Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RPS15A

Gene Name Gene ID Reads Annotation
RPS15A ENSGALG00000006771 287037 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]











Genes with expression patterns similar to RPS15A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RPS15A ENSGALG00000006771 287037 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
2. RPL36AL ENSGALG00000004952 205590 2.466 0.799 0.886 - - - 0.781 - - - - ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
3. RPL23 ENSGALG00000001634 246592 2.418 0.839 0.846 - - - - 0.733 - - - Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
4. RPL29 ENSGALG00000026978 271790 2.183 0.721 0.754 - - - - - - - 0.708 ribosomal protein L29 [Source:NCBI gene;Acc:770249]
5. RPS23 ENSGALG00000015617 430299 1.669 0.818 0.851 - - - - - - - - ribosomal protein S23
6. RPL31 ENSGALG00000016775 188657 1.652 0.888 0.764 - - - - - - - - ribosomal protein L31 [Source:NCBI gene;Acc:418710]
7. RPS21 ENSGALG00000005338 293390 1.612 0.836 - - - 0.776 - - - - - ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
8. RPL36 ENSGALG00000000474 237707 1.612 0.815 0.797 - - - - - - - - ribosomal protein L36 [Source:NCBI gene;Acc:373936]
9. RPS24 ENSGALG00000004871 173117 1.607 0.767 0.840 - - - - - - - - ribosomal protein S24 [Source:NCBI gene;Acc:423726]
10. RPL14 ENSGALG00000043379 239812 1.588 0.755 0.833 - - - - - - - - ribosomal protein L14
11. MRPS27 ENSGALG00000015002 6541 1.581 - - - - 0.846 - 0.735 - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
12. RPL39 ENSGALG00000008620 63315 1.563 - - - - - 0.791 0.772 - - - ribosomal protein L39 [Source:NCBI gene;Acc:374132]
13. RPL7 ENSGALG00000035252 247865 1.552 0.727 - - - - 0.825 - - - - ribosomal protein L7 [Source:NCBI gene;Acc:420182]
14. RPL30 ENSGALG00000029897 58241 1.545 - 0.798 - - - 0.747 - - - - ribosomal protein L30 [Source:NCBI gene;Acc:425416]
15. ENSGALG00000002696 ENSGALG00000002696 191985 1.523 - - - - 0.741 0.782 - - - -
16. DYNLRB1 ENSGALG00000034509 28361 1.508 - - - - 0.752 - 0.756 - - - dynein light chain roadblock-type 1
17. HSPE1 ENSGALG00000009070 87567 1.464 0.729 0.735 - - - - - - - - heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
18. RPL23A ENSGALG00000003966 369097 1.453 0.709 0.744 - - - - - - - - ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
19. RPL7A ENSGALG00000003197 353903 0.887 - - - - - 0.887 - - - - ribosomal protein L7a [Source:NCBI gene;Acc:417158]
20. YTHDF2 ENSGALG00000034831 15118 0.883 - - - - - - 0.883 - - - YTH N6-methyladenosine RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:31675]
21. SIAH1 ENSGALG00000003916 6682 0.874 - - - - - - 0.874 - - - siah E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:10857]
22. RPS10 ENSGALG00000002813 541909 0.869 - - - - - 0.869 - - - - ribosomal protein S10 [Source:NCBI gene;Acc:419904]
23. STRAP ENSGALG00000013092 13100 0.859 - - - - 0.859 - - - - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
24. SSR2 ENSGALG00000000764 32190 0.858 - - - - 0.858 - - - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
25. CSNK1G1 ENSGALG00000030812 31618 0.858 - - - - 0.858 - - - - - casein kinase 1 gamma 1 [Source:NCBI gene;Acc:415328]
26. KNOP1 ENSGALG00000002042 6251 0.857 - - - - 0.857 - - - - - lysine-rich nucleolar protein 1, transcript variant X1
27. BAG4 ENSGALG00000003254 5751 0.857 - - - - 0.857 - - - - - BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
28. CTSZ ENSGALG00000007462 630 0.857 - - - - 0.857 - - - - - cathepsin Z [Source:HGNC Symbol;Acc:HGNC:2547]
29. EAPP ENSGALG00000010007 5080 0.857 - - - - 0.857 - - - - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
30. TLCD1 ENSGALG00000003973 17569 0.857 - - - - 0.857 - - - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
31. SSPN ENSGALG00000014042 638 0.857 - - - - 0.857 - - - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
32. FH ENSGALG00000013165 13669 0.857 - - - - 0.857 - - - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
33. ENSGALG00000011687 ENSGALG00000011687 4553 0.856 - - - - 0.856 - - - - -
34. RPS3 ENSGALG00000017330 212566 0.856 - - - - - 0.856 - - - - ribosomal protein S3 [Source:NCBI gene;Acc:419069]
35. ZBTB10 ENSGALG00000034376 3271 0.856 - - - - 0.856 - - - - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
36. ELL2 ENSGALG00000014678 1111 0.856 - - - - 0.856 - - - - - elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
37. DDX55 ENSGALG00000003298 2315 0.856 - - - - 0.856 - - - - - DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
38. IGF1R ENSGALG00000040651 772 0.856 - - - - 0.856 - - - - - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
39. IGBP1 ENSGALG00000044628 9200 0.855 - - - - 0.855 - - - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
40. DNAJC12 ENSGALG00000002769 1418 0.854 - - - - 0.854 - - - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
41. TK2 ENSGALG00000034216 5394 0.854 - - - - 0.854 - - - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
42. REEP5 ENSGALG00000023157 6282 0.854 - - - - 0.854 - - - - - receptor accessory protein 5 [Source:NCBI gene;Acc:770021]
43. REST 2394 0.854 - - - - 0.854 - - - - - RE1 silencing transcription factor
44. NAP1L1 ENSGALG00000010238 14506 0.854 - - - - 0.854 - - - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
45. XPO7 ENSGALG00000001838 1875 0.853 - - - - 0.853 - - - - - exportin 7 [Source:NCBI gene;Acc:426925]
46. COIL ENSGALG00000003158 7806 0.853 - - - - 0.853 - - - - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
47. CBWD1 ENSGALG00000010147 2765 0.851 - - - - 0.851 - - - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
48. FERMT2 ENSGALG00000012425 5480 0.851 - - - - 0.851 - - - - - fermitin family member 2 [Source:HGNC Symbol;Acc:HGNC:15767]
49. TRAPPC12 ENSGALG00000016387 2593 0.851 - - - - 0.851 - - - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
50. NDUFB9 ENSGALG00000042242 115459 0.851 - - - - 0.851 - - - - - NADH:ubiquinone oxidoreductase subunit B9 [Source:HGNC Symbol;Acc:HGNC:7704]
51. SH2D3C ENSGALG00000005036 5101 0.851 - - - - 0.851 - - - - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
52. ATG5 ENSGALG00000015387 7752 0.85 - - - - 0.850 - - - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
53. COMMD8 ENSGALG00000026279 13509 0.85 - - - - 0.850 - - - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
54. ENSGALG00000014852 ENSGALG00000014852 15288 0.85 - - - - 0.850 - - - - -
55. WDR82 ENSGALG00000025904 4783 0.85 - - - - 0.850 - - - - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
56. TMEM165 ENSGALG00000027886 5468 0.85 - - - - 0.850 - - - - - transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
57. SIRT1 ENSGALG00000002761 9028 0.849 - - - - 0.849 - - - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
58. MKI67 ENSGALG00000025996 28136 0.849 - - - - 0.849 - - - - - marker of proliferation Ki-67, transcript variant X3
59. MRPS25 ENSGALG00000008506 12131 0.848 - - - - 0.848 - - - - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]
60. TCP11L1 ENSGALG00000011688 2427 0.848 - - - - 0.848 - - - - - t-complex 11 like 1 [Source:NCBI gene;Acc:421594]
61. CZH9ORF41 CZH9ORF41 3492 0.847 - - - - 0.847 - - - - -
62. PSPC1 ENSGALG00000017142 13036 0.846 - - - - 0.846 - - - - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
63. SHROOM2 ENSGALG00000030802 4517 0.846 - - - - 0.846 - - - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
64. FBXO9 ENSGALG00000016320 9600 0.846 - - - - 0.846 - - - - - F-box protein 9 [Source:NCBI gene;Acc:421895]
65. POLR2B ENSGALG00000011387 4864 0.845 - - - - 0.845 - - - - - RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
66. SAR1B ENSGALG00000038753 6493 0.845 - - - - 0.845 - - - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
67. POLR3F ENSGALG00000008749 5645 0.843 - - - - 0.843 - - - - - RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]
68. YY1 ENSGALG00000017388 1933 0.843 - - - - 0.843 - - - - - YY1 transcription factor [Source:NCBI gene;Acc:423455]
69. NFASC ENSGALG00000031776 4264 0.843 - - - - 0.843 - - - - - neurofascin [Source:NCBI gene;Acc:419824]
70. KERA ENSGALG00000011270 4204 0.842 - - - - 0.842 - - - - - keratocan [Source:NCBI gene;Acc:373995]
71. PUM2 ENSGALG00000016481 23625 0.841 - - - - - - 0.841 - - - pumilio RNA binding family member 2 [Source:NCBI gene;Acc:421961]
72. TLK2 ENSGALG00000000410 4690 0.84 - - - - 0.840 - - - - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
73. MRPL23 ENSGALG00000006561 13737 0.839 - - - - 0.839 - - - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
74. LATS2 4776 0.839 - - - - 0.839 - - - - - large tumor suppressor kinase 2
75. PUM1 ENSGALG00000042598 9392 0.839 - - - - 0.839 - - - - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
76. LY6E ENSGALG00000041621 16227 0.838 - - - - 0.838 - - - - - lymphocyte antigen 6 family member E [Source:NCBI gene;Acc:395550]
77. RABEP1 ENSGALG00000001737 2650 0.838 - - - - 0.838 - - - - - rabaptin, RAB GTPase binding effector protein 1 [Source:NCBI gene;Acc:395930]
78. GPN3 ENSGALG00000003807 6320 0.838 - - - - 0.838 - - - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
79. PLAA ENSGALG00000001782 5459 0.838 - - - - 0.838 - - - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
80. IGDCC4 ENSGALG00000007410 5457 0.837 - - - - 0.837 - - - - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
81. NOP58 ENSGALG00000008454 34630 0.837 - - - - 0.837 - - - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
82. STK3 ENSGALG00000032850 6339 0.836 - - - - 0.836 - - - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
83. EIF3E ENSGALG00000037067 36561 0.836 - - - - 0.836 - - - - - eukaryotic translation initiation factor 3 subunit E [Source:NCBI gene;Acc:420272]
84. JSC JSC 7982 0.834 - - - - 0.834 - - - - -
85. RPL8 ENSGALG00000016232 356637 0.833 - - - - - 0.833 - - - - ribosomal protein L8 [Source:NCBI gene;Acc:418568]
86. SFSWAP ENSGALG00000002487 9977 0.832 - - - - 0.832 - - - - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
87. RCAN3 ENSGALG00000004282 7778 0.83 - - - - 0.830 - - - - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
88. KPNA3 ENSGALG00000017009 17330 0.829 - - - - 0.829 - - - - - karyopherin subunit alpha 3 [Source:NCBI gene;Acc:418870]
89. DDX21 ENSGALG00000004144 13105 0.829 - - - - 0.829 - - - - - DExD-box helicase 21 [Source:HGNC Symbol;Acc:HGNC:2744]
90. DRAXIN ENSGALG00000004631 3122 0.827 - - - - 0.827 - - - - - dorsal inhibitory axon guidance protein [Source:NCBI gene;Acc:419492]
91. CDC42SE2 ENSGALG00000027258 4725 0.826 - - - - 0.826 - - - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
92. RPL10A ENSGALG00000002644 166422 0.826 - - - - - 0.826 - - - - ribosomal protein L10a [Source:HGNC Symbol;Acc:HGNC:10299]
93. OGT ENSGALG00000005425 31074 0.826 - - - - 0.826 - - - - - O-linked N-acetylglucosamine (GlcNAc) transferase [Source:HGNC Symbol;Acc:HGNC:8127]
94. GFPT1 ENSGALG00000036391 14025 0.826 - - - - 0.826 - - - - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
95. PTPN12 9302 0.825 - - - - 0.825 - - - - - protein tyrosine phosphatase, non-receptor type 12
96. PCBP4 ENSGALG00000027695 7937 0.824 - - - - 0.824 - - - - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
97. EXO1 ENSGALG00000010748 7572 0.824 - - - - 0.824 - - - - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
98. RPL24 ENSGALG00000015339 227460 0.823 - - - - 0.823 - - - - - ribosomal protein L24 [Source:NCBI gene;Acc:418401]
99. OLA1 ENSGALG00000009325 26414 0.821 - - - - 0.821 - - - - - Obg like ATPase 1 [Source:NCBI gene;Acc:424144]
100. AATF ENSGALG00000005420 6501 0.821 - - - - 0.821 - - - - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]

There are 92 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA