Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RPL35

Gene Name Gene ID Reads Annotation
RPL35 ENSGALG00000035677 252113 ribosomal protein L35 [Source:NCBI gene;Acc:374133]











Genes with expression patterns similar to RPL35

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RPL35 ENSGALG00000035677 252113 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
2. RPL7L1 ENSGALG00000011974 20292 1.587 - - - - 0.708 - 0.879 - - - ribosomal protein L7 like 1 [Source:NCBI gene;Acc:422676]
3. RBMX ENSGALG00000006457 34009 1.562 - - - - 0.773 - 0.789 - - - RNA binding motif protein X-linked [Source:NCBI gene;Acc:422248]
4. TXNDC17 ENSGALG00000027950 45004 1.557 - - - - 0.701 - 0.856 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
5. CSE1L ENSGALG00000004707 20653 1.513 - - - - 0.703 - 0.810 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
6. DKC1 ENSGALG00000005054 30350 1.511 - - - - 0.705 - 0.806 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
7. RPL13 ENSGALG00000006179 345032 1.491 0.781 0.710 - - - - - - - - ribosomal protein L13 [Source:NCBI gene;Acc:395849]
8. U2AF1 ENSGALG00000016198 45027 1.474 0.746 - 0.728 - - - - - - - U2 small nuclear RNA auxiliary factor 1 [Source:NCBI gene;Acc:395370]
9. CHST14 ENSGALG00000026531 7957 1.474 - - - - - - 0.746 0.728 - - carbohydrate sulfotransferase 14
10. ARL6IP1 ENSGALG00000006780 16471 1.467 - - - - 0.739 - 0.728 - - - ADP ribosylation factor like GTPase 6 interacting protein 1 [Source:NCBI gene;Acc:416604]
11. TCEB3 ENSGALG00000034625 184577 1.427 0.702 - - - - - - - - 0.725 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
12. RPS23 ENSGALG00000015617 430299 1.424 - - 0.714 - 0.710 - - - - - ribosomal protein S23
13. RAD21 ENSGALG00000029523 25658 0.901 - - - - - - 0.901 - - - RAD21 cohesin complex component [Source:NCBI gene;Acc:420286]
14. MCTS1 ENSGALG00000008517 27514 0.899 - - - - - - 0.899 - - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
15. MRPL54 ENSGALG00000027611 39450 0.887 - - - - - - 0.887 - - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
16. SRRM1 ENSGALG00000001283 23820 0.881 - - - - - - 0.881 - - - serine and arginine repetitive matrix 1 [Source:NCBI gene;Acc:428216]
17. FKBP12 FKBP12 64317 0.876 - - - - - - 0.876 - - -
18. GLRX3 ENSGALG00000010464 22578 0.875 - - - - - - 0.875 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
19. VBP1 VBP1 14482 0.874 - - - - - - 0.874 - - -
20. RBBP4 ENSGALG00000003522 72455 0.873 - - - - - - 0.873 - - - RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]
21. EIF2B EIF2B 28702 0.868 - - - - - - 0.868 - - -
22. KDM5B ENSGALG00000038948 50645 0.866 - - - - - - 0.866 - - - lysine demethylase 5B [Source:NCBI gene;Acc:421168]
23. UQCRC1 ENSGALG00000005789 23201 0.864 - - - - - - 0.864 - - - ubiquinol-cytochrome c reductase core protein 1 [Source:HGNC Symbol;Acc:HGNC:12585]
24. EIF4A2 ENSGALG00000008684 58507 0.863 - - - - - - 0.863 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
25. PTP4A2 ENSGALG00000003265 24826 0.862 - - - - - - 0.862 - - - protein tyrosine phosphatase type IVA, member 2 [Source:HGNC Symbol;Acc:HGNC:9635]
26. TMPO ENSGALG00000011504 14454 0.857 - - - - - - 0.857 - - - thymopoietin [Source:NCBI gene;Acc:417923]
27. RCN2 ENSGALG00000039284 17848 0.856 - - - - - - 0.856 - - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
28. SBNO1 ENSGALG00000003392 6731 0.854 - - - - - - 0.854 - - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
29. PNRC2 ENSGALG00000004122 19228 0.853 - - - - - - 0.853 - - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
30. SPCS1 ENSGALG00000001655 7718 0.853 - - - - - - 0.853 - - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
31. RPL36AL ENSGALG00000004952 205590 0.853 - - - - - - 0.853 - - - ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
32. LOC776067 ENSGALG00000016808 9164 0.852 - - - - - - 0.852 - - - E3 SUMO-protein ligase RanBP2-like, transcript variant X50
33. KDELR2 ENSGALG00000040793 29669 0.852 - - - - - - 0.852 - - - KDEL endoplasmic reticulum protein retention receptor 2 [Source:NCBI gene;Acc:771927]
34. TLK1 ENSGALG00000009569 5446 0.851 - - - - - - 0.851 - - - tousled like kinase 1 [Source:HGNC Symbol;Acc:HGNC:11841]
35. CASP3 ENSGALG00000010638 11572 0.85 - - - - - - 0.850 - - - caspase 3 [Source:NCBI gene;Acc:395476]
36. SNX4 ENSGALG00000012052 11634 0.85 - - - - - - 0.850 - - - sorting nexin 4 [Source:HGNC Symbol;Acc:HGNC:11175]
37. SIKE1 ENSGALG00000002147 20836 0.85 - - - - - - 0.850 - - - suppressor of IKBKE 1 [Source:NCBI gene;Acc:419887]
38. C1QBP ENSGALG00000001654 34814 0.849 - - - - - - 0.849 - - - complement C1q binding protein [Source:HGNC Symbol;Acc:HGNC:1243]
39. SLC25A3 ENSGALG00000011514 62606 0.848 - - - - - - 0.848 - - - solute carrier family 25 member 3 [Source:NCBI gene;Acc:417924]
40. XRN2 ENSGALG00000008372 22164 0.848 - - - - - - 0.848 - - - 5'-3' exoribonuclease 2 [Source:NCBI gene;Acc:421236]
41. RRP9 ENSGALG00000043359 9747 0.848 - - - - - - 0.848 - - - ribosomal RNA processing 9, U3 small nucleolar RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16829]
42. TPD52L2 ENSGALG00000004683 13624 0.848 - - - - - - 0.848 - - - tumor protein D52 like 2 [Source:NCBI gene;Acc:419257]
43. LSM5 ENSGALG00000041625 22307 0.846 - - - - - - 0.846 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
44. RANBP1 ENSGALG00000002107 17715 0.845 - - - - - - 0.845 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
45. PSMC3 ENSGALG00000008108 22922 0.845 - - - - - - 0.845 - - - proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
46. GSPT1 15580 0.843 - - - - - - 0.843 - - - G1 to S phase transition 1, transcript variant X1
47. CDC45 ENSGALG00000001616 8432 0.843 - - - - - - 0.843 - - - cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]
48. NUPL1 NUPL1 8197 0.843 - - - - - - 0.843 - - -
49. PPP1CC ENSGALG00000004571 14748 0.843 - - - - - - 0.843 - - - protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
50. YWHAZ ENSGALG00000031387 84985 0.842 - - - - - - 0.842 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
51. SOD1 ENSGALG00000015844 35836 0.842 - - - - - - 0.842 - - - superoxide dismutase 1, soluble [Source:NCBI gene;Acc:395938]
52. R3HDM1 ENSGALG00000012246 6580 0.84 - - - - - - 0.840 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
53. SRSF6 ENSGALG00000000990 12424 0.84 - - - - - - 0.840 - - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
54. HERC2 ENSGALG00000016739 9900 0.839 - - - - - - 0.839 - - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:418682]
55. COX7C ENSGALG00000027963 84312 0.839 - - - - - - 0.839 - - - cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
56. PARP1 ENSGALG00000009228 39433 0.839 - - - - - - 0.839 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
57. CRLS1 ENSGALG00000009214 8652 0.839 - - - - - - 0.839 - - - cardiolipin synthase 1 [Source:HGNC Symbol;Acc:HGNC:16148]
58. HADHB ENSGALG00000016555 24530 0.839 - - - - - - 0.839 - - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [Source:HGNC Symbol;Acc:HGNC:4803]
59. INCENP ENSGALG00000007537 16617 0.838 - - - - - - 0.838 - - - inner centromere protein [Source:NCBI gene;Acc:396270]
60. ARPC1A ENSGALG00000004693 11583 0.837 - - - - - - 0.837 - - - actin related protein 2/3 complex subunit 1A [Source:NCBI gene;Acc:770269]
61. RUVBL1 ENSGALG00000005931 9379 0.836 - - - - - - 0.836 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
62. PSMB2 ENSGALG00000026421 51885 0.836 - - - - - - 0.836 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
63. NUP50 ENSGALG00000014222 11743 0.836 - - - - - - 0.836 - - - nucleoporin 50 [Source:NCBI gene;Acc:418240]
64. MORF4L1 ENSGALG00000008146 29940 0.835 - - - - - - 0.835 - - - mortality factor 4 like 1 [Source:NCBI gene;Acc:554283]
65. SNRNP27 ENSGALG00000013883 22212 0.835 - - - - - - 0.835 - - - small nuclear ribonucleoprotein U4/U6.U5 subunit 27 [Source:HGNC Symbol;Acc:HGNC:30240]
66. NOC4L ENSGALG00000002272 9644 0.835 - - - - - - 0.835 - - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
67. VPS35 ENSGALG00000004375 8059 0.834 - - - - - - 0.834 - - - VPS35, retromer complex component [Source:NCBI gene;Acc:415750]
68. MED17 ENSGALG00000017218 5821 0.834 - - - - - - 0.834 - - - mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
69. UQCRC2 ENSGALG00000002490 23477 0.834 - - - - - - 0.834 - - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
70. GABARAPL2 ENSGALG00000003208 9195 0.834 - - - - - - 0.834 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
71. NEK6 ENSGALG00000001118 20333 0.833 - - - - - - 0.833 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
72. LEPROT ENSGALG00000011047 7132 0.832 - - - - - - 0.832 - - - leptin receptor overlapping transcript [Source:NCBI gene;Acc:424699]
73. PDDC1 5179 0.832 - - - - - - 0.832 - - - Parkinson disease 7 domain containing 1, transcript variant X6
74. EIF3B ENSGALG00000040999 49971 0.832 - - - - - - 0.832 - - - eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
75. PLRG1 ENSGALG00000009257 8613 0.831 - - - - - - 0.831 - - - pleiotropic regulator 1 [Source:HGNC Symbol;Acc:HGNC:9089]
76. TIMM10 ENSGALG00000004845 31395 0.831 - - - - - - 0.831 - - - translocase of inner mitochondrial membrane 10 [Source:NCBI gene;Acc:425202]
77. DDX19B ENSGALG00000039967 49600 0.83 - - - - - - 0.830 - - - ATP-dependent RNA helicase DDX19B [Source:NCBI gene;Acc:426504]
78. TMEM167A ENSGALG00000027332 13862 0.83 - - - - - - 0.830 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
79. NXN 20202 0.83 - - - - - - 0.830 - - - nucleoredoxin, transcript variant X1
80. PRELID1 ENSGALG00000002990 55592 0.829 - - - - - - 0.829 - - - PRELI domain containing 1 [Source:NCBI gene;Acc:395819]
81. MOSPD1 ENSGALG00000006132 8503 0.828 - - - - - - 0.828 - - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
82. CASK ENSGALG00000042400 8485 0.828 - - - - - - 0.828 - - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
83. SNRNP40 ENSGALG00000000615 32298 0.828 - - - - - - 0.828 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
84. PSMB7 ENSGALG00000001103 42683 0.828 - - - - - - 0.828 - - - proteasome subunit beta 7 [Source:NCBI gene;Acc:378915]
85. NDUFA12 ENSGALG00000011325 19807 0.828 - - - - - - 0.828 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
86. KCTD2 ENSGALG00000007934 15085 0.827 - - - - - - 0.827 - - - potassium channel tetramerization domain containing 2 [Source:NCBI gene;Acc:422116]
87. AP2A2 ENSGALG00000006799 13874 0.826 - - - - - - 0.826 - - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
88. CPSF6 ENSGALG00000019355 7634 0.825 - - - - - - 0.825 - - - cleavage and polyadenylation specific factor 6 [Source:NCBI gene;Acc:417844]
89. BMS1 ENSGALG00000002624 8339 0.824 - - - - - - 0.824 - - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
90. PAXIP1 ENSGALG00000036064 3120 0.824 - - - - - - 0.824 - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
91. GGA.31975 GGA.31975 8825 0.824 - - - - - - 0.824 - - -
92. TOMM20 ENSGALG00000035299 23431 0.823 - - - - - - 0.823 - - - translocase of outer mitochondrial membrane 20 [Source:HGNC Symbol;Acc:HGNC:20947]
93. RPS3A ENSGALG00000010077 292185 0.823 - - - - - - 0.823 - - - ribosomal protein S3A [Source:NCBI gene;Acc:422477]
94. SMC4 ENSGALG00000009553 15715 0.822 - - - - - - 0.822 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
95. DYNC1H1 ENSGALG00000011330 16400 0.822 - - - - - - 0.822 - - - dynein cytoplasmic 1 heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:2961]
96. HSPA4 ENSGALG00000040882 20966 0.822 - - - - - - 0.822 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
97. PSMD12 ENSGALG00000026225 17473 0.821 - - - - - - 0.821 - - - proteasome 26S subunit, non-ATPase 12 [Source:NCBI gene;Acc:417425]
98. SSR3 ENSGALG00000028683 24334 0.821 - - - - - - 0.821 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
99. MAP3K7 ENSGALG00000015596 15164 0.82 - - - - - - 0.820 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
100. CNI CNI 18453 0.82 - - - - - - 0.820 - - -

There are 679 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA