Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RPL9

Gene Name Gene ID Reads Annotation
RPL9 ENSGALG00000000150 81866 ribosomal protein L9 [Source:NCBI gene;Acc:425468]











Genes with expression patterns similar to RPL9

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RPL9 ENSGALG00000000150 81866 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein L9 [Source:NCBI gene;Acc:425468]
2. PRDM15 ENSGALG00000019178 2729 1.629 - - - - - - 0.882 - 0.747 - PR/SET domain 15 [Source:HGNC Symbol;Acc:HGNC:13999]
3. DYL1 ENSGALG00000007153 94287 0.972 - - - - - - 0.972 - - - dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
4. SHFM1 SHFM1 51606 0.96 - - - - - - 0.960 - - -
5. PPA2 ENSGALG00000010582 22301 0.943 - - - - - - 0.943 - - - pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
6. ATP5A1 ATP5A1 32367 0.939 - - - - - - 0.939 - - -
7. GNB1 ENSGALG00000001334 52398 0.932 - - - - - - 0.932 - - - G protein subunit beta 1 [Source:NCBI gene;Acc:419402]
8. XPO5 ENSGALG00000010341 24765 0.929 - - - - - - 0.929 - - - exportin 5 [Source:NCBI gene;Acc:421450]
9. LRWD1 ENSGALG00000001852 13862 0.921 - - - - - - 0.921 - - - leucine rich repeats and WD repeat domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21769]
10. OTUD6B ENSGALG00000041337 15657 0.917 - - - - - - 0.917 - - - OTU domain containing 6B [Source:NCBI gene;Acc:420222]
11. RPS2 ENSGALG00000005490 293634 0.915 - - - - - - 0.915 - - - ribosomal protein S2 [Source:NCBI gene;Acc:416544]
12. CSNK1D ENSGALG00000002719 19530 0.914 - - - - - - 0.914 - - - casein kinase 1 delta [Source:NCBI gene;Acc:417378]
13. C20H20ORF24 ENSGALG00000001054 22026 0.912 - - - - - - 0.912 - - - chromosome 20 open reading frame, human C20orf24 [Source:NCBI gene;Acc:768550]
14. PSMC1 ENSGALG00000010675 20633 0.912 - - - - - - 0.912 - - - proteasome 26S subunit, ATPase 1 [Source:NCBI gene;Acc:395804]
15. RPN1 ENSGALG00000005907 25315 0.911 - - - - - - 0.911 - - - ribophorin I [Source:HGNC Symbol;Acc:HGNC:10381]
16. MDH1 ENSGALG00000008858 44636 0.911 - - - - - - 0.911 - - - malate dehydrogenase 1 [Source:NCBI gene;Acc:421281]
17. EMC2 ENSGALG00000040325 16227 0.911 - - - - - - 0.911 - - - ER membrane protein complex subunit 2 [Source:NCBI gene;Acc:420273]
18. DNAJC8 ENSGALG00000000790 19405 0.909 - - - - - - 0.909 - - - DnaJ heat shock protein family (Hsp40) member C8 [Source:HGNC Symbol;Acc:HGNC:15470]
19. MRPL35 ENSGALG00000022950 26070 0.909 - - - - - - 0.909 - - - mitochondrial ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:14489]
20. SLC25A4 ENSGALG00000010614 9970 0.906 - - - - - - 0.906 - - - solute carrier family 25 member 4 [Source:NCBI gene;Acc:422546]
21. NCBP1 ENSGALG00000002087 8907 0.906 - - - - - - 0.906 - - - nuclear cap binding protein subunit 1 [Source:NCBI gene;Acc:427379]
22. EIF6 ENSGALG00000033993 14647 0.904 - - - - - - 0.904 - - - eukaryotic translation initiation factor 6 [Source:NCBI gene;Acc:419140]
23. ZNF326 ENSGALG00000006113 15141 0.902 - - - - - - 0.902 - - - zinc finger protein 326 [Source:NCBI gene;Acc:424512]
24. CD2AP ENSGALG00000016720 8852 0.901 - - - - - - 0.901 - - - Gallus gallus CD2 associated protein (CD2AP), mRNA. [Source:RefSeq mRNA;Acc:NM_001318403]
25. MTFR1 ENSGALG00000038385 9419 0.9 - - - - - - 0.900 - - - mitochondrial fission regulator 1 [Source:NCBI gene;Acc:395222]
26. PCDH18 ENSGALG00000009732 6634 0.899 - - - - - - 0.899 - - - protocadherin 18 [Source:HGNC Symbol;Acc:HGNC:14268]
27. NOLC1 ENSGALG00000041124 12765 0.898 - - - - - - 0.898 - - - nucleolar and coiled-body phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:15608]
28. GATC ENSGALG00000007195 8610 0.898 - - - - - - 0.898 - - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
29. AP3D1 ENSGALG00000000996 16143 0.898 - - - - - - 0.898 - - - adaptor related protein complex 3 delta 1 subunit, transcript variant X2
30. SAT1 ENSGALG00000016348 8469 0.896 - - - - - - 0.896 - - - spermidine/spermine N1-acetyltransferase 1 [Source:NCBI gene;Acc:374006]
31. ENPP2 ENSGALG00000032746 6086 0.895 - - - - - - 0.895 - - - ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:NCBI gene;Acc:420361]
32. NPEPL1 ENSGALG00000007533 5908 0.894 - - - - - - 0.894 - - - aminopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:16244]
33. GNL2 ENSGALG00000001973 10148 0.894 - - - - - - 0.894 - - - G protein nucleolar 2 [Source:HGNC Symbol;Acc:HGNC:29925]
34. C13H5ORF15 C13H5ORF15 11559 0.893 - - - - - - 0.893 - - -
35. C9orf78 ENSGALG00000004152 7140 0.892 - - - - - - 0.892 - - - chromosome 9 open reading frame 78 [Source:HGNC Symbol;Acc:HGNC:24932]
36. CMIP ENSGALG00000038494 5016 0.891 - - - - - - 0.891 - - - c-Maf inducing protein [Source:HGNC Symbol;Acc:HGNC:24319]
37. E2F1 ENSGALG00000003045 5604 0.89 - - - - - - 0.890 - - - E2F transcription factor 1 [Source:NCBI gene;Acc:396142]
38. BLZF1 ENSGALG00000015225 3594 0.889 - - - - - - 0.889 - - - basic leucine zipper nuclear factor 1 [Source:HGNC Symbol;Acc:HGNC:1065]
39. EIF2AK1 ENSGALG00000003391 3381 0.889 - - - - - - 0.889 - - - eukaryotic translation initiation factor 2 alpha kinase 1 [Source:NCBI gene;Acc:395360]
40. ING4 ENSGALG00000014457 5561 0.889 - - - - - - 0.889 - - - inhibitor of growth family member 4 [Source:NCBI gene;Acc:418281]
41. MED18 ENSGALG00000028149 2684 0.888 - - - - - - 0.888 - - - mediator complex subunit 18 [Source:HGNC Symbol;Acc:HGNC:25944]
42. MAD2L1BP ENSGALG00000027871 7835 0.888 - - - - - - 0.888 - - - MAD2L1 binding protein [Source:HGNC Symbol;Acc:HGNC:21059]
43. ACAD11 ENSGALG00000035949 5483 0.887 - - - - - - 0.887 - - - acyl-CoA dehydrogenase family member 11 [Source:NCBI gene;Acc:420689]
44. ITPK1 ENSGALG00000034898 4212 0.887 - - - - - - 0.887 - - - inositol-tetrakisphosphate 1-kinase [Source:NCBI gene;Acc:423421]
45. SNX27 ENSGALG00000040687 3221 0.887 - - - - - - 0.887 - - - sorting nexin family member 27 [Source:NCBI gene;Acc:425666]
46. IDH2 ENSGALG00000034434 18307 0.886 - - - - - - 0.886 - - - isocitrate dehydrogenase (NADP(+)) 2, mitochondrial [Source:NCBI gene;Acc:431056]
47. FURIN ENSGALG00000008341 2609 0.885 - - - - - - 0.885 - - - furin, paired basic amino acid cleaving enzyme [Source:NCBI gene;Acc:395457]
48. TASP1 ENSGALG00000009057 1295 0.884 - - - - - - 0.884 - - - taspase 1 [Source:NCBI gene;Acc:416741]
49. KBTBD4 ENSGALG00000008089 1799 0.882 - - - - - - 0.882 - - - kelch repeat and BTB domain containing 4 [Source:NCBI gene;Acc:423180]
50. ENSGALG00000029084 ENSGALG00000029084 890 0.882 - - - - - - 0.882 - - -
51. TET3 ENSGALG00000037860 3129 0.882 - - - - - - 0.882 - - - tet methylcytosine dioxygenase 3 [Source:HGNC Symbol;Acc:HGNC:28313]
52. TCF12 ENSGALG00000004304 63081 0.847 - - - - - - 0.847 - - - transcription factor 12 [Source:NCBI gene;Acc:396334]
53. FAM47E-STBD1 FAM47E-STBD1 1148 0.789 - - - - - - - - 0.789 -
54. NPM1 ENSGALG00000002197 24109 0.765 - - 0.765 - - - - - - - nucleophosmin [Source:NCBI gene;Acc:396203]
55. FTH FTH 121430 0.762 - - - - - - 0.762 - - -
56. CYP2R1 ENSGALG00000006050 1521 0.761 - - - - - - - - 0.761 - cytochrome P450 family 2 subfamily R member 1 [Source:HGNC Symbol;Acc:HGNC:20580]
57. SBNO1 ENSGALG00000003392 6731 0.761 - - 0.761 - - - - - - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
58. DYNLT1 ENSGALG00000019979 38176 0.758 - - - - 0.758 - - - - - dynein light chain Tctex-type 1 [Source:HGNC Symbol;Acc:HGNC:11697]
59. EIF4EBP1 ENSGALG00000003205 89048 0.754 - - - - 0.754 - - - - - eukaryotic translation initiation factor 4E binding protein 1 [Source:HGNC Symbol;Acc:HGNC:3288]
60. ERBB2 ENSGALG00000031529 313 0.749 - - - - - - - - 0.749 - erb-b2 receptor tyrosine kinase 2 [Source:NCBI gene;Acc:426130]
61. TOM1L2 ENSGALG00000004902 89 0.748 - - - - - - - - 0.748 - target of myb1 like 2 membrane trafficking protein [Source:NCBI gene;Acc:416509]
62. USP8 ENSGALG00000005894 4499 0.748 - - 0.748 - - - - - - - ubiquitin specific peptidase 8 [Source:HGNC Symbol;Acc:HGNC:12631]
63. CEP112 ENSGALG00000034989 123 0.747 - - - - - - - - 0.747 - centrosomal protein 112 [Source:NCBI gene;Acc:101749632]
64. PSMB7 ENSGALG00000001103 42683 0.747 - - - - 0.747 - - - - - proteasome subunit beta 7 [Source:NCBI gene;Acc:378915]
65. FLRT3 ENSGALG00000008716 593 0.747 - - - - - - - - 0.747 - fibronectin leucine rich transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:3762]
66. SFPQ ENSGALG00000002514 66832 0.747 - - - - 0.747 - - - - - splicing factor proline and glutamine rich [Source:HGNC Symbol;Acc:HGNC:10774]
67. NEMF ENSGALG00000012263 2250 0.747 - - 0.747 - - - - - - - nuclear export mediator factor [Source:NCBI gene;Acc:428926]
68. MIB1 ENSGALG00000014974 3583 0.74 - - - - - - - - 0.740 - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
69. L3HYPDH ENSGALG00000012011 2212 0.739 - - - - - - - - 0.739 - trans-L-3-hydroxyproline dehydratase [Source:HGNC Symbol;Acc:HGNC:20488]
70. DCP1B 1306 0.737 - - - - - - - - 0.737 - decapping mRNA 1B
71. TSC22D1 ENSGALG00000016971 6062 0.736 - - 0.736 - - - - - - - TSC22 domain family member 1 [Source:NCBI gene;Acc:396005]
72. AACS ENSGALG00000002899 960 0.734 - - - - - - - - 0.734 - acetoacetyl-CoA synthetase [Source:NCBI gene;Acc:416811]
73. FECH ENSGALG00000038461 3491 0.734 - - 0.734 - - - - - - - ferrochelatase [Source:NCBI gene;Acc:374020]
74. MSANTD4 ENSGALG00000017177 3306 0.732 - - - - - - - - 0.732 - Myb/SANT DNA binding domain containing 4 with coiled-coils [Source:HGNC Symbol;Acc:HGNC:29383]
75. TBC1D2 ENSGALG00000001944 717 0.732 - - - - - - - - 0.732 - TBC1 domain family member 2 [Source:HGNC Symbol;Acc:HGNC:18026]
76. EIF5 ENSGALG00000011464 62584 0.73 - - - - 0.730 - - - - - eukaryotic translation initiation factor 5 [Source:NCBI gene;Acc:423479]
77. SSB ENSGALG00000009677 25335 0.73 - - 0.730 - - - - - - - Sjogren syndrome antigen B [Source:NCBI gene;Acc:395268]
78. RPS3 ENSGALG00000017330 212566 0.73 - - - - - - - - 0.730 - ribosomal protein S3 [Source:NCBI gene;Acc:419069]
79. PARP3 ENSGALG00000004517 331 0.73 - - - - - - - - 0.730 - poly(ADP-ribose) polymerase family member 3 [Source:HGNC Symbol;Acc:HGNC:273]
80. RBBP8 ENSGALG00000014982 3255 0.729 - - - - - - - - 0.729 - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
81. ZNF207 ENSGALG00000003454 47086 0.726 - - - - 0.726 - - - - - zinc finger protein 207 [Source:HGNC Symbol;Acc:HGNC:12998]
82. FAM122A ENSGALG00000006127 9630 0.726 - - - - - - - - 0.726 - family with sequence similarity 122A [Source:NCBI gene;Acc:422237]
83. EIF3F ENSGALG00000005326 76059 0.725 - - - - 0.725 - - - - - eukaryotic translation initiation factor 3 subunit F
84. TOP2A ENSGALG00000003922 7726 0.725 - - 0.725 - - - - - - - topoisomerase (DNA) II alpha [Source:NCBI gene;Acc:395570]
85. ARID2 ENSGALG00000033074 3461 0.724 - - 0.724 - - - - - - - AT-rich interaction domain 2 [Source:HGNC Symbol;Acc:HGNC:18037]
86. BBS2 ENSGALG00000042415 1816 0.724 - - - - - - - - 0.724 - Bardet-Biedl syndrome 2 [Source:NCBI gene;Acc:415694]
87. PUM2 ENSGALG00000016481 23625 0.723 - - - - 0.723 - - - - - pumilio RNA binding family member 2 [Source:NCBI gene;Acc:421961]
88. GALM ENSGALG00000013828 1546 0.722 - - - - - - - - 0.722 - galactose mutarotase [Source:HGNC Symbol;Acc:HGNC:24063]
89. NUPL2 ENSGALG00000010942 2442 0.72 - - - - - - - - 0.720 - nucleoporin like 2 [Source:NCBI gene;Acc:420614]
90. CEP250 ENSGALG00000026151 163 0.72 - - - - - - - - 0.720 - centrosomal protein 250 [Source:HGNC Symbol;Acc:HGNC:1859]
91. PHC3 ENSGALG00000009372 157 0.718 - - - - - - - - 0.718 - polyhomeotic homolog 3, transcript variant X8
92. ENSGALG00000026919 ENSGALG00000026919 301 0.717 - - - - - - - - 0.717 -
93. SPATA5L1 ENSGALG00000005682 240 0.715 - - - - - - - - 0.715 - spermatogenesis associated 5 like 1 [Source:HGNC Symbol;Acc:HGNC:28762]
94. TRAF3IP1 ENSGALG00000004236 7094 0.714 - - 0.714 - - - - - - - TRAF3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:17861]
95. GCC2 ENSGALG00000016806 1085 0.714 - - 0.714 - - - - - - - GRIP and coiled-coil domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23218]
96. ATRX ENSGALG00000007843 34172 0.713 - - 0.713 - - - - - - - ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
97. TPM4 ENSGALG00000002563 15621 0.713 - - 0.713 - - - - - - - tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
98. ENSGALG00000019793 ENSGALG00000019793 198 0.712 - - - - - - - - 0.712 -
99. BRAP ENSGALG00000004650 555 0.712 - - - - - - - - 0.712 - BRCA1 associated protein [Source:NCBI gene;Acc:772041]
100. LRP12 ENSGALG00000033630 2534 0.712 - - - - - - - - 0.712 - LDL receptor related protein 12 [Source:HGNC Symbol;Acc:HGNC:31708]

There are 23 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA