Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RPP40

Gene Name Gene ID Reads Annotation
RPP40 ENSGALG00000036074 2068 ribonuclease P/MRP subunit p40 [Source:HGNC Symbol;Acc:HGNC:20992]











Genes with expression patterns similar to RPP40

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RPP40 ENSGALG00000036074 2068 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribonuclease P/MRP subunit p40 [Source:HGNC Symbol;Acc:HGNC:20992]
2. DAD1 ENSGALG00000035626 32604 1.575 - - - - - - 0.800 0.775 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
3. NDUFA12 ENSGALG00000011325 19807 1.553 - - - - - - 0.733 0.820 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
4. SPCS1 ENSGALG00000001655 7718 1.535 - - - - - - 0.733 0.802 - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
5. TSTD1 TSTD1 3613 1.535 - - - - - - 0.752 0.783 - -
6. MRPL2 ENSGALG00000008597 16500 1.484 - - - - - - 0.757 0.727 - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
7. MOCS2 ENSGALG00000014906 4974 1.477 - - - - - - - 0.722 0.755 - molybdenum cofactor synthesis 2 [Source:HGNC Symbol;Acc:HGNC:7193]
8. CWC27 ENSGALG00000014747 8389 1.465 - - - - - - 0.718 0.747 - - CWC27 spliceosome associated protein homolog [Source:HGNC Symbol;Acc:HGNC:10664]
9. C1H12ORF73 ENSGALG00000030933 5195 1.46 - - - - - - 0.737 0.723 - - chromosome 1 open reading frame, human C12orf73 [Source:NCBI gene;Acc:772057]
10. GPR161 ENSGALG00000015247 3473 1.459 - - - - - - 0.713 0.746 - - G protein-coupled receptor 161 [Source:HGNC Symbol;Acc:HGNC:23694]
11. COBRA1 COBRA1 4600 1.457 - - - - - - 0.735 0.722 - -
12. DNAL4 ENSGALG00000043451 4469 1.447 - - - - - - 0.729 0.718 - - dynein axonemal light chain 4 [Source:NCBI gene;Acc:418019]
13. C11H16ORF80 C11H16ORF80 18673 1.42 - - - - - - 0.720 0.700 - -
14. METTL8 ENSGALG00000009564 912 0.852 - - - - - - - 0.852 - - methyltransferase like 8 [Source:HGNC Symbol;Acc:HGNC:25856]
15. C1H21ORF91 ENSGALG00000028290 5550 0.847 - - - - - - - 0.847 - - chromosome 1 open reading frame, human C21orf91 [Source:NCBI gene;Acc:395489]
16. PPP2R5D ENSGALG00000040005 6804 0.842 - - - - - - 0.842 - - - protein phosphatase 2 regulatory subunit B'delta [Source:HGNC Symbol;Acc:HGNC:9312]
17. NASP ENSGALG00000010255 28423 0.839 - - - - - - 0.839 - - - nuclear autoantigenic sperm protein, transcript variant X3
18. GCSH ENSGALG00000032679 29231 0.835 - - - - - - - 0.835 - - glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
19. FCF1 ENSGALG00000010275 24928 0.831 - - - - - - 0.831 - - - FCF1, rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]
20. CTNNBL1 ENSGALG00000006817 6765 0.828 - - - - - - - 0.828 - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
21. METTL21A ENSGALG00000008493 3188 0.824 - - - - - - - 0.824 - - methyltransferase like 21A [Source:NCBI gene;Acc:424094]
22. TRIP13 ENSGALG00000033834 6590 0.822 - - - - - - 0.822 - - - thyroid hormone receptor interactor 13 [Source:NCBI gene;Acc:420798]
23. ADRM1 ENSGALG00000005200 5417 0.819 - - - - - - 0.819 - - - adhesion regulating molecule 1 [Source:NCBI gene;Acc:395365]
24. DNAJA4 ENSGALG00000036850 6847 0.815 - - - - - - - 0.815 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
25. NIP7 ENSGALG00000000650 23932 0.815 - - - - - - - 0.815 - - NIP7, nucleolar pre-rRNA processing protein [Source:NCBI gene;Acc:415863]
26. TRAF3IP1 ENSGALG00000004236 7094 0.814 - - - - - - - 0.814 - - TRAF3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:17861]
27. C4orf27 C4orf27 16724 0.814 - - - - - - - 0.814 - -
28. RSRC1 ENSGALG00000009669 5829 0.812 - - - - - - - 0.812 - - arginine and serine rich coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:24152]
29. CHRAC1 ENSGALG00000040823 5695 0.809 - - - - - - - 0.809 - - chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
30. DCTD ENSGALG00000010674 8396 0.808 - - - - - - - 0.808 - - dCMP deaminase [Source:NCBI gene;Acc:422556]
31. PCTP ENSGALG00000003099 5851 0.805 - - - - - - - 0.805 - - phosphatidylcholine transfer protein [Source:HGNC Symbol;Acc:HGNC:8752]
32. CDK5RAP2 ENSGALG00000041102 4042 0.805 - - - - - - - 0.805 - - CDK5 regulatory subunit associated protein 2 [Source:HGNC Symbol;Acc:HGNC:18672]
33. CASP6 ENSGALG00000012186 6639 0.803 - - - - - - - 0.803 - - caspase 6 [Source:NCBI gene;Acc:395477]
34. TMEM165 ENSGALG00000027886 5468 0.801 - - - - - - - 0.801 - - transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
35. TAF3 ENSGALG00000006731 15569 0.801 - - - - - - 0.801 - - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
36. GABPB1 ENSGALG00000023440 5676 0.801 - - - - - - - 0.801 - - GA binding protein transcription factor beta subunit 1 [Source:NCBI gene;Acc:415453]
37. EMC3 ENSGALG00000003738 10363 0.798 - - - - - - - 0.798 - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
38. SNX7 ENSGALG00000005478 4736 0.797 - - - - - - - 0.797 - - sorting nexin 7 [Source:HGNC Symbol;Acc:HGNC:14971]
39. SLU7 ENSGALG00000034414 5386 0.797 - - - - - - - 0.797 - - SLU7 homolog, splicing factor [Source:NCBI gene;Acc:416157]
40. TMEM14A ENSGALG00000019894 5279 0.797 - - - - - - - 0.797 - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
41. CTNND2 ENSGALG00000013001 11217 0.796 - - - - - - 0.796 - - - catenin delta 2 [Source:HGNC Symbol;Acc:HGNC:2516]
42. UTP18 ENSGALG00000002985 7129 0.795 - - - - - - - 0.795 - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
43. PUS1 ENSGALG00000002354 10153 0.794 - - - - - - - 0.794 - - pseudouridylate synthase 1 [Source:HGNC Symbol;Acc:HGNC:15508]
44. TERF2 ENSGALG00000000657 7865 0.794 - - - - - - 0.794 - - - telomeric repeat binding factor 2 [Source:NCBI gene;Acc:395598]
45. PAN3 ENSGALG00000017092 5387 0.793 - - - - - - 0.793 - - - poly(A) specific ribonuclease subunit PAN3 [Source:HGNC Symbol;Acc:HGNC:29991]
46. AP1B1 ENSGALG00000042213 4828 0.792 - - - - - - 0.792 - - - adaptor related protein complex 1 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:554]
47. BLMH ENSGALG00000004259 36907 0.792 - - - - - - - 0.792 - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
48. FAM174A ENSGALG00000026203 8369 0.792 - - - - - - - 0.792 - - family with sequence similarity 174 member A [Source:HGNC Symbol;Acc:HGNC:24943]
49. CHDZ CHDZ 10381 0.791 - - - - - - - 0.791 - -
50. NUBPL ENSGALG00000009983 3328 0.79 - - - - - - - 0.790 - - nucleotide binding protein like [Source:HGNC Symbol;Acc:HGNC:20278]
51. OCIAD1 ENSGALG00000014081 12065 0.789 - - - - - - 0.789 - - - OCIA domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16074]
52. NCDN ENSGALG00000002408 6180 0.788 - - - - - - 0.788 - - - neurochondrin [Source:NCBI gene;Acc:419633]
53. INTS8 ENSGALG00000037955 3349 0.787 - - - - - - - 0.787 - - integrator complex subunit 8 [Source:NCBI gene;Acc:420230]
54. NDUFC2 ENSGALG00000029172 26136 0.786 - - - - - - 0.786 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
55. SGOL1 SGOL1 3919 0.786 - - - - - - - 0.786 - -
56. MRPS22 ENSGALG00000005367 8307 0.786 - - - - - - - 0.786 - - mitochondrial ribosomal protein S22 [Source:HGNC Symbol;Acc:HGNC:14508]
57. RSL1D1 ENSGALG00000033690 13638 0.786 - - - - - - 0.786 - - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
58. DSCR3 3583 0.786 - - - - - - - 0.786 - - DSCR3 arrestin fold containing, transcript variant X1
59. SKP1 ENSGALG00000006474 37807 0.785 - - - - - - - 0.785 - - S-phase kinase-associated protein 1 [Source:NCBI gene;Acc:416319]
60. ARHGEF7 ENSGALG00000031009 10090 0.784 - - - - - - 0.784 - - - Rho guanine nucleotide exchange factor 7 [Source:HGNC Symbol;Acc:HGNC:15607]
61. BZW2 ENSGALG00000010809 29213 0.784 - - - - - - - 0.784 - - basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
62. LLPH ENSGALG00000019358 20976 0.783 - - - - - - 0.783 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
63. UTP11L UTP11L 11927 0.782 - - - - - - 0.782 - - -
64. CHCHD4 ENSGALG00000006328 5860 0.782 - - - - - - - 0.782 - - coiled-coil-helix-coiled-coil-helix domain containing 4 [Source:NCBI gene;Acc:416037]
65. RIOK2 ENSGALG00000015288 6280 0.782 - - - - - - - 0.782 - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
66. ZFYVE9 ENSGALG00000010613 2421 0.782 - - - - - - 0.782 - - - zinc finger FYVE-type containing 9 [Source:HGNC Symbol;Acc:HGNC:6775]
67. FAM63B 3793 0.781 - - - - - - 0.781 - - - family with sequence similarity 63 member B
68. ASMTL ENSGALG00000016689 1802 0.781 - - - - - - - 0.781 - - acetylserotonin O-methyltransferase like [Source:HGNC Symbol;Acc:HGNC:751]
69. RPS6KA RPS6KA 6745 0.78 - - - - - - 0.780 - - -
70. CHM ENSGALG00000006906 4953 0.78 - - - - - - - 0.780 - - CHM, Rab escort protein 1 [Source:NCBI gene;Acc:422266]
71. WDR11 ENSGALG00000035013 3393 0.78 - - - - - - 0.780 - - - WD repeat domain 11 [Source:HGNC Symbol;Acc:HGNC:13831]
72. KLHL21 ENSGALG00000035211 6145 0.779 - - - - - - 0.779 - - - kelch like family member 21 [Source:HGNC Symbol;Acc:HGNC:29041]
73. RBMX ENSGALG00000006457 34009 0.779 - - - - - - 0.779 - - - RNA binding motif protein X-linked [Source:NCBI gene;Acc:422248]
74. ENSGALG00000012451 ENSGALG00000012451 7912 0.779 - - - - - - - 0.779 - -
75. R3HDM1 ENSGALG00000012246 6580 0.779 - - - - - - 0.779 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
76. INTS7 ENSGALG00000009843 2395 0.779 - - - - - - - 0.779 - - integrator complex subunit 7 [Source:NCBI gene;Acc:421374]
77. RMND5A ENSGALG00000015815 2903 0.778 - - - - - - - 0.778 - - required for meiotic nuclear division 5 homolog A [Source:NCBI gene;Acc:422920]
78. VPS4B ENSGALG00000012879 6720 0.778 - - - - - - - 0.778 - - vacuolar protein sorting 4 homolog B [Source:NCBI gene;Acc:420901]
79. PRPF3 ENSGALG00000028205 3791 0.777 - - - - - - - 0.777 - - pre-mRNA processing factor 3 [Source:NCBI gene;Acc:426667]
80. P4HA1 ENSGALG00000004325 4703 0.777 - - - - - - 0.777 - - - prolyl 4-hydroxylase subunit alpha 1 [Source:NCBI gene;Acc:423704]
81. HCCS ENSGALG00000005571 4939 0.777 - - - - - - - 0.777 - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
82. SKAP2 ENSGALG00000030081 13746 0.776 - - - - - - 0.776 - - - src kinase associated phosphoprotein 2 [Source:HGNC Symbol;Acc:HGNC:15687]
83. PHF14 ENSGALG00000038041 13687 0.774 - - - - - - - 0.774 - - PHD finger protein 14 [Source:NCBI gene;Acc:420583]
84. C1QBP ENSGALG00000001654 34814 0.774 - - - - - - 0.774 - - - complement C1q binding protein [Source:HGNC Symbol;Acc:HGNC:1243]
85. C1H11ORF73 C1H11ORF73 10071 0.772 - - - - - - - 0.772 - -
86. NUDT7 ENSGALG00000034395 7396 0.772 - - - - - - - 0.772 - - nudix hydrolase 7 [Source:NCBI gene;Acc:415800]
87. MADH2 MADH2 13017 0.772 - - - - - - 0.772 - - -
88. ZNF593 ENSGALG00000000542 79105 0.772 - - - - - - 0.772 - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
89. CYC CYC 8740 0.771 - - - - - - 0.771 - - -
90. RPAP3 ENSGALG00000009743 3380 0.771 - - - - - - - 0.771 - - RNA polymerase II associated protein 3 [Source:NCBI gene;Acc:417811]
91. SPCS2 ENSGALG00000019036 9496 0.771 - - - - - - - 0.771 - - signal peptidase complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:28962]
92. L3MBTL2 ENSGALG00000011976 3941 0.77 - - - - - - - 0.770 - - L3MBTL2, polycomb repressive complex 1 subunit [Source:NCBI gene;Acc:417999]
93. C5orf22 ENSGALG00000012909 3537 0.77 - - - - - - - 0.770 - - chromosome 5 open reading frame 22 [Source:HGNC Symbol;Acc:HGNC:25639]
94. MRPL47 ENSGALG00000013759 9044 0.77 - - - - - - - 0.770 - - mitochondrial ribosomal protein L47 [Source:HGNC Symbol;Acc:HGNC:16652]
95. POMP ENSGALG00000017090 5504 0.769 - - - - - - - 0.769 - - proteasome maturation protein [Source:HGNC Symbol;Acc:HGNC:20330]
96. PPP2R2A ENSGALG00000000235 4263 0.769 - - - - - - 0.769 - - - protein phosphatase 2 regulatory subunit Balpha [Source:NCBI gene;Acc:419523]
97. DFNA5 2932 0.768 - - - - - - - 0.768 - - DFNA5, deafness associated tumor suppressor, transcript variant X4
98. GLRX3 ENSGALG00000010464 22578 0.768 - - - - - - 0.768 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
99. TDP2 ENSGALG00000013637 6595 0.768 - - - - - - - 0.768 - - tyrosyl-DNA phosphodiesterase 2 [Source:NCBI gene;Acc:421007]
100. TBP ENSGALG00000011171 5759 0.767 - - - - - - - 0.767 - - TATA-box binding protein [Source:NCBI gene;Acc:395995]

There are 304 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA