Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RPN1

Gene Name Gene ID Reads Annotation
RPN1 ENSGALG00000005907 25315 ribophorin I [Source:HGNC Symbol;Acc:HGNC:10381]











Genes with expression patterns similar to RPN1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RPN1 ENSGALG00000005907 25315 9 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribophorin I [Source:HGNC Symbol;Acc:HGNC:10381]
2. ATP5A1 ATP5A1 32367 1.727 - - - - - - 0.969 0.758 - -
3. GNL2 ENSGALG00000001973 10148 0.996 - - - - - - 0.996 - - - G protein nucleolar 2 [Source:HGNC Symbol;Acc:HGNC:29925]
4. DNAJC8 ENSGALG00000000790 19405 0.996 - - - - - - 0.996 - - - DnaJ heat shock protein family (Hsp40) member C8 [Source:HGNC Symbol;Acc:HGNC:15470]
5. MTFR1 ENSGALG00000038385 9419 0.995 - - - - - - 0.995 - - - mitochondrial fission regulator 1 [Source:NCBI gene;Acc:395222]
6. NOLC1 ENSGALG00000041124 12765 0.995 - - - - - - 0.995 - - - nucleolar and coiled-body phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:15608]
7. PSMC1 ENSGALG00000010675 20633 0.995 - - - - - - 0.995 - - - proteasome 26S subunit, ATPase 1 [Source:NCBI gene;Acc:395804]
8. EIF6 ENSGALG00000033993 14647 0.994 - - - - - - 0.994 - - - eukaryotic translation initiation factor 6 [Source:NCBI gene;Acc:419140]
9. PCDH18 ENSGALG00000009732 6634 0.994 - - - - - - 0.994 - - - protocadherin 18 [Source:HGNC Symbol;Acc:HGNC:14268]
10. MRPL35 ENSGALG00000022950 26070 0.994 - - - - - - 0.994 - - - mitochondrial ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:14489]
11. ZNF326 ENSGALG00000006113 15141 0.994 - - - - - - 0.994 - - - zinc finger protein 326 [Source:NCBI gene;Acc:424512]
12. NPEPL1 ENSGALG00000007533 5908 0.994 - - - - - - 0.994 - - - aminopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:16244]
13. SLC25A4 ENSGALG00000010614 9970 0.993 - - - - - - 0.993 - - - solute carrier family 25 member 4 [Source:NCBI gene;Acc:422546]
14. C9orf78 ENSGALG00000004152 7140 0.993 - - - - - - 0.993 - - - chromosome 9 open reading frame 78 [Source:HGNC Symbol;Acc:HGNC:24932]
15. SAT1 ENSGALG00000016348 8469 0.993 - - - - - - 0.993 - - - spermidine/spermine N1-acetyltransferase 1 [Source:NCBI gene;Acc:374006]
16. C20H20ORF24 ENSGALG00000001054 22026 0.992 - - - - - - 0.992 - - - chromosome 20 open reading frame, human C20orf24 [Source:NCBI gene;Acc:768550]
17. OTUD6B ENSGALG00000041337 15657 0.992 - - - - - - 0.992 - - - OTU domain containing 6B [Source:NCBI gene;Acc:420222]
18. BLZF1 ENSGALG00000015225 3594 0.992 - - - - - - 0.992 - - - basic leucine zipper nuclear factor 1 [Source:HGNC Symbol;Acc:HGNC:1065]
19. E2F1 ENSGALG00000003045 5604 0.992 - - - - - - 0.992 - - - E2F transcription factor 1 [Source:NCBI gene;Acc:396142]
20. ACAD11 ENSGALG00000035949 5483 0.992 - - - - - - 0.992 - - - acyl-CoA dehydrogenase family member 11 [Source:NCBI gene;Acc:420689]
21. CD2AP ENSGALG00000016720 8852 0.992 - - - - - - 0.992 - - - Gallus gallus CD2 associated protein (CD2AP), mRNA. [Source:RefSeq mRNA;Acc:NM_001318403]
22. NCBP1 ENSGALG00000002087 8907 0.992 - - - - - - 0.992 - - - nuclear cap binding protein subunit 1 [Source:NCBI gene;Acc:427379]
23. ENPP2 ENSGALG00000032746 6086 0.991 - - - - - - 0.991 - - - ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:NCBI gene;Acc:420361]
24. IDH2 ENSGALG00000034434 18307 0.991 - - - - - - 0.991 - - - isocitrate dehydrogenase (NADP(+)) 2, mitochondrial [Source:NCBI gene;Acc:431056]
25. ITPK1 ENSGALG00000034898 4212 0.991 - - - - - - 0.991 - - - inositol-tetrakisphosphate 1-kinase [Source:NCBI gene;Acc:423421]
26. MED18 ENSGALG00000028149 2684 0.991 - - - - - - 0.991 - - - mediator complex subunit 18 [Source:HGNC Symbol;Acc:HGNC:25944]
27. EIF2AK1 ENSGALG00000003391 3381 0.991 - - - - - - 0.991 - - - eukaryotic translation initiation factor 2 alpha kinase 1 [Source:NCBI gene;Acc:395360]
28. MAD2L1BP ENSGALG00000027871 7835 0.991 - - - - - - 0.991 - - - MAD2L1 binding protein [Source:HGNC Symbol;Acc:HGNC:21059]
29. SNX27 ENSGALG00000040687 3221 0.991 - - - - - - 0.991 - - - sorting nexin family member 27 [Source:NCBI gene;Acc:425666]
30. CMIP ENSGALG00000038494 5016 0.99 - - - - - - 0.990 - - - c-Maf inducing protein [Source:HGNC Symbol;Acc:HGNC:24319]
31. KBTBD4 ENSGALG00000008089 1799 0.99 - - - - - - 0.990 - - - kelch repeat and BTB domain containing 4 [Source:NCBI gene;Acc:423180]
32. FURIN ENSGALG00000008341 2609 0.99 - - - - - - 0.990 - - - furin, paired basic amino acid cleaving enzyme [Source:NCBI gene;Acc:395457]
33. TASP1 ENSGALG00000009057 1295 0.99 - - - - - - 0.990 - - - taspase 1 [Source:NCBI gene;Acc:416741]
34. PRDM15 ENSGALG00000019178 2729 0.989 - - - - - - 0.989 - - - PR/SET domain 15 [Source:HGNC Symbol;Acc:HGNC:13999]
35. ENSGALG00000029084 ENSGALG00000029084 890 0.989 - - - - - - 0.989 - - -
36. TET3 ENSGALG00000037860 3129 0.989 - - - - - - 0.989 - - - tet methylcytosine dioxygenase 3 [Source:HGNC Symbol;Acc:HGNC:28313]
37. ING4 ENSGALG00000014457 5561 0.989 - - - - - - 0.989 - - - inhibitor of growth family member 4 [Source:NCBI gene;Acc:418281]
38. GATC ENSGALG00000007195 8610 0.989 - - - - - - 0.989 - - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
39. AP3D1 ENSGALG00000000996 16143 0.988 - - - - - - 0.988 - - - adaptor related protein complex 3 delta 1 subunit, transcript variant X2
40. LRWD1 ENSGALG00000001852 13862 0.987 - - - - - - 0.987 - - - leucine rich repeats and WD repeat domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21769]
41. CSNK1D ENSGALG00000002719 19530 0.987 - - - - - - 0.987 - - - casein kinase 1 delta [Source:NCBI gene;Acc:417378]
42. XPO5 ENSGALG00000010341 24765 0.981 - - - - - - 0.981 - - - exportin 5 [Source:NCBI gene;Acc:421450]
43. PPA2 ENSGALG00000010582 22301 0.967 - - - - - - 0.967 - - - pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
44. C13H5ORF15 C13H5ORF15 11559 0.956 - - - - - - 0.956 - - -
45. DYL1 ENSGALG00000007153 94287 0.928 - - - - - - 0.928 - - - dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
46. EMC2 ENSGALG00000040325 16227 0.924 - - - - - - 0.924 - - - ER membrane protein complex subunit 2 [Source:NCBI gene;Acc:420273]
47. RPL9 ENSGALG00000000150 81866 0.911 - - - - - - 0.911 - - - ribosomal protein L9 [Source:NCBI gene;Acc:425468]
48. PTTG1 17936 0.889 - - - - - - - 0.889 - - pituitary tumor-transforming 1, transcript variant X1
49. SHFM1 SHFM1 51606 0.883 - - - - - - 0.883 - - -
50. UBR4 ENSGALG00000030563 5225 0.88 - - - - - - - 0.880 - - ubiquitin protein ligase E3 component n-recognin 4 [Source:HGNC Symbol;Acc:HGNC:30313]
51. MDH1 ENSGALG00000008858 44636 0.874 - - - - - - 0.874 - - - malate dehydrogenase 1 [Source:NCBI gene;Acc:421281]
52. RPS2 ENSGALG00000005490 293634 0.871 - - - - - - 0.871 - - - ribosomal protein S2 [Source:NCBI gene;Acc:416544]
53. TCF12 ENSGALG00000004304 63081 0.867 - - - - - - 0.867 - - - transcription factor 12 [Source:NCBI gene;Acc:396334]
54. CAP1 ENSGALG00000036294 18598 0.867 - - - - - - - 0.867 - - cyclase associated actin cytoskeleton regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:20040]
55. NSMCE2 ENSGALG00000043439 5658 0.865 - - - - - - - 0.865 - - NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase [Source:NCBI gene;Acc:420333]
56. ZSWIM7 ENSGALG00000023686 6459 0.861 - - - - - - - 0.861 - - zinc finger SWIM-type containing 7 [Source:NCBI gene;Acc:417596]
57. GNB1 ENSGALG00000001334 52398 0.857 - - - - - - 0.857 - - - G protein subunit beta 1 [Source:NCBI gene;Acc:419402]
58. XRN1 ENSGALG00000002706 4014 0.856 - - - - - - - 0.856 - - 5'-3' exoribonuclease 1 [Source:HGNC Symbol;Acc:HGNC:30654]
59. PPID ENSGALG00000009451 7529 0.851 - - - - - - - 0.851 - - peptidylprolyl isomerase D [Source:HGNC Symbol;Acc:HGNC:9257]
60. GPALPP1 ENSGALG00000031567 4221 0.846 - - - - - - - 0.846 - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
61. GTPBP4 ENSGALG00000006703 16183 0.844 - - - - - - - 0.844 - - GTP binding protein 4 [Source:NCBI gene;Acc:420458]
62. RNF185 ENSGALG00000006960 5428 0.843 - - - - - - - 0.843 - - ring finger protein 185 [Source:NCBI gene;Acc:416965]
63. C9orf64 ENSGALG00000012589 6097 0.841 - - - - - - - 0.841 - - chromosome 9 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:28144]
64. MYEF2 ENSGALG00000032546 7436 0.84 - - - - - - - 0.840 - - myelin expression factor 2 [Source:NCBI gene;Acc:415432]
65. PHLDB2 ENSGALG00000015377 8560 0.84 - - - - - - - 0.840 - - pleckstrin homology like domain family B member 2 [Source:HGNC Symbol;Acc:HGNC:29573]
66. LEPROT ENSGALG00000011047 7132 0.839 - - - - - - - 0.839 - - leptin receptor overlapping transcript [Source:NCBI gene;Acc:424699]
67. TOR1AIP1 ENSGALG00000029238 5843 0.835 - - - - - - - 0.835 - - torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
68. ARID2 ENSGALG00000033074 3461 0.834 - - - - - - - 0.834 - - AT-rich interaction domain 2 [Source:HGNC Symbol;Acc:HGNC:18037]
69. BET1L ENSGALG00000004172 5305 0.834 - - - - - - - 0.834 - - Bet1 golgi vesicular membrane trafficking protein like [Source:NCBI gene;Acc:422985]
70. MCM4 ENSGALG00000012915 13151 0.832 - - - - - - - 0.832 - - minichromosome maintenance complex component 4
71. CREPT CREPT 17142 0.827 - - - - - - - 0.827 - -
72. FTH FTH 121430 0.827 - - - - - - 0.827 - - -
73. UBE2H ENSGALG00000031975 12964 0.827 - - - - - - - 0.827 - - ubiquitin conjugating enzyme E2 H [Source:NCBI gene;Acc:416678]
74. UTP3 ENSGALG00000011553 8814 0.825 - - - - - - - 0.825 - - UTP3, small subunit processome component homolog (S. cerevisiae)
75. RNH1 ENSGALG00000006904 14542 0.816 - - - - - - - 0.816 - - ribonuclease/angiogenin inhibitor 1 [Source:NCBI gene;Acc:423111]
76. CRTAP ENSGALG00000034163 6453 0.816 - - - - - - - 0.816 - - cartilage associated protein [Source:NCBI gene;Acc:395992]
77. TRAPPC3 ENSGALG00000002284 23302 0.816 - - - - - - - 0.816 - - trafficking protein particle complex 3 [Source:NCBI gene;Acc:419625]
78. SEC63 ENSGALG00000015308 11596 0.814 - - - - - - - 0.814 - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
79. RAB12 ENSGALG00000033608 14160 0.813 - - - - - - - 0.813 - - RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
80. SIRT1 ENSGALG00000002761 9028 0.813 - - - - - - - 0.813 - - sirtuin 1 [Source:NCBI gene;Acc:423646]
81. PDDC1 5179 0.81 - - - - - - - 0.810 - - Parkinson disease 7 domain containing 1, transcript variant X6
82. GNG12 ENSGALG00000026591 5817 0.808 - - - - - - - 0.808 - - G protein subunit gamma 12, transcript variant X21
83. FBXO7 ENSGALG00000012569 4124 0.808 - - - - - - - 0.808 - - F-box protein 7 [Source:NCBI gene;Acc:418063]
84. CDC27 ENSGALG00000000596 12014 0.806 - - - - - - - 0.806 - - cell division cycle 27 [Source:NCBI gene;Acc:419960]
85. PDLIM5 ENSGALG00000012211 3064 0.806 - - - - - - - 0.806 - - PDZ and LIM domain 5 [Source:NCBI gene;Acc:422699]
86. Sep-06 Sep-06 5961 0.805 - - - - - - - 0.805 - -
87. PLEKHH2 ENSGALG00000009947 6384 0.804 - - - - - - - 0.804 - - pleckstrin homology, MyTH4 and FERM domain containing H2 [Source:HGNC Symbol;Acc:HGNC:30506]
88. PLOD1 ENSGALG00000004531 8256 0.804 - - - - - - - 0.804 - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 [Source:NCBI gene;Acc:419485]
89. COL4A1 ENSGALG00000036798 12749 0.803 - - - - - - - 0.803 - - collagen type IV alpha 1 chain [Source:NCBI gene;Acc:395530]
90. ASNSD1 ENSGALG00000041666 3757 0.803 - - - - - - - 0.803 - - asparagine synthetase domain containing 1 [Source:NCBI gene;Acc:423983]
91. IRAK1BP1 ENSGALG00000015892 2236 0.799 - - - - - - - 0.799 - - interleukin 1 receptor associated kinase 1 binding protein 1 [Source:NCBI gene;Acc:421857]
92. USP34 ENSGALG00000004455 6667 0.798 - - - - - - - 0.798 - - ubiquitin specific peptidase 34 [Source:NCBI gene;Acc:421193]
93. PARN ENSGALG00000003091 6363 0.798 - - - - - - - 0.798 - - poly(A)-specific ribonuclease [Source:NCBI gene;Acc:416423]
94. RBM12B ENSGALG00000035129 4314 0.797 - - - - - - - 0.797 - - RNA binding motif protein 12B [Source:NCBI gene;Acc:420223]
95. CKLF ENSGALG00000005254 3365 0.796 - - - - - - - 0.796 - - chemokine like factor [Source:HGNC Symbol;Acc:HGNC:13253]
96. PDE3B ENSGALG00000006035 3732 0.795 - - - - - - - 0.795 - - phosphodiesterase 3B [Source:NCBI gene;Acc:423064]
97. RER1 ENSGALG00000021683 9074 0.795 - - - - - - - 0.795 - - retention in endoplasmic reticulum sorting receptor 1 [Source:NCBI gene;Acc:419397]
98. CCDC53 CCDC53 3732 0.794 - - - - - - - 0.794 - -
99. ATP6V0A2 ENSGALG00000003194 4824 0.792 - - - - - - - 0.792 - - ATPase H+ transporting V0 subunit a2 [Source:NCBI gene;Acc:395473]
100. CLMP ENSGALG00000006507 8079 0.79 - - - - - - - 0.790 - - CXADR like membrane protein [Source:HGNC Symbol;Acc:HGNC:24039]

There are 78 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA