Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RPL39

Gene Name Gene ID Reads Annotation
RPL39 ENSGALG00000008620 63315 ribosomal protein L39 [Source:NCBI gene;Acc:374132]











Genes with expression patterns similar to RPL39

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RPL39 ENSGALG00000008620 63315 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein L39 [Source:NCBI gene;Acc:374132]
2. RPS15A ENSGALG00000006771 287037 1.563 - - - - - 0.791 0.772 - - - ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
3. KIF2A ENSGALG00000014737 16391 0.989 - - - - - - 0.989 - - - kinesin heavy chain member 2A [Source:NCBI gene;Acc:427156]
4. AURKAIP1 ENSGALG00000001555 14715 0.989 - - - - - - 0.989 - - - aurora kinase A interacting protein 1 [Source:NCBI gene;Acc:419415]
5. CWC15 ENSGALG00000017207 30922 0.989 - - - - - - 0.989 - - - CWC15 spliceosome associated protein homolog [Source:NCBI gene;Acc:418996]
6. MTX2 ENSGALG00000009264 17304 0.987 - - - - - - 0.987 - - - metaxin 2 [Source:HGNC Symbol;Acc:HGNC:7506]
7. EEF1E1 ENSGALG00000012781 22615 0.987 - - - - - - 0.987 - - - eukaryotic translation elongation factor 1 epsilon 1
8. DHX36 ENSGALG00000043082 17619 0.986 - - - - - - 0.986 - - - DEAH-box helicase 36 [Source:HGNC Symbol;Acc:HGNC:14410]
9. UBE2C ENSGALG00000026380 27639 0.986 - - - - - - 0.986 - - - ubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]
10. ARCN1 ENSGALG00000007430 21499 0.985 - - - - - - 0.985 - - - archain 1 [Source:NCBI gene;Acc:770561]
11. PSMA7 ENSGALG00000030411 42436 0.985 - - - - - - 0.985 - - - proteasome subunit alpha 7 [Source:NCBI gene;Acc:395318]
12. DYNLRB1 ENSGALG00000034509 28361 0.985 - - - - - - 0.985 - - - dynein light chain roadblock-type 1
13. ATF4 ENSGALG00000012135 53361 0.985 - - - - - - 0.985 - - - activating transcription factor 4 [Source:NCBI gene;Acc:395693]
14. ENSGALG00000021694 ENSGALG00000021694 26011 0.985 - - - - - - 0.985 - - -
15. C1H21ORF33 ENSGALG00000019171 8910 0.984 - - - - - - 0.984 - - - chromosome 1 open reading frame, human C21orf33 [Source:NCBI gene;Acc:418552]
16. MRPS27 ENSGALG00000015002 6541 0.984 - - - - - - 0.984 - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
17. NAP1L4 ENSGALG00000006446 10868 0.984 - - - - - - 0.984 - - - nucleosome assembly protein 1 like 4 [Source:NCBI gene;Acc:423087]
18. THBS4 ENSGALG00000014804 4228 0.983 - - - - - - 0.983 - - - Gallus gallus thrombospondin 4 (THBS4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321549]
19. PRRX1 ENSGALG00000003324 4859 0.983 - - - - - - 0.983 - - - paired related homeobox 1 [Source:NCBI gene;Acc:373941]
20. MAPKAPK2 ENSGALG00000000883 6174 0.983 - - - - - - 0.983 - - - mitogen-activated protein kinase-activated protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:6887]
21. TDP2 ENSGALG00000013637 6595 0.983 - - - - - - 0.983 - - - tyrosyl-DNA phosphodiesterase 2 [Source:NCBI gene;Acc:421007]
22. HSPA14 ENSGALG00000035201 7372 0.983 - - - - - - 0.983 - - - heat shock protein family A (Hsp70) member 14
23. DNMT3B ENSGALG00000041461 12959 0.983 - - - - - - 0.983 - - - DNA methyltransferase 3 beta [Source:NCBI gene;Acc:419287]
24. ENSGALG00000001861 ENSGALG00000001861 10150 0.982 - - - - - - 0.982 - - -
25. AP2M1 ENSGALG00000008432 16249 0.982 - - - - - - 0.982 - - - adaptor related protein complex 2 mu 1 subunit [Source:NCBI gene;Acc:770246]
26. TUSC3 ENSGALG00000013674 2848 0.982 - - - - - - 0.982 - - - tumor suppressor candidate 3 [Source:HGNC Symbol;Acc:HGNC:30242]
27. KIAA0922 4430 0.982 - - - - - - 0.982 - - - KIAA0922, transcript variant X4
28. UTP14A ENSGALG00000024039 8532 0.982 - - - - - - 0.982 - - - UTP14A small subunit processome component
29. ECE-1 ECE-1 3057 0.982 - - - - - - 0.982 - - -
30. WDYHV1 ENSGALG00000030059 2961 0.982 - - - - - - 0.982 - - - WDYHV motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25490]
31. PIK3C2B ENSGALG00000037043 4522 0.981 - - - - - - 0.981 - - - phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:HGNC Symbol;Acc:HGNC:8972]
32. RAP1GDS1 ENSGALG00000012222 10078 0.981 - - - - - - 0.981 - - - rap1 GTPase-GDP dissociation stimulator 1 [Source:NCBI gene;Acc:422701]
33. PRRC2B 1997 0.981 - - - - - - 0.981 - - - proline rich coiled-coil 2B, transcript variant X12
34. GBX-1 GBX-1 1430 0.981 - - - - - - 0.981 - - -
35. TRA2B ENSGALG00000006531 40566 0.98 - - - - - - 0.980 - - - transformer 2 beta homolog (Drosophila) [Source:NCBI gene;Acc:395403]
36. gga-mir-762 ENSGALG00000025437 24823 0.98 - - - - - - 0.980 - - - gga-mir-762 [Source:miRBase;Acc:MI0008209]
37. BRT-1 BRT-1 26083 0.976 - - - - - - 0.976 - - -
38. CHMP4B ENSGALG00000002095 17422 0.976 - - - - - - 0.976 - - - charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
39. CBX3 ENSGALG00000011038 40977 0.968 - - - - - - 0.968 - - - chromobox 3 [Source:NCBI gene;Acc:395355]
40. RPL19 ENSGALG00000001658 277294 0.921 - - - - - - 0.921 - - - ribosomal protein L19 [Source:NCBI gene;Acc:420003]
41. ANP32B ENSGALG00000037483 190705 0.9 - - - - - - 0.900 - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
42. NSA2 ENSGALG00000014942 45193 0.853 - - - - - - 0.853 - - - NSA2, ribosome biogenesis homolog [Source:NCBI gene;Acc:427206]
43. FN1 ENSGALG00000003578 37024 0.847 - - - - - - 0.847 - - - fibronectin 1 [Source:NCBI gene;Acc:396133]
44. AHCY ENSGALG00000033677 35555 0.842 - - - - - - 0.842 - - - adenosylhomocysteinase [Source:HGNC Symbol;Acc:HGNC:343]
45. NUCKS1 ENSGALG00000000708 80882 0.84 - - - - - - 0.840 - - - nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:NCBI gene;Acc:404775]
46. C1QTNF3 ENSGALG00000027887 8646 0.805 - - - - - - 0.805 - - - C1q and tumor necrosis factor related protein 3, transcript variant X1
47. YTHDF2 ENSGALG00000034831 15118 0.79 - - - - - - 0.790 - - - YTH N6-methyladenosine RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:31675]
48. SIAH1 ENSGALG00000003916 6682 0.788 - - - - - - 0.788 - - - siah E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:10857]
49. HMGN5 ENSGALG00000007131 171006 0.77 - - - - - - 0.770 - - - high mobility group nucleosome binding domain 5, transcript variant X1
50. RPL7A ENSGALG00000003197 353903 0.768 - - - - - 0.768 - - - - ribosomal protein L7a [Source:NCBI gene;Acc:417158]
51. RPS11 ENSGALG00000017299 265862 0.758 - - - - - - 0.758 - - - ribosomal protein S11 [Source:NCBI gene;Acc:419049]
52. RPL27 ENSGALG00000002837 302752 0.749 - - - - - - 0.749 - - - ribosomal protein L27 [Source:NCBI gene;Acc:396280]
53. RPS25 ENSGALG00000007699 156127 0.747 - - - - 0.747 - - - - - ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
54. RPS3 ENSGALG00000017330 212566 0.747 - - - - - 0.747 - - - - ribosomal protein S3 [Source:NCBI gene;Acc:419069]
55. NONO ENSGALG00000005507 68606 0.735 - - - - - - 0.735 - - - non-POU domain containing octamer binding [Source:NCBI gene;Acc:428701]
56. HMBS ENSGALG00000042939 13360 0.734 - - - - - - 0.734 - - - hydroxymethylbilane synthase [Source:HGNC Symbol;Acc:HGNC:4982]
57. SDC1 ENSGALG00000016480 13737 0.733 - - - - - - 0.733 - - - syndecan 1 [Source:HGNC Symbol;Acc:HGNC:10658]
58. RPL7 ENSGALG00000035252 247865 0.73 - - - - - 0.730 - - - - ribosomal protein L7 [Source:NCBI gene;Acc:420182]
59. RPS14 ENSGALG00000004588 268250 0.724 - - - - - 0.724 - - - - ribosomal protein S14 [Source:NCBI gene;Acc:416275]
60. RPL35 ENSGALG00000035677 252113 0.721 - - - - 0.721 - - - - - ribosomal protein L35 [Source:NCBI gene;Acc:374133]
61. RPL5 ENSGALG00000005922 321770 0.719 - - - - - - - - 0.719 - ribosomal protein L5 [Source:NCBI gene;Acc:395269]
62. RPS10 ENSGALG00000002813 541909 0.711 - - - - - 0.711 - - - - ribosomal protein S10 [Source:NCBI gene;Acc:419904]
63. HSPA5 ENSGALG00000001000 40342 0.707 - - - - - - 0.707 - - - heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) [Source:NCBI gene;Acc:396487]
64. ENSGALG00000002696 ENSGALG00000002696 191985 0.705 - - - - - 0.705 - - - -
65. PPA2 ENSGALG00000010582 22301 0.705 - - - - - - - - - 0.705 pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA