Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RPL3

Gene Name Gene ID Reads Annotation
RPL3 ENSGALG00000012172 118287 ribosomal protein L3 [Source:NCBI gene;Acc:418016]











Genes with expression patterns similar to RPL3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RPL3 ENSGALG00000012172 118287 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein L3 [Source:NCBI gene;Acc:418016]
2. ATP5G3 168626 0.914 - - - - - - 0.914 - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
3. HNRNPM ENSGALG00000000377 40684 0.903 - - - - - - 0.903 - - - heterogeneous nuclear ribonucleoprotein M [Source:NCBI gene;Acc:420054]
4. SMARCE1 ENSGALG00000003882 49063 0.883 - - - - - - 0.883 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:NCBI gene;Acc:420047]
5. LRPPRC ENSGALG00000009967 17091 0.86 - - - - - - 0.860 - - - leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
6. LUM ENSGALG00000011271 44020 0.852 - - - - - - 0.852 - - - lumican [Source:NCBI gene;Acc:417891]
7. RAP1B ENSGALG00000009927 26562 0.849 - - - - - - 0.849 - - - RAP1B, member of RAS oncogene family [Source:NCBI gene;Acc:417840]
8. UBE2L3 ENSGALG00000036739 21401 0.845 - - - - - - 0.845 - - - ubiquitin conjugating enzyme E2 L3 [Source:NCBI gene;Acc:416769]
9. DHFR ENSGALG00000026757 18478 0.841 - - - - - - 0.841 - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
10. IFT20 ENSGALG00000005707 23973 0.841 - - - - - - 0.841 - - - intraflagellar transport 20 [Source:HGNC Symbol;Acc:HGNC:30989]
11. ZNF644 ENSGALG00000034253 28348 0.83 - - - - - - 0.830 - - - zinc finger protein 644 [Source:HGNC Symbol;Acc:HGNC:29222]
12. SLC9A3R1 ENSGALG00000007650 13053 0.826 - - - - - - 0.826 - - - SLC9A3 regulator 1 [Source:NCBI gene;Acc:422108]
13. HNRNPH3 ENSGALG00000003947 28724 0.82 - - - - - - 0.820 - - - heterogeneous nuclear ribonucleoprotein H3 [Source:NCBI gene;Acc:423686]
14. SUB1 ENSGALG00000003248 56412 0.816 - - - - - - 0.816 - - - SUB1 homolog, transcriptional regulator [Source:NCBI gene;Acc:427425]
15. PPIG ENSGALG00000009839 24114 0.814 - - - - - - 0.814 - - - peptidylprolyl isomerase G [Source:HGNC Symbol;Acc:HGNC:14650]
16. TMEM18 ENSGALG00000028744 11779 0.81 - - - - - - 0.810 - - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
17. CDCA4 ENSGALG00000011692 10381 0.806 - - - - - - 0.806 - - - cell division cycle associated 4 [Source:NCBI gene;Acc:423500]
18. RAB12 ENSGALG00000033608 14160 0.805 - - - - - - 0.805 - - - RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
19. CNOT6 ENSGALG00000034316 10496 0.804 - - - - - - 0.804 - - - CCR4-NOT transcription complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14099]
20. SET ENSGALG00000004701 103296 0.801 - - - - - - - - - 0.801 SET nuclear proto-oncogene [Source:NCBI gene;Acc:417210]
21. MATR3 ENSGALG00000002478 12793 0.8 - - - - - - 0.800 - - - matrin 3 [Source:NCBI gene;Acc:373948]
22. DAPK3 ENSGALG00000037733 6215 0.8 - - - - - - 0.800 - - - death-associated protein kinase 3, transcript variant X2
23. CCNYL1 ENSGALG00000008485 11958 0.796 - - - - - - 0.796 - - - cyclin Y like 1
24. HDAC8 ENSGALG00000004825 12066 0.795 - - - - - - 0.795 - - - histone deacetylase 8, transcript variant X2
25. CTBPL ENSGALG00000007642 14238 0.793 - - - - - - 0.793 - - - C-terminal binding protein-like [Source:NCBI gene;Acc:416354]
26. DNAJC7 ENSGALG00000042796 14597 0.791 - - - - - - 0.791 - - - DnaJ heat shock protein family (Hsp40) member C7 [Source:NCBI gene;Acc:428312]
27. MCM3 ENSGALG00000016676 16934 0.791 - - - - - - 0.791 - - - minichromosome maintenance complex component 3 [Source:NCBI gene;Acc:422043]
28. ARHGAP32 ENSGALG00000043511 7916 0.791 - - - - - - 0.791 - - - Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:HGNC:17399]
29. SPATA20 ENSGALG00000006857 3506 0.79 - - - - - - - - - 0.790 spermatogenesis associated 20 [Source:HGNC Symbol;Acc:HGNC:26125]
30. GPC1 ENSGALG00000040316 13364 0.79 - - - - - - 0.790 - - - glypican 1 [Source:NCBI gene;Acc:424770]
31. CXCL12 ENSGALG00000041346 4128 0.787 - - - - - - 0.787 - - - C-X-C motif chemokine ligand 12 [Source:NCBI gene;Acc:395180]
32. UBALD1 ENSGALG00000007619 8536 0.78 - - - - - 0.780 - - - - UBA like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29576]
33. FAM192A ENSGALG00000021473 10213 0.779 - - - - - - 0.779 - - - family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
34. EIF1B ENSGALG00000038646 9508 0.779 - - - - - - 0.779 - - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
35. MCM6 ENSGALG00000012348 12523 0.779 - - - - - - 0.779 - - - minichromosome maintenance complex component 6 [Source:NCBI gene;Acc:424295]
36. FAT1 ENSGALG00000013579 6030 0.778 - - - - - - 0.778 - - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
37. C9orf64 ENSGALG00000012589 6097 0.778 - - - - - - 0.778 - - - chromosome 9 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:28144]
38. Sep-06 Sep-06 5961 0.778 - - - - - - 0.778 - - -
39. WDHD1 ENSGALG00000012199 3570 0.778 - - - - - - 0.778 - - - WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23170]
40. EIF3D ENSGALG00000012529 40887 0.778 - - - - - - 0.778 - - - eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
41. HIPK3 ENSGALG00000011695 6842 0.776 - - - - - - - - - 0.776 homeodomain interacting protein kinase 3 [Source:NCBI gene;Acc:421597]
42. USPL1 ENSGALG00000017079 6263 0.775 - - - - - - 0.775 - - - ubiquitin specific peptidase like 1 [Source:NCBI gene;Acc:395436]
43. EFTUD2 ENSGALG00000000988 17913 0.774 - - - - - - 0.774 - - - elongation factor Tu GTP binding domain containing 2 [Source:NCBI gene;Acc:428281]
44. ZEB1 ENSGALG00000007260 9277 0.774 - - - - - - 0.774 - - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
45. CORO1C ENSGALG00000004901 7055 0.773 - - - - - - 0.773 - - - coronin 1C [Source:NCBI gene;Acc:416893]
46. PDLIM4 ENSGALG00000039872 7823 0.772 - - - - - - 0.772 - - - PDZ and LIM domain 4 [Source:NCBI gene;Acc:395643]
47. RWDD3 ENSGALG00000038421 10909 0.769 - - - - - - - - - 0.769 RWD domain containing 3 [Source:NCBI gene;Acc:424481]
48. C15H12ORF49 C15H12ORF49 13250 0.769 - - - - - - 0.769 - - -
49. RNF141 ENSGALG00000029586 4962 0.762 - - - - - - 0.762 - - - ring finger protein 141 [Source:NCBI gene;Acc:423039]
50. KLC1 ENSGALG00000011528 1621 0.761 - - - - - - - - - 0.761 kinesin light chain 1, transcript variant X6
51. LRPAP1 ENSGALG00000015612 3526 0.759 - - - - - - 0.759 - - - LDL receptor related protein associated protein 1 [Source:NCBI gene;Acc:395936]
52. VSX1 ENSGALG00000037576 1517 0.759 - - - - - - 0.759 - - - visual system homeobox 1 [Source:NCBI gene;Acc:395537]
53. COPS2 ENSGALG00000000404 8980 0.754 - - - - - - - - - 0.754 COP9 signalosome subunit 2 [Source:NCBI gene;Acc:430917]
54. INTS4 ENSGALG00000000091 5965 0.752 - - - - - - 0.752 - - - integrator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:25048]
55. F2RL2 ENSGALG00000023379 1049 0.752 - - - - - - - - - 0.752 coagulation factor II thrombin receptor like 2 [Source:HGNC Symbol;Acc:HGNC:3539]
56. LSM5 ENSGALG00000041625 22307 0.751 - - - - 0.751 - - - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
57. ARID3B ENSGALG00000001376 4290 0.75 - - - - - - - - - 0.750 AT-rich interaction domain 3B [Source:NCBI gene;Acc:100859297]
58. CLTA ENSGALG00000015326 26867 0.747 - - - - 0.747 - - - - - clathrin light chain A [Source:NCBI gene;Acc:427284]
59. TOP3B ENSGALG00000030051 5953 0.74 - - - - - - - - - 0.740 DNA topoisomerase III beta [Source:NCBI gene;Acc:416771]
60. TCF21 ENSGALG00000029024 8252 0.739 - - - - - 0.739 - - - - transcription factor 21 [Source:NCBI gene;Acc:421697]
61. TCF25 ENSGALG00000000129 7587 0.738 - - - - - - - - - 0.738 transcription factor 25 [Source:HGNC Symbol;Acc:HGNC:29181]
62. LOC770492 ENSGALG00000027778 695 0.735 - - - - - - - - - 0.735 ras-related and estrogen-regulated growth inhibitor-like
63. HNRNPD ENSGALG00000011184 10686 0.731 - - - - - - - - - 0.731 heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
64. TRAPPC12 ENSGALG00000016387 2593 0.731 - - - - - - - - - 0.731 trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
65. FAH ENSGALG00000006482 589 0.731 - - - - - 0.731 - - - - fumarylacetoacetate hydrolase [Source:NCBI gene;Acc:415482]
66. CASP8AP2 ENSGALG00000015611 5657 0.73 - - - - - - - - - 0.730 caspase 8 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1510]
67. COMMD7 ENSGALG00000006630 11491 0.73 - - - - - - - - - 0.730 COMM domain containing 7 [Source:NCBI gene;Acc:419286]
68. UBB ENSGALG00000004509 139598 0.729 - - - - 0.729 - - - - - Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
69. HMGB2 ENSGALG00000010745 89235 0.727 - - - - 0.727 - - - - - high mobility group box 2 [Source:NCBI gene;Acc:396482]
70. SPERT ENSGALG00000016981 145 0.723 - - - - - - - - - 0.723 spermatid associated [Source:NCBI gene;Acc:418848]
71. CCNI ENSGALG00000011457 3203 0.723 - - - - - - - - - 0.723 cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
72. U3 U3 1604 0.722 - - - - - - - - - 0.722
73. CD2AP ENSGALG00000016720 8852 0.722 - - - - - - - - - 0.722 Gallus gallus CD2 associated protein (CD2AP), mRNA. [Source:RefSeq mRNA;Acc:NM_001318403]
74. CCDC66 ENSGALG00000005450 1262 0.722 - - - - - - - - - 0.722 coiled-coil domain containing 66 [Source:HGNC Symbol;Acc:HGNC:27709]
75. ARID1B ENSGALG00000013683 3397 0.72 - - - - - - - - - 0.720 AT-rich interaction domain 1B [Source:HGNC Symbol;Acc:HGNC:18040]
76. SH3BP2 ENSGALG00000015665 431 0.72 - - - - - - - - - 0.720 SH3 domain binding protein 2 [Source:NCBI gene;Acc:422883]
77. HAND1 ENSGALG00000035104 2351 0.719 - - - - - 0.719 - - - - heart and neural crest derivatives expressed 1 [Source:NCBI gene;Acc:395812]
78. KIDINS220 ENSGALG00000016409 854 0.718 - - - - - - - - - 0.718 kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
79. SIPA1L2 ENSGALG00000037506 3651 0.718 - - - - - 0.718 - - - - signal induced proliferation associated 1 like 2 [Source:HGNC Symbol;Acc:HGNC:23800]
80. BRD9 4377 0.716 - - 0.716 - - - - - - - bromodomain containing 9, transcript variant X3
81. PDIA5 ENSGALG00000011689 6913 0.714 - - 0.714 - - - - - - - protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
82. RPS20 ENSGALG00000014432 209638 0.71 - 0.710 - - - - - - - - ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
83. RPS27A ENSGALG00000036790 249359 0.706 - - - - - 0.706 - - - - ribosomal protein S27a [Source:NCBI gene;Acc:395796]
84. RPS6 ENSGALG00000015082 307412 0.706 0.706 - - - - - - - - - ribosomal protein S6 [Source:NCBI gene;Acc:396148]
85. SUV39H2 ENSGALG00000013920 4360 0.706 - - - - - - - - - 0.706 suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
86. LMO7 ENSGALG00000016920 3809 0.705 - - - - - 0.705 - - - - LIM domain 7 [Source:HGNC Symbol;Acc:HGNC:6646]
87. ZNF207 ENSGALG00000003454 47086 0.705 0.705 - - - - - - - - - zinc finger protein 207 [Source:HGNC Symbol;Acc:HGNC:12998]
88. BRT-1 BRT-1 26083 0.702 - - - - - - - - - 0.702
89. ROMO1 ENSGALG00000027416 9560 0.702 - - - - - - - - - 0.702 reactive oxygen species modulator 1 [Source:NCBI gene;Acc:768833]
90. RHOT1 ENSGALG00000003397 5149 0.701 - - - - - - - - - 0.701 ras homolog family member T1 [Source:NCBI gene;Acc:417410]
91. VWA9 ENSGALG00000007491 4790 0.7 - - - - - - - - - 0.700 von Willebrand factor A domain containing 9 [Source:NCBI gene;Acc:415540]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA