 - - - - - - - - - MYC binding protein
26. HSPE1 ENSGALG00000009070 87567 0.803 0.803 - - - - - - - - - heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
27. ATP5G3 168626 0.785 0.785 - - - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
28. KPNA2 ENSGALG00000003584 76058 0.781 0.781 - - - - - - - - - karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
29. UQCRC1 ENSGALG00000005789 23201 0.78 - - - - - - - 0.780 - - ubiquinol-cytochrome c reductase core protein 1 [Source:HGNC Symbol;Acc:HGNC:12585]
30. MRPS31 ENSGALG00000017033 9287 0.777 0.777 - - - - - - - - - mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:HGNC:16632]
31. SEC61B ENSGALG00000013569 48883 0.777 0.777 - - - - - - - - - Sec61 translocon beta subunit [Source:NCBI gene;Acc:420997]
32. THOC7 ENSGALG00000007299 38227 0.772 0.772 - - - - - - - - - THO complex 7 [Source:NCBI gene;Acc:416077]
33. COX7B ENSGALG00000007863 59194 0.77 - 0.770 - - - - - - - - cytochrome c oxidase subunit 7B [Source:NCBI gene;Acc:771947]
34. SALL4 ENSGALG00000041365 6760 0.769 0.769 - - - - - - - - - spalt like transcription factor 4 [Source:NCBI gene;Acc:769286]
35. TMEM199 ENSGALG00000023757 10781 0.767 - - - - - - - 0.767 - - transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
36. HNRNPR ENSGALG00000000814 32290 0.766 - - - - - - - 0.766 - - heterogeneous nuclear ribonucleoprotein R [Source:NCBI gene;Acc:419570]
37. TPT1 ENSGALG00000028872 116322 0.765 0.765 - - - - - - - - - tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
38. RPL26 RPL26 343071 0.765 - - - - - 0.765 - - - -
39. LDHB ENSGALG00000035836 169726 0.764 0.764 - - - - - - - - - lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
40. RPL23A ENSGALG00000003966 369097 0.764 0.764 - - - - - - - - - ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
41. EMP2 ENSGALG00000027058 3925 0.76 - - - - - 0.760 - - - - epithelial membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:3334]
42. HNRNPA2B1 ENSGALG00000011036 53662 0.759 0.759 - - - - - - - - - heterogeneous nuclear ribonucleoprotein A2/B1 [Source:NCBI gene;Acc:420627]
43. SDC1 ENSGALG00000016480 13737 0.759 0.759 - - - - - - - - - syndecan 1 [Source:HGNC Symbol;Acc:HGNC:10658]
44. C19H17ORF85 C19H17ORF85 2538 0.751 - - - - - 0.751 - - - -
45. PSMA2 ENSGALG00000039387 23620 0.749 0.749 - - - - - - - - - proteasome subunit alpha 2 [Source:NCBI gene;Acc:420772]
46. ASCC3 ENSGALG00000015465 259 0.748 - - - - - 0.748 - - - - activating signal cointegrator 1 complex subunit 3 [Source:NCBI gene;Acc:421790]
47. PNPLA4 ENSGALG00000016618 142 0.747 - - - - - 0.747 - - - - patatin like phospholipase domain containing 4 [Source:NCBI gene;Acc:418653]
48. SDR16C5 ENSGALG00000015416, ENSGALG00000022827 1038 0.747 - - - - - 0.747 - - - - short chain dehydrogenase/reductase family 16C member 5 [Source:HGNC Symbol;Acc:HGNC:30311]
49. SERPINF2 ENSGALG00000002987 236 0.745 - - - - - 0.745 - - - - serpin family F member 2 [Source:HGNC Symbol;Acc:HGNC:9075]
50. HJURP ENSGALG00000015363 54 0.742 - - - - - 0.742 - - - - Holliday junction recognition protein [Source:NCBI gene;Acc:418413]
51. FGD4 ENSGALG00000012932 50 0.736 - - - - - 0.736 - - - - FYVE, RhoGEF and PH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19125]
52. RPL18A 278781 0.734 0.734 - - - - - - - - - ribosomal protein L18a
53. FAM177A1 ENSGALG00000010046 4318 0.732 - - - - - 0.732 - - - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
54. H3-IX H3-IX 155627 0.732 0.732 - - - - - - - - -
55. RPL8 ENSGALG00000016232 356637 0.73 - - - - - 0.730 - - - - ribosomal protein L8 [Source:NCBI gene;Acc:418568]
56. ODC1 ENSGALG00000016444 20119 0.73 0.730 - - - - - - - - - ornithine decarboxylase 1 [Source:NCBI gene;Acc:421937]
57. SLC16A1 ENSGALG00000001717 18566 0.729 0.729 - - - - - - - - - solute carrier family 16 member 1 [Source:NCBI gene;Acc:419875]
58. NIPAL4 ENSGALG00000039687 29 0.727 - - - - - 0.727 - - - - NIPA like domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28018]
59. GPD1L2 ENSGALG00000012061 31 0.726 - - - - - 0.726 - - - - glycerol-3-phosphate dehydrogenase 1-like 2
60. TERF1 ENSGALG00000037453 4497 0.726 - - - - - 0.726 - - - - telomeric repeat binding factor 1 [Source:NCBI gene;Acc:378896]
61. LOC419851 ENSGALG00000023953 80 0.726 - - - - - 0.726 - - - - complement component 4 binding protein, alpha chain
62. PRKCI ENSGALG00000009364 11574 0.725 - 0.725 - - - - - - - - protein kinase C iota [Source:NCBI gene;Acc:424991]
63. MT-ND4L MT-ND4L 12537 0.724 - - - - - 0.724 - - - -
64. OLFML1 ENSGALG00000027184 19 0.724 - - - - - 0.724 - - - - olfactomedin like 1 [Source:HGNC Symbol;Acc:HGNC:24473]
65. ATP5C1 53961 0.724 0.724 - - - - - - - - - ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant X1
66. C1orf168 C1orf168 98 0.723 - - - - - 0.723 - - - -
67. ELMSAN1 ENSGALG00000009282 79 0.723 - - - - - 0.723 - - - - ELM2 and Myb/SANT domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19853]
68. MCC ENSGALG00000000208 61 0.723 - - - - - 0.723 - - - - MCC, WNT signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:6935]
69. ENSGALG00000021397 ENSGALG00000021397 51155 0.722 0.722 - - - - - - - - -
70. RPS15 ENSGALG00000015195 387213 0.722 - - - - - 0.722 - - - - ribosomal protein S15 [Source:NCBI gene;Acc:396448]
71. KIF7 ENSGALG00000006611 33 0.721 - - - - - 0.721 - - - - kinesin family member 7 [Source:HGNC Symbol;Acc:HGNC:30497]
72. DSEL ENSGALG00000042505 92 0.72 - - - - - 0.720 - - - - dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
73. EIF2AK4 ENSGALG00000009611 2164 0.718 - - - - - 0.718 - - - - eukaryotic translation initiation factor 2 alpha kinase 4 [Source:HGNC Symbol;Acc:HGNC:19687]
74. SH2D1B ENSGALG00000028448 17 0.718 - - - - - 0.718 - - - - SH2 domain containing 1B [Source:NCBI gene;Acc:418411]
75. C9orf96 C9orf96 43 0.717 - - - - - 0.717 - - - -
76. KLHL40 ENSGALG00000005292 61 0.717 - - - - - 0.717 - - - - kelch like family member 40 [Source:HGNC Symbol;Acc:HGNC:30372]
77. MINOS1 ENSGALG00000004039 37740 0.715 0.715 - - - - - - - - - mitochondrial inner membrane organizing system 1 [Source:NCBI gene;Acc:419474]
78. MXRA5 ENSGALG00000016635 352 0.714 - - - - - 0.714 - - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
79. SERPINB1 ENSGALG00000019555 29 0.713 - - - - - 0.713 - - - - serpin family B member 1 [Source:HGNC Symbol;Acc:HGNC:3311]
80. CLASP1 ENSGALG00000011645 1378 0.713 - - - - - 0.713 - - - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
81. DRD4 ENSGALG00000040761 79 0.712 - - - - - 0.712 - - - - dopamine receptor D4 [Source:NCBI gene;Acc:423016]
82. EFCAB10 ENSGALG00000045949 514 0.711 - - - - - 0.711 - - - - EF-hand calcium binding domain 10 [Source:HGNC Symbol;Acc:HGNC:34531]
83. AQP1 ENSGALG00000005209 111 0.711 - - - - - 0.711 - - - - aquaporin 1 [Source:NCBI gene;Acc:420384]
84. RPS10 ENSGALG00000002813 541909 0.711 - - - - - 0.711 - - - - ribosomal protein S10 [Source:NCBI gene;Acc:419904]
85. GTF3C4 ENSGALG00000031016 1221 0.709 - - - - - 0.709 - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
86. LTC4SL ENSGALG00000011450 645 0.709 - - - - - 0.709 - - - - leukotriene C4 synthase-like, transcript variant X3
87. PPP2R2A ENSGALG00000000235 4263 0.708 0.708 - - - - - - - - - protein phosphatase 2 regulatory subunit Balpha [Source:NCBI gene;Acc:419523]
88. DJ-1 DJ-1 13462 0.708 0.708 - - - - - - - - -
89. PACSIN2 ENSGALG00000014159 601 0.707 - - - - - 0.707 - - - - protein kinase C and casein kinase substrate in neurons 2 [Source:NCBI gene;Acc:395975]
90. FIGNL1 ENSGALG00000026363 2194 0.707 - - - - - 0.707 - - - - fidgetin like 1, transcript variant X2
91. MLF1 ENSGALG00000009654 619 0.707 - - - - - 0.707 - - - - myeloid leukemia factor 1, transcript variant X3
92. ENSGALG00000002903 ENSGALG00000002903 18304 0.707 0.707 - - - - - - - - -
93. SMOC2 ENSGALG00000011205 340 0.706 - - - - - 0.706 - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
94. ZNF236 ENSGALG00000013657 154 0.706 - - - - - 0.706 - - - - zinc finger protein 236 [Source:HGNC Symbol;Acc:HGNC:13028]
95. CADPS2 ENSGALG00000008926 398 0.706 - - - - - 0.706 - - - - calcium dependent secretion activator 2 [Source:HGNC Symbol;Acc:HGNC:16018]
96. ADNP2 ENSGALG00000035669 318 0.706 - - - - - 0.706 - - - - ADNP homeobox 2 [Source:HGNC Symbol;Acc:HGNC:23803]
97. BLVRA ENSGALG00000031786 23 0.705 - - - - - 0.705 - - - - biliverdin reductase A [Source:HGNC Symbol;Acc:HGNC:1062]
98. DBT ENSGALG00000005280 2893 0.705 - - - - - 0.705 - - - - dihydrolipoamide branched chain transacylase E2 [Source:NCBI gene;Acc:395374]
99. TMPO ENSGALG00000011504 14454 0.704 0.704 - - - - - - - - - thymopoietin [Source:NCBI gene;Acc:417923]
100. GLYR1 ENSGALG00000038338 569 0.703 - - - - - 0.703 - - - - glyoxylate reductase 1 homolog [Source:NCBI gene;Acc:426988]

There are 5 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA