Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RPS20

Gene Name Gene ID Reads Annotation
RPS20 ENSGALG00000014432 209638 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]











Genes with expression patterns similar to RPS20

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RPS20 ENSGALG00000014432 209638 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
2. MMP2 ENSGALG00000003580 13120 1.657 - - - - - 0.737 0.920 - - - matrix metallopeptidase 2 [Source:NCBI gene;Acc:386583]
3. SNRPD1 ENSGALG00000041334 219195 0.939 - - - - - - 0.939 - - - small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
4. MYL12A ENSGALG00000014854 63033 0.934 - - - - - - 0.934 - - - myosin, light chain 12A, regulatory, non-sarcomeric [Source:NCBI gene;Acc:396284]
5. ENSGALG00000022570 ENSGALG00000022570 90374 0.933 - - - - - - 0.933 - - -
6. Sep-02_1 Sep-02_1 19203 0.927 - - - - - - 0.927 - - -
7. NT5DC2 ENSGALG00000035596 27633 0.926 - - - - - - 0.926 - - - 5'-nucleotidase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25717]
8. PRKACB ENSGALG00000028530 12506 0.926 - - - - - - 0.926 - - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
9. PRRC1 ENSGALG00000014703 9962 0.926 - - - - - - 0.926 - - - proline rich coiled-coil 1 [Source:NCBI gene;Acc:427127]
10. KIF4A ENSGALG00000004195 25487 0.926 - - - - - - 0.926 - - - kinesin family member 4A [Source:NCBI gene;Acc:395823]
11. WDFY3 10775 0.924 - - - - - - 0.924 - - - WD repeat and FYVE domain containing 3, transcript variant X7
12. ERP29 ENSGALG00000023510 47100 0.923 - - - - - - 0.923 - - - endoplasmic reticulum protein 29 [Source:NCBI gene;Acc:416882]
13. GNA13 ENSGALG00000036028 9791 0.922 - - - - - - 0.922 - - - G protein subunit alpha 13 [Source:HGNC Symbol;Acc:HGNC:4381]
14. ISCA1 ENSGALG00000012606 10342 0.921 - - - - - - 0.921 - - - iron-sulfur cluster assembly 1 [Source:NCBI gene;Acc:427463]
15. NUP93 ENSGALG00000003010 16504 0.919 - - - - - - 0.919 - - - nucleoporin 93 [Source:NCBI gene;Acc:415693]
16. RAB14 ENSGALG00000001474 12617 0.919 - - - - - - 0.919 - - - RAB14, member RAS oncogene family [Source:NCBI gene;Acc:417119]
17. NEDD4L ENSGALG00000034584 5881 0.918 - - - - - - 0.918 - - - neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, transcript variant X6
18. IL17RD ENSGALG00000005499 5844 0.918 - - - - - - 0.918 - - - interleukin 17 receptor D [Source:NCBI gene;Acc:395186]
19. SNX24 ENSGALG00000018874 4482 0.918 - - - - - - 0.918 - - - sorting nexin 24 [Source:NCBI gene;Acc:426798]
20. ENSGALG00000003150 ENSGALG00000003150 10001 0.917 - - - - - - 0.917 - - -
21. PTGR2 ENSGALG00000009269 4991 0.917 - - - - - - 0.917 - - - prostaglandin reductase 2 [Source:NCBI gene;Acc:423244]
22. TTLL5 ENSGALG00000010340 4875 0.917 - - - - - - 0.917 - - - tubulin tyrosine ligase like 5 [Source:NCBI gene;Acc:423367]
23. SULF1 ENSGALG00000039553 5115 0.917 - - - - - - 0.917 - - - sulfatase 1 [Source:HGNC Symbol;Acc:HGNC:20391]
24. RNF114 ENSGALG00000008021 6078 0.917 - - - - - - 0.917 - - - ring finger protein 114 [Source:NCBI gene;Acc:414881]
25. PSMD9 ENSGALG00000004352 7284 0.916 - - - - - - 0.916 - - - proteasome 26S subunit, non-ATPase 9 [Source:NCBI gene;Acc:416853]
26. ING3 ENSGALG00000009023 4961 0.916 - - - - - - 0.916 - - - inhibitor of growth family member 3 [Source:NCBI gene;Acc:417762]
27. DGKD ENSGALG00000001730 4456 0.916 - - - - - - 0.916 - - - diacylglycerol kinase delta [Source:HGNC Symbol;Acc:HGNC:2851]
28. CCNY ENSGALG00000007076 3921 0.916 - - - - - - 0.916 - - - cyclin Y [Source:HGNC Symbol;Acc:HGNC:23354]
29. VPS39 ENSGALG00000008991 4018 0.916 - - - - - - 0.916 - - - VPS39, HOPS complex subunit [Source:NCBI gene;Acc:423230]
30. PASK ENSGALG00000006016 3096 0.915 - - - - - - 0.915 - - - PAS domain containing serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:17270]
31. POLDIP3 ENSGALG00000011863 6424 0.915 - - - - - - 0.915 - - - DNA polymerase delta interacting protein 3 [Source:NCBI gene;Acc:417974]
32. WNT7B ENSGALG00000036255 3343 0.914 - - - - - - 0.914 - - - Wnt family member 7B [Source:NCBI gene;Acc:427937]
33. ARHGEF28 ENSGALG00000014923 2523 0.913 - - - - - - 0.913 - - - Rho guanine nucleotide exchange factor 28 [Source:HGNC Symbol;Acc:HGNC:30322]
34. MARCKSL1 ENSGALG00000032335 88728 0.887 - - - - - - 0.887 - - - MARCKS like 1 [Source:NCBI gene;Acc:770764]
35. SMNDC1 ENSGALG00000008561 14415 0.868 - - - - - - 0.868 - - - survival motor neuron domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16900]
36. MSX2 ENSGALG00000038848 6950 0.857 - - - - - - 0.857 - - - msh homeobox 2 [Source:NCBI gene;Acc:395245]
37. GPR20 ENSGALG00000041730 1926 0.833 - - - - - 0.833 - - - - G protein-coupled receptor 20 [Source:HGNC Symbol;Acc:HGNC:4475]
38. ANXA1 ENSGALG00000015148 13804 0.823 - - - - - 0.823 - - - - annexin A1 [Source:NCBI gene;Acc:404271]
39. ACTG1_1 ENSGALG00000001381 64662 0.778 - - - - - - 0.778 - - - Actin, gamma 1 [Source:NCBI gene;Acc:415296]
40. RPSA 325288 0.774 - - - - - 0.774 - - - - ribosomal protein SA
41. UCHL5 ENSGALG00000002524 28460 0.772 - - - - - - 0.772 - - - ubiquitin C-terminal hydrolase L5 [Source:NCBI gene;Acc:424359]
42. RPS27A ENSGALG00000036790 249359 0.763 - - - - - - 0.763 - - - ribosomal protein S27a [Source:NCBI gene;Acc:395796]
43. PUS1 ENSGALG00000002354 10153 0.76 - - - - - - 0.760 - - - pseudouridylate synthase 1 [Source:HGNC Symbol;Acc:HGNC:15508]
44. DDRGK1 ENSGALG00000016003 9098 0.759 - - - - - - 0.759 - - - DDRGK domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16110]
45. EEF1B2 ENSGALG00000008590 144025 0.758 - - - - - 0.758 - - - - Gallus gallus eukaryotic translation elongation factor 1 beta 2 (EEF1B2), mRNA. [Source:RefSeq mRNA;Acc:NM_204901]
46. EEF1D 153795 0.743 - - - - - 0.743 - - - - eukaryotic translation elongation factor 1 delta, transcript variant X13
47. STMN1 ENSGALG00000001475 225354 0.739 - - - - - 0.739 - - - - stathmin 1 [Source:NCBI gene;Acc:396057]
48. MAB21L2 4841 0.738 - - - - - 0.738 - - - - mab-21-like 2 (C. elegans)
49. SSFA2 2288 0.732 - - - - - 0.732 - - - - sperm specific antigen 2, transcript variant X2
50. TAPA1 TAPA1 8669 0.728 - - - - - 0.728 - - - -
51. ANO1 ENSGALG00000041808 5149 0.719 - - - - - 0.719 - - - - anoctamin 1 [Source:HGNC Symbol;Acc:HGNC:21625]
52. RPS11 ENSGALG00000017299 265862 0.713 - - 0.713 - - - - - - - ribosomal protein S11 [Source:NCBI gene;Acc:419049]
53. COLEC10 ENSGALG00000033144 3436 0.712 - - - - - 0.712 - - - - collectin subfamily member 10 [Source:NCBI gene;Acc:420281]
54. EEF1A EEF1A 1025209 0.711 - - - - - 0.711 - - - -
55. RPL3 ENSGALG00000012172 118287 0.71 - 0.710 - - - - - - - - ribosomal protein L3 [Source:NCBI gene;Acc:418016]
56. AKR1D1 ENSGALG00000012834 15183 0.71 - - - - - 0.710 - - - - aldo-keto reductase family 1 member D1 [Source:NCBI gene;Acc:418107]
57. PRRG1 ENSGALG00000016266 3473 0.709 - - - - - 0.709 - - - - proline rich and Gla domain 1 [Source:NCBI gene;Acc:418582]
58. ZNF593 ENSGALG00000000542 79105 0.707 - - - - - 0.707 - - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
59. NET1 ENSGALG00000008437 9850 0.707 - - - - - 0.707 - - - - neuroepithelial cell transforming 1 [Source:NCBI gene;Acc:416693]
60. BAMBI ENSGALG00000040993 7562 0.706 - - - - - 0.706 - - - - BMP and activin membrane bound inhibitor [Source:NCBI gene;Acc:428413]
61. FAM53A ENSGALG00000015713 3795 0.706 - - - - 0.706 - - - - - family with sequence similarity 53 member A [Source:NCBI gene;Acc:378905]
62. ARID4B ENSGALG00000034003 5364 0.705 - - - - 0.705 - - - - - AT-rich interaction domain 4B [Source:HGNC Symbol;Acc:HGNC:15550]
63. NUDC ENSGALG00000000895 17844 0.703 - - - - 0.703 - - - - - nuclear distribution C, dynein complex regulator [Source:NCBI gene;Acc:419578]
64. SOD1 ENSGALG00000015844 35836 0.702 - - - - - 0.702 - - - - superoxide dismutase 1, soluble [Source:NCBI gene;Acc:395938]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA