Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RPS13

Gene Name Gene ID Reads Annotation
RPS13 ENSGALG00000006096 170517 ribosomal protein S13 [Source:NCBI gene;Acc:414782]











Genes with expression patterns similar to RPS13

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RPS13 ENSGALG00000006096 170517 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein S13 [Source:NCBI gene;Acc:414782]
2. SESTD1 ENSGALG00000009031 13090 0.83 - - - - 0.830 - - - - - SEC14 and spectrin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18379]
3. MT-ND2 MT-ND2 167831 0.794 - - - - - - 0.794 - - -
4. MYH10 ENSGALG00000001183 26889 0.791 - - - - 0.791 - - - - - myosin, heavy chain 10, non-muscle [Source:NCBI gene;Acc:396465]
5. DDX5 ENSGALG00000003532 75471 0.791 - - - - - - 0.791 - - - DEAD-box helicase 5 [Source:NCBI gene;Acc:395629]
6. NUP43 ENSGALG00000012387 11779 0.783 - - - - - - 0.783 - - - nucleoporin 43 [Source:HGNC Symbol;Acc:HGNC:21182]
7. SNTB1 ENSGALG00000034528 3907 0.781 - - - - - - 0.781 - - - syntrophin beta 1 [Source:NCBI gene;Acc:404774]
8. HUNK ENSGALG00000015879 7227 0.78 - - - - - - 0.780 - - - hormonally up-regulated Neu-associated kinase [Source:HGNC Symbol;Acc:HGNC:13326]
9. DOCK1 ENSGALG00000042259 5438 0.78 - - - - - - 0.780 - - - dedicator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:2987]
10. HES6 ENSGALG00000028415 4830 0.78 - - - - - - 0.780 - - - hes family bHLH transcription factor 6
11. ITGB5 ENSGALG00000029766 5978 0.78 - - - - - - 0.780 - - - integrin subunit beta 5 [Source:NCBI gene;Acc:395142]
12. NAT10 ENSGALG00000014573 12754 0.778 - - - - - - 0.778 - - - N-acetyltransferase 10 [Source:NCBI gene;Acc:426609]
13. PPP6R3 ENSGALG00000007037 10919 0.777 - - - - - - 0.777 - - - protein phosphatase 6 regulatory subunit 3 [Source:NCBI gene;Acc:423116]
14. LOC107057078 ENSGALG00000004725 28489 0.777 - - - - - - 0.777 - - - acyl-CoA dehydrogenase family member 10-like, transcript variant X7
15. SLC25A6 ENSGALG00000016691 76738 0.777 - - - - - - 0.777 - - - solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
16. POLR2K ENSGALG00000036019 8962 0.776 - - - - 0.776 - - - - - RNA polymerase II subunit K [Source:HGNC Symbol;Acc:HGNC:9198]
17. ENSGALG00000012451 ENSGALG00000012451 7912 0.776 - - - - - - 0.776 - - -
18. NDUFA2 ENSGALG00000040626 27899 0.776 - - - - - - 0.776 - - - NADH:ubiquinone oxidoreductase subunit A2 [Source:NCBI gene;Acc:768860]
19. MRPL3 ENSGALG00000040873 21053 0.774 - - - - - - 0.774 - - - mitochondrial ribosomal protein L3 [Source:NCBI gene;Acc:420686]
20. SKP1 ENSGALG00000006474 37807 0.766 - - - - - - 0.766 - - - S-phase kinase-associated protein 1 [Source:NCBI gene;Acc:416319]
21. IMMT ENSGALG00000015783 25009 0.763 - - - - - - 0.763 - - - inner membrane mitochondrial protein [Source:NCBI gene;Acc:422912]
22. SNRNP40 ENSGALG00000000615 32298 0.763 - - - - - - - - - 0.763 small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
23. PELI1 ENSGALG00000008837 11561 0.762 - - - - - - - - - 0.762 pellino E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421279]
24. PRPS1 ENSGALG00000004908 27994 0.752 - - - - - - - - - 0.752 phosphoribosyl pyrophosphate synthetase 1
25. NUCKS1 ENSGALG00000000708 80882 0.751 - - - - 0.751 - - - - - nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:NCBI gene;Acc:404775]
26. PTP4A2 ENSGALG00000003265 24826 0.749 - - - - - - - - - 0.749 protein tyrosine phosphatase type IVA, member 2 [Source:HGNC Symbol;Acc:HGNC:9635]
27. RPL35 ENSGALG00000035677 252113 0.748 0.748 - - - - - - - - - ribosomal protein L35 [Source:NCBI gene;Acc:374133]
28. PUM1 ENSGALG00000042598 9392 0.746 - - - - - - - - - 0.746 pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
29. AIRC AIRC 15851 0.746 - - - - - - - 0.746 - -
30. EIF4A3 ENSGALG00000008530 53964 0.745 - - - - - - 0.745 - - - eukaryotic translation initiation factor 4A3 [Source:NCBI gene;Acc:416704]
31. CIRBP ENSGALG00000030918 309258 0.734 0.734 - - - - - - - - - cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
32. CHTOP ENSGALG00000042129 24112 0.734 - - - - - - - - - 0.734 chromatin target of PRMT1 [Source:HGNC Symbol;Acc:HGNC:24511]
33. DHX38 ENSGALG00000000787 6913 0.731 - - - - - - - - - 0.731 DEAH-box helicase 38 [Source:NCBI gene;Acc:415875]
34. HNRNPLL ENSGALG00000008504 14719 0.729 - - - - - - - - - 0.729 heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
35. NUSAP1 ENSGALG00000008584 9955 0.729 - - - - 0.729 - - - - - nucleolar and spindle associated protein 1 [Source:NCBI gene;Acc:423213]
36. DNAJC7 ENSGALG00000042796 14597 0.728 - - - - 0.728 - - - - - DnaJ heat shock protein family (Hsp40) member C7 [Source:NCBI gene;Acc:428312]
37. ATP6V1E1 ENSGALG00000013036 13497 0.726 - - - - - - 0.726 - - - ATPase H+ transporting V1 subunit E1 [Source:NCBI gene;Acc:418162]
38. RPL18A 278781 0.724 - - 0.724 - - - - - - - ribosomal protein L18a
39. PEBP1 ENSGALG00000007403 77502 0.724 - - - - - - - - - 0.724 phosphatidylethanolamine binding protein 1 [Source:NCBI gene;Acc:416990]
40. SNRPG ENSGALG00000028409 122813 0.719 - - 0.719 - - - - - - - small nuclear ribonucleoprotein polypeptide G [Source:NCBI gene;Acc:771344]
41. EIF3I ENSGALG00000003337 28832 0.717 - - - - 0.717 - - - - - eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
42. AP3S1 ENSGALG00000002341 12388 0.713 - - - - - - - - - 0.713 adaptor related protein complex 3 sigma 1 subunit [Source:NCBI gene;Acc:427389]
43. DAP3 ENSGALG00000019796 13278 0.713 - - - - - - - - - 0.713 death associated protein 3 [Source:HGNC Symbol;Acc:HGNC:2673]
44. XPA ENSGALG00000028998 8621 0.71 - - - - - - - - - 0.710 XPA, DNA damage recognition and repair factor [Source:NCBI gene;Acc:395659]
45. SAAL1 ENSGALG00000026111 8340 0.71 - - - - 0.710 - - - - - serum amyloid A like 1
46. LRP11 ENSGALG00000019987 3341 0.707 - - - - 0.707 - - - - - LDL receptor related protein 11 [Source:HGNC Symbol;Acc:HGNC:16936]
47. UBE2E3 ENSGALG00000020793 9517 0.705 - - - - - - - - - 0.705 ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
48. TUBB2B ENSGALG00000012821 41535 0.705 - - - - 0.705 - - - - - tubulin beta 2B class IIb [Source:NCBI gene;Acc:420883]
49. HNRNPA2B1 ENSGALG00000011036 53662 0.701 - - - - - - - - - 0.701 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:NCBI gene;Acc:420627]
50. PPP4R2 ENSGALG00000007810 15127 0.7 - - - - - - - - - 0.700 protein phosphatase 4 regulatory subunit 2 [Source:NCBI gene;Acc:416098]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA