Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for RPS11

Gene Name Gene ID Reads Annotation
RPS11 ENSDARG00000053058 32 ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]










Genes with expression patterns similar to RPS11

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RPS11 ENSDARG00000053058 32 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
2. ciz1a ENSDARG00000089781 20 2.866 1.000 0.900 - - 0.966 - - - - cdkn1a interacting zinc finger protein 1a [Source:ZFIN;Acc:ZDB-GENE-100922-222]
3. BX511006.2 BX511006.2 29 2.618 0.723 0.900 - - 0.995 - - - -
4. opn5 ENSDARG00000070110 18 1.94 1.000 - - - - 0.940 - - - opsin 5 [Source:ZFIN;Acc:ZDB-GENE-041001-179]
5. prelp ENSDARG00000070597 99 1.921 1.000 - - 0.921 - - - - - proline/arginine-rich end leucine-rich repeat protein [Source:ZFIN;Acc:ZDB-GENE-080327-24]
6. BX088525.2 ENSDARG00000117222 11 1.91 - 0.910 - - - - - - 1.000
7. CR318593.1_1 CR318593.1_1 8 1.9 1.000 0.900 - - - - - - -
8. zdhhc23b ENSDARG00000003899, ENSDARG00000116894 31 1.9 1.000 0.900 - - - - - - - zinc finger, DHHC-type containing 23b [Source:ZFIN;Acc:ZDB-GENE-040808-13]
9. l3mbtl3 ENSDARG00000025983 12 1.9 - 0.900 - - - - - - 1.000 l(3)mbt-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040724-127]
10. zgc:113162 ENSDARG00000052923 62 1.892 - 0.947 - - - - - 0.945 - zgc:113162 [Source:ZFIN;Acc:ZDB-GENE-050522-530]
11. si:dkey-4j21.1 17 1.867 - 0.900 - - - - - 0.967 - si:dkey-4j21.1, transcript variant X2
12. TULP2 TULP2 38 1.858 - 0.900 - - - 0.958 - - -
13. CU855821.2 CU855821.2 21 1.853 - 0.900 - - - 0.953 - - -
14. MXRA5 MXRA5 58 1.822 - 0.846 - - - 0.976 - - -
15. tmeff2b ENSDARG00000058699 82 1.818 - 0.900 - - - 0.918 - - - transmembrane protein with EGF-like and two follistatin-like domains 2b [Source:ZFIN;Acc:ZDB-GENE-101001-4]
16. CABZ01033130.1 CABZ01033130.1 5 1.817 - - - 0.817 - - - - 1.000
17. calb2a ENSDARG00000041062, ENSDARG00000110220 459 1.811 0.911 0.900 - - - - - - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
18. zgc:110434_1 30 1.811 0.871 - - - - 0.940 - - - zgc:110434
19. si:dkey-156m18.1 si:dkey-156m18.1 13 1.8 1.000 0.800 - - - - - - -
20. stk19 ENSDARG00000086628 85 1.796 - 0.947 - - - 0.849 - - - serine/threonine kinase 19 [Source:ZFIN;Acc:ZDB-GENE-000616-11]
21. pvrl4 155 1.791 - - - - - 0.942 - 0.849 - poliovirus receptor-related 4
22. zgc:110789 ENSDARG00000052497, ENSDARG00000111073 171 1.781 1.000 - - - - 0.781 - - - zgc:110789 [Source:ZFIN;Acc:ZDB-GENE-050306-38]
23. FAM124B ENSDARG00000087489 16 1.777 - - - 0.822 - - - 0.955 - family with sequence similarity 124B [Source:ZFIN;Acc:ZDB-GENE-130327-1]
24. swt1 ENSDARG00000094010 472 1.774 - - - - - 0.882 - 0.892 - SWT1 RNA endoribonuclease homolog [Source:ZFIN;Acc:ZDB-GENE-041015-373]
25. glt8d2 ENSDARG00000057942, ENSDARG00000111260 34 1.767 - 0.947 - - - 0.820 - - - glycosyltransferase 8 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041210-98]
26. impact ENSDARG00000043288 7 1.753 - - - - 0.997 - - - 0.756 impact RWD domain protein [Source:ZFIN;Acc:ZDB-GENE-040927-10]
27. hpse ENSDARG00000063634, ENSDARG00000112827 35 1.748 0.823 - - - - 0.925 - - - heparanase [Source:ZFIN;Acc:ZDB-GENE-041111-200]
28. ZNF648 ENSDARG00000104823 194 1.746 - 0.900 - - 0.846 - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
29. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1.735 - 0.900 - - 0.835 - - - -
30. CR847504.1 ENSDARG00000102515 29 1.711 - 0.900 - - - 0.811 - - -
31. SLC7A8 SLC7A8 25 1.71 - 0.900 - 0.810 - - - - -
32. cx45.6 cx45.6 26 1.686 - 0.947 - - 0.739 - - - -
33. hsd17b7 ENSDARG00000088140 185 1.685 - 0.814 - - - 0.871 - - - hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]
34. col17a1a ENSDARG00000069415 52 1.68 - - - 0.831 - 0.849 - - - collagen, type XVII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090313-107]
35. APOL4 APOL4 27 1.676 0.794 - - - 0.882 - - - -
36. tmem175 ENSDARG00000076376, ENSDARG00000111449 136 1.675 0.765 - - - - - - 0.910 - transmembrane protein 175 [Source:ZFIN;Acc:ZDB-GENE-070705-79]
37. si:ch211-263m18.4 ENSDARG00000093353 27 1.665 0.765 0.900 - - - - - - - si:ch211-263m18.4 [Source:ZFIN;Acc:ZDB-GENE-030131-5341]
38. inpp5e ENSDARG00000103926 567 1.663 0.934 - - - 0.729 - - - - inositol polyphosphate-5-phosphatase E [Source:ZFIN;Acc:ZDB-GENE-050809-23]
39. lpar6b ENSDARG00000069441 65 1.651 - 0.729 - - 0.922 - - - - lysophosphatidic acid receptor 6b [Source:ZFIN;Acc:ZDB-GENE-110408-67]
40. iqcb1 ENSDARG00000101032 310 1.64 0.751 - - - - 0.889 - - - IQ motif containing B1 [Source:ZFIN;Acc:ZDB-GENE-041212-47]
41. si:ch211-255a21.4 si:ch211-255a21.4 26 1.634 - 0.900 - 0.734 - - - - -
42. zgc:174697 zgc:174697 128 1.629 0.729 0.900 - - - - - - -
43. clul1 ENSDARG00000055595 103 1.613 - 0.899 - - 0.714 - - - - clusterin-like 1 (retinal) [Source:ZFIN;Acc:ZDB-GENE-031118-57]
44. coasy ENSDARG00000042747 336 1.608 - - - - - 0.846 - 0.762 - CoA synthase [Source:ZFIN;Acc:ZDB-GENE-040912-137]
45. si:ch211-245n8.4 ENSDARG00000096222 230 1.607 0.801 - - - - - - 0.806 - si:ch211-245n8.4 [Source:ZFIN;Acc:ZDB-GENE-110914-56]
46. pigu ENSDARG00000075530 348 1.586 - - - - - 0.770 - 0.816 - phosphatidylinositol glycan anchor biosynthesis, class U [Source:ZFIN;Acc:ZDB-GENE-100629-1]
47. si:dkey-93n13.2 ENSDARG00000092816 119 1.58 0.778 - - - - 0.802 - - - si:dkey-93n13.2 [Source:ZFIN;Acc:ZDB-GENE-091204-177]
48. ARHGEF15 ENSDARG00000100293 553 1.579 - - - - - 0.740 - 0.839 - Rho guanine nucleotide exchange factor (GEF) 15 [Source:ZFIN;Acc:ZDB-GENE-060526-292]
49. NSUN6 ENSDARG00000103478 29 1.575 0.823 - - 0.752 - - - - - NOL1/NOP2/Sun domain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-080808-8]
50. dusp22b ENSDARG00000039850 133 1.569 0.756 - - - - - - 0.813 - dual specificity phosphatase 22b [Source:ZFIN;Acc:ZDB-GENE-050417-257]
51. BCL2 BCL2 122 1.55 0.769 0.781 - - - - - - -
52. qrsl1 ENSDARG00000032704 200 1.55 - 0.704 - - - 0.846 - - - glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5540]
53. AL935186.6 ENSDARG00000112275 5 1.55 0.838 0.712 - - - - - - -
54. zgc:91811 zgc:91811 186 1.539 0.744 - - - - 0.795 - - -
55. si:ch211-243a20.3 ENSDARG00000092240 151 1.534 - 0.800 - - - 0.734 - - - si:ch211-243a20.3 [Source:ZFIN;Acc:ZDB-GENE-061207-28]
56. mitfa ENSDARG00000003732 1288 1.509 0.731 - - - - 0.778 - - - microphthalmia-associated transcription factor a [Source:ZFIN;Acc:ZDB-GENE-990910-11]
57. GPR17 ENSDARG00000062030 713 1.503 0.743 - - - - - - 0.760 - G protein-coupled receptor 17 [Source:ZFIN;Acc:ZDB-GENE-100922-133]
58. kcnk18 ENSDARG00000057049, ENSDARG00000110571, ENSDARG00000112385 118 1.483 0.761 0.722 - - - - - - - potassium channel, subfamily K, member 18 [Source:ZFIN;Acc:ZDB-GENE-100405-2]
59. cx28.6 ENSDARG00000003925 146 1.474 - - - - - 0.731 - 0.743 - connexin 28.6 [Source:ZFIN;Acc:ZDB-GENE-040406-4]
60. kcnc1a ENSDARG00000051852 317 1.455 0.713 - - - - 0.742 - - - potassium voltage-gated channel, Shaw-related subfamily, member 1a [Source:ZFIN;Acc:ZDB-GENE-061220-10]
61. APOLD1_1 APOLD1_1 590 1.424 0.705 - - - 0.719 - - - -
62. CABZ01029822.1 ENSDARG00000086931 1654 1.422 - 0.705 - - 0.717 - - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
63. ca4b ENSDARG00000042293 5 1 1.000 - - - - - - - - carbonic anhydrase IV b [Source:ZFIN;Acc:ZDB-GENE-080815-5]
64. cga ENSDARG00000040479 3 1 - - - - - - - - 1.000 glycoprotein hormones, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040715-2]
65. myl2b ENSDARG00000053424 226 1 1.000 - - - - - - - - myosin, light chain 2b, regulatory, cardiac, slow [Source:ZFIN;Acc:ZDB-GENE-060331-137]
66. CR388013.1 CR388013.1 3 1 - - - - - - - - 1.000
67. gsx2 ENSDARG00000043322, ENSDARG00000116417 329 1 1.000 - - - - - - - - GS homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-041001-114]
68. elfn2 elfn2 1 1 1.000 - - - - - - - -
69. cntn5 ENSDARG00000021584 30 1 1.000 - - - - - - - - contactin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-5640]
70. atxn1b ENSDARG00000060862 345 1 1.000 - - - - - - - - ataxin 1b [Source:ZFIN;Acc:ZDB-GENE-061218-2]
71. CR848032.2 CR848032.2 0 1 - - - - - - - - 1.000
72. fam101a 4 1 - - - - - - - - 1.000 family with sequence similarity 101, member A
73. CR352256.1 CR352256.1 3 1 - - - - - - - - 1.000
74. ldlrad4 ldlrad4 0 1 - - - - - - - - 1.000
75. fam19a5 fam19a5 8 1 1.000 - - - - - - - -
76. BX004980.1 ENSDARG00000099680 10 1 - - - - - - - - 1.000
77. pou1f1 ENSDARG00000058924, ENSDARG00000110816, ENSDARG00000115109 17 1 - - - - - - - - 1.000 POU class 1 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040630-7]
78. ch25hl2 ENSDARG00000038728 100 1 1.000 - - - - - - - - cholesterol 25-hydroxylase like 2 [Source:ZFIN;Acc:ZDB-GENE-080204-82]
79. si:dkey-208k22.1 si:dkey-208k22.1 1 1 - - - - - - - - 1.000
80. ABCA7 ABCA7 12 1 1.000 - - - - - - - -
81. pls1 ENSDARG00000039272 39 1 1.000 - - - - - - - - plastin 1 (I isoform) [Source:ZFIN;Acc:ZDB-GENE-030131-6205]
82. mlc1 ENSDARG00000063026 29 1 1.000 - - - - - - - - megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:ZFIN;Acc:ZDB-GENE-050419-145]
83. si:dkey-199m13.1 si:dkey-199m13.1 3 1 - - - - - - - - 1.000
84. gh1 ENSDARG00000038185 1 1 - - - - - - - - 1.000 growth hormone 1 [Source:ZFIN;Acc:ZDB-GENE-030725-2]
85. hel_dr4 hel_dr4 12 1 - - - - - - - - 1.000
86. si:ch211-227e10.2 ENSDARG00000100414 1 1 - - - - - - - - 1.000 si:ch211-227e10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-8]
87. spry1 ENSDARG00000103985 0 1 - - - - - - - - 1.000 sprouty homolog 1, antagonist of FGF signaling (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-081215-2]
88. guca1d ENSDARG00000044629, ENSDARG00000115722 22 1 - - - - - - - - 1.000 guanylate cyclase activator 1d [Source:ZFIN;Acc:ZDB-GENE-040724-231]
89. prop1 ENSDARG00000039756, ENSDARG00000109950, ENSDARG00000114449 10 1 - - - - - - - - 1.000 PROP paired-like homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-081107-40]
90. usp47 ENSDARG00000102645 16 1 1.000 - - - - - - - - ubiquitin specific peptidase 47 [Source:ZFIN;Acc:ZDB-GENE-070719-7]
91. si:dkey-57k2.7 ENSDARG00000060395, ENSDARG00000095191 5 1 1.000 - - - - - - - - si:dkey-57k2.7 [Source:ZFIN;Acc:ZDB-GENE-070912-559]
92. CR942805.1 CR942805.1 94 1 - - - - - - - - 1.000
93. sdccag3 239 1 1.000 - - - - - - - - serologically defined colon cancer antigen 3, transcript variant X2
94. mms19 ENSDARG00000079067 65 1 1.000 - - - - - - - - MMS19 homolog, cytosolic iron-sulfur assembly component [Source:ZFIN;Acc:ZDB-GENE-120316-2]
95. asic4b ENSDARG00000004243 31 1 1.000 - - - - - - - - acid-sensing (proton-gated) ion channel family member 4b [Source:ZFIN;Acc:ZDB-GENE-040513-6]
96. KCNAB1 KCNAB1 918 1 1.000 - - - - - - - -
97. xdh ENSDARG00000055240 250 1 1.000 - - - - - - - - xanthine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070719-9]
98. si:dkey-217f16.3 si:dkey-217f16.3 1 1 1.000 - - - - - - - -
99. drd2l ENSDARG00000014858 1 1 1.000 - - - - - - - - dopamine receptor D2 like [Source:ZFIN;Acc:ZDB-GENE-030910-1]
100. INTS5 ENSDARG00000077943 0 1 - - - - - - - - 1.000 integrator complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-090908-2]

There are 1522 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA