Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RPRD1A

Gene Name Gene ID Reads Annotation
RPRD1A ENSDARG00000104861 2560 regulation of nuclear pre-mRNA domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-141211-20]










Genes with expression patterns similar to RPRD1A

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RPRD1A ENSDARG00000104861 2560 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 regulation of nuclear pre-mRNA domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-141211-20]
2. higd2a ENSDARG00000052371 7354 2.534 - - - - - - 0.711 0.945 0.878 HIG1 hypoxia inducible domain family, member 2A [Source:ZFIN;Acc:ZDB-GENE-050417-119]
3. rpz5 ENSDARG00000075718 1703 1.877 - - - - - - - 0.966 0.911 rapunzel 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4678]
4. acaa2 ENSDARG00000038881 2649 1.83 - - - - - - 0.845 0.985 - acetyl-CoA acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1996]
5. fam89a ENSDARG00000079979 4375 1.807 - - - - - - 0.862 0.945 - family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
6. ppdpfa ENSDARG00000007682 3214 1.805 - - - - - - 0.834 0.971 - pancreatic progenitor cell differentiation and proliferation factor a [Source:ZFIN;Acc:ZDB-GENE-030219-204]
7. ezrb ENSDARG00000025091 2861 1.78 - - - - - - 0.812 0.968 - ezrin b [Source:ZFIN;Acc:ZDB-GENE-050803-1]
8. ARID3C ENSDARG00000067729, ENSDARG00000114447 8069 1.758 - - - - - - - 0.952 0.806 AT rich interactive domain 3C (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-060526-12]
9. sft2d1 ENSDARG00000007362 1763 1.757 - - - - - - - 0.979 0.778 SFT2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1350]
10. copb2 ENSDARG00000038743, ENSDARG00000114286 6404 1.732 - - - - - - 0.751 0.981 - coatomer protein complex, subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-010724-7]
11. commd4 ENSDARG00000061946 3281 1.724 - 0.730 - - - - - 0.994 - COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
12. ZBTB11 ENSDARG00000017886 817 1.718 - - - - - - 0.723 0.995 - zinc finger and BTB domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5055]
13. galnt12 ENSDARG00000055490 1653 1.715 - - - - - - 0.728 0.987 - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 [Source:ZFIN;Acc:ZDB-GENE-060503-704]
14. brd1b ENSDARG00000051798 1712 1.714 - - - - - - 0.738 0.976 - bromodomain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070209-98]
15. MRPS12_1 MRPS12_1 2714 1.711 - 0.716 - - - - - 0.995 -
16. lman1 ENSDARG00000069980 2550 1.701 - - - - - - 0.713 0.988 - lectin, mannose-binding, 1 [Source:ZFIN;Acc:ZDB-GENE-060201-4]
17. mfap2 ENSDARG00000059367 3774 1.698 0.745 - - - - - - 0.953 - microfibril associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6710]
18. helz ENSDARG00000030560 3259 1.696 - - - - - - 0.810 - 0.886 helicase with zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-2419]
19. AKAP2 AKAP2 4178 1.693 - - - - - 0.711 - 0.982 -
20. grhl3 ENSDARG00000078552 897 1.693 - - - - - - 0.713 0.980 - grainyhead-like transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9854]
21. rcor1 ENSDARG00000031434 2733 1.691 - - - - - - 0.788 0.903 - REST corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-050506-79]
22. fbxo28 ENSDARG00000027159 9602 1.686 - - - - - - 0.749 0.937 - F-box protein 28 [Source:ZFIN;Acc:ZDB-GENE-030131-4665]
23. si:dkey-118j18.2 ENSDARG00000096457 5293 1.679 - 0.736 - - - - - 0.943 - si:dkey-118j18.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8692]
24. bambib ENSDARG00000099677 4267 1.671 - - - - - - 0.711 0.960 - BMP and activin membrane-bound inhibitor homolog (Xenopus laevis) b [Source:ZFIN;Acc:ZDB-GENE-040704-30]
25. farp2 ENSDARG00000016429 3133 1.67 - - - - - - 0.700 0.970 - FERM, RhoGEF and pleckstrin domain protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2993]
26. s100u ENSDARG00000071014 4754 1.655 - - - - - - 0.712 0.943 - S100 calcium binding protein U [Source:ZFIN;Acc:ZDB-GENE-030131-3121]
27. slmo2 slmo2 5559 1.654 - - - - - - 0.785 0.869 -
28. RB1CC1 ENSDARG00000076559 2771 1.652 - 0.727 - - - - - - 0.925 RB1-inducible coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-130206-1]
29. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.617 - - - - - - 0.852 - 0.765 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
30. ephb4a ENSDARG00000100725 1749 1.607 - 0.822 - - - - - - 0.785 eph receptor B4a [Source:ZFIN;Acc:ZDB-GENE-990415-62]
31. CARD11 ENSDARG00000052741 249 1.605 - - - - - - 0.825 - 0.780 caspase recruitment domain family, member 11 [Source:ZFIN;Acc:ZDB-GENE-100219-1]
32. RNF5 ENSDARG00000075606 1730 1.604 - - - - - - 0.800 - 0.804 ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
33. gpx7 ENSDARG00000091511 3045 1.6 - - - - - - 0.739 0.861 - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
34. vangl2 ENSDARG00000027397 2418 1.598 - 0.703 - - - - 0.895 - - VANGL planar cell polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-020507-3]
35. dynlrb1 ENSDARG00000021582, ENSDARG00000104233 6310 1.596 - - - - - - 0.803 - 0.793 dynein, light chain, roadblock-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-989]
36. zgc:136439 ENSDARG00000009267 720 1.585 - - - - - - 0.795 - 0.790 zgc:136439 [Source:ZFIN;Acc:ZDB-GENE-060421-2858]
37. CABZ01101003.1 CABZ01101003.1 858 1.583 - 0.790 - - - - - - 0.793
38. sar1b ENSDARG00000103403 1699 1.58 - - - - - - 0.787 - 0.793 secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
39. ap2m1a ENSDARG00000002790 9781 1.579 - 0.830 - - - - - - 0.749 adaptor related protein complex 2 subunit mu 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9784]
40. agpat4 ENSDARG00000069044 4487 1.578 - - - - - - 0.780 - 0.798 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1924]
41. ccdc90b ENSDARG00000044626, ENSDARG00000110887 501 1.576 - - - - - - 0.782 - 0.794 coiled-coil domain containing 90B [Source:ZFIN;Acc:ZDB-GENE-040724-162]
42. rac2 ENSDARG00000038010 5837 1.564 - - - - - - 0.794 0.770 - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
43. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.559 - 0.798 - - - - - 0.761 - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
44. ptbp1a ENSDARG00000019362 6290 1.556 - 0.801 - - - - 0.755 - - polypyrimidine tract binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-492]
45. sypl2a ENSDARG00000055307, ENSDARG00000115972 7103 1.552 - 0.802 - - - - 0.750 - - synaptophysin-like 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1434]
46. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 1.544 - 0.725 - - - - 0.819 - - N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
47. arhgap5 ENSDARG00000061294 2228 1.541 - - - - - - 0.788 - 0.753 Rho GTPase activating protein 5 [Source:ZFIN;Acc:ZDB-GENE-081014-1]
48. tmem258 ENSDARG00000078785 9578 1.54 - - - - - - 0.831 - 0.709 transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
49. dazap2 ENSDARG00000007867 1805 1.523 - 0.710 - - - - 0.813 - - DAZ associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3036]
50. dnajc5ab ENSDARG00000004836 2923 1.521 - 0.751 - - - - 0.770 - - DnaJ (Hsp40) homolog, subfamily C, member 5ab [Source:ZFIN;Acc:ZDB-GENE-081021-2]
51. ccdc47 ENSDARG00000054362 5970 1.518 - - - - - 0.815 0.703 - - coiled-coil domain containing 47 [Source:ZFIN;Acc:ZDB-GENE-040912-15]
52. bty bty 752 1.516 - - - - - - 0.743 - 0.773
53. ssh2b ENSDARG00000098955 614 1.515 - - - - - - 0.727 - 0.788 slingshot protein phosphatase 2b [Source:ZFIN;Acc:ZDB-GENE-081205-4]
54. TMC6 TMC6 773 1.51 - - - - - - 0.721 - 0.789
55. golph3 ENSDARG00000052851, ENSDARG00000109334 2114 1.51 - 0.759 - - - - 0.751 - - golgi phosphoprotein 3 [Source:ZFIN;Acc:ZDB-GENE-041010-209]
56. si:ch211-135f11.1 166 1.503 - - - - - - 0.704 - 0.799 si:ch211-135f11.1, transcript variant X3
57. ndc1 ENSDARG00000021120 2417 1.501 - 0.748 - - - - 0.753 - - NDC1 transmembrane nucleoporin [Source:ZFIN;Acc:ZDB-GENE-030131-7176]
58. acads ENSDARG00000030781 1669 1.5 - 0.706 - - - - - - 0.794 acyl-CoA dehydrogenase short chain [Source:ZFIN;Acc:ZDB-GENE-040808-64]
59. MON1B_1 MON1B_1 697 1.5 - - - - - - 0.713 - 0.787
60. zdhhc8b ENSDARG00000018508 1327 1.499 - 0.764 - - - - 0.735 - - zinc finger, DHHC-type containing 8b [Source:ZFIN;Acc:ZDB-GENE-030407-3]
61. st13 ENSDARG00000021973 7787 1.495 - - - - - 0.715 0.780 - - ST13, Hsp70 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5395]
62. stxbp2 ENSDARG00000007603 1646 1.494 - - - - - - 0.728 - 0.766 syntaxin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2482]
63. vcana ENSDARG00000103515 611 1.483 - - - - - - 0.722 - 0.761 versican a [Source:ZFIN;Acc:ZDB-GENE-011023-1]
64. KIF26B KIF26B 901 1.476 - 0.726 - - - - 0.750 - -
65. arhgap42a ENSDARG00000056619, ENSDARG00000116136 865 1.475 - - - - - - 0.700 - 0.775 Rho GTPase activating protein 42a [Source:ZFIN;Acc:ZDB-GENE-030131-8077]
66. ptpn1 ENSDARG00000007923 3647 1.474 - 0.766 - - - - - - 0.708 protein tyrosine phosphatase, non-receptor type 1 [Source:ZFIN;Acc:ZDB-GENE-980605-23]
67. ube2g1b ENSDARG00000069527 5376 1.473 - - - - - 0.731 0.742 - - ubiquitin-conjugating enzyme E2G 1b (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2939]
68. pdcd6ip ENSDARG00000025269 2522 1.471 - - - - - - 0.734 - 0.737 programmed cell death 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2678]
69. pdcd10a ENSDARG00000035054, ENSDARG00000109378 2227 1.47 - 0.744 - - - - 0.726 - - programmed cell death 10a [Source:ZFIN;Acc:ZDB-GENE-040426-1432]
70. nedd8 ENSDARG00000007989 3896 1.469 - - - - - - 0.708 - 0.761 neural precursor cell expressed, developmentally down-regulated 8 [Source:ZFIN;Acc:ZDB-GENE-030616-588]
71. csde1_1 ENSDARG00000074758 2759 1.467 - 0.734 - - - - 0.733 - - cold shock domain containing E1, RNA-binding [Source:ZFIN;Acc:ZDB-GENE-030131-8623]
72. CABZ01045618.2 CABZ01045618.2 1663 1.463 - 0.734 - - - - 0.729 - -
73. syngr2a ENSDARG00000052429 3431 1.451 - 0.707 - - - - 0.744 - - synaptogyrin 2a [Source:ZFIN;Acc:ZDB-GENE-070112-1292]
74. fam53b ENSDARG00000016156 2143 1.448 - 0.720 - - - - 0.728 - - family with sequence similarity 53, member B [Source:ZFIN;Acc:ZDB-GENE-040426-2495]
75. csnk1g2b ENSDARG00000034056, ENSDARG00000114050 3502 1.447 - 0.723 - - - - 0.724 - - casein kinase 1, gamma 2b [Source:ZFIN;Acc:ZDB-GENE-060825-285]
76. ctdsp2 ENSDARG00000036102, ENSDARG00000110420 4625 1.434 - - - - - - 0.702 - 0.732 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-184]
77. hipk2 ENSDARG00000042518, ENSDARG00000111166 3099 1.431 - 0.730 - - - - - - 0.701 homeodomain interacting protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-031125-4]
78. dcp1a ENSDARG00000100136 714 0.996 - - - - - - - 0.996 - decapping mRNA 1A [Source:ZFIN;Acc:ZDB-GENE-030723-5]
79. pex19 ENSDARG00000004891 2317 0.996 - - - - - - - 0.996 - peroxisomal biogenesis factor 19 [Source:ZFIN;Acc:ZDB-GENE-050417-424]
80. PEG3_38 PEG3_38 521 0.995 - - - - - - - 0.995 -
81. porcnl_1 ENSDARG00000052455 683 0.995 - - - - - - - 0.995 - porcupine O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-030131-5931]
82. ddr2l ENSDARG00000103830 1921 0.995 - - - - - - - 0.995 - discoidin domain receptor family, member 2, like [Source:ZFIN;Acc:ZDB-GENE-041210-162]
83. CU694256.1 ENSDARG00000097007 290 0.995 - - - - - - - 0.995 -
84. zgc:174273 zgc:174273 374 0.995 - - - - - - - 0.995 -
85. wipf1 wipf1 760 0.995 - - - - - - - 0.995 -
86. si:ch211-165d12.4 ENSDARG00000079353 330 0.995 - - - - - - - 0.995 - si:ch211-165d12.4 [Source:ZFIN;Acc:ZDB-GENE-080303-7]
87. ZNF337_3 ZNF337_3 561 0.995 - - - - - - - 0.995 -
88. smad9 368 0.995 - - - - - - - 0.995 - SMAD family member 9, transcript variant X1
89. ncs1b ENSDARG00000054186 252 0.995 - - - - - - - 0.995 - neuronal calcium sensor 1b [Source:ZFIN;Acc:ZDB-GENE-050930-1]
90. slc25a42 ENSDARG00000099368 2420 0.995 - - - - - - - 0.995 - solute carrier family 25, member 42 [Source:ZFIN;Acc:ZDB-GENE-060825-313]
91. pgd ENSDARG00000015343, ENSDARG00000117150 2512 0.994 - - - - - - - 0.994 - phosphogluconate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2807]
92. stx4 ENSDARG00000052518 1848 0.994 - - - - - - - 0.994 - syntaxin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-2455]
93. slco3a1 ENSDARG00000018726 590 0.994 - - - - - - - 0.994 - solute carrier organic anion transporter family, member 3A1 [Source:ZFIN;Acc:ZDB-GENE-030131-8662]
94. pknox1.1 ENSDARG00000018765 2149 0.994 - - - - - - - 0.994 - pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
95. trpm4 trpm4 501 0.994 - - - - - - - 0.994 -
96. snap29 ENSDARG00000038518 1609 0.993 - - - - - - - 0.993 - synaptosomal-associated protein 29 [Source:ZFIN;Acc:ZDB-GENE-041111-226]
97. frmd6 ENSDARG00000002332 2698 0.993 - - - - - - - 0.993 - FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
98. lipin2 2021 0.993 - - - - - - - 0.993 - lipin 2, transcript variant X2
99. mccc1 ENSDARG00000102538, ENSDARG00000115996 2069 0.993 - - - - - - - 0.993 - methylcrotonoyl-CoA carboxylase 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-050208-450]
100. bnip4 ENSDARG00000022832, ENSDARG00000117207 3100 0.993 - - - - - - - 0.993 - BCL2 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-051113-212]

There are 1169 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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