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Results for RPL18A

Gene Name Gene ID Reads Annotation
RPL18A 278781 ribosomal protein L18a











Genes with expression patterns similar to RPL18A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RPL18A 278781 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribosomal protein L18a
2. DUT ENSGALG00000038032 34659 0.812 - - - - - - 0.812 - - - deoxyuridine triphosphatase [Source:NCBI gene;Acc:769338]
3. RPL36 ENSGALG00000000474 237707 0.801 0.801 - - - - - - - - - ribosomal protein L36 [Source:NCBI gene;Acc:373936]
4. ENSGALG00000006463 ENSGALG00000006463 45151 0.8 - - - - - - 0.800 - - -
5. NUTF2 ENSGALG00000001602 32832 0.795 - - - - - - 0.795 - - - nuclear transport factor 2 [Source:NCBI gene;Acc:415655]
6. SSBP1 ENSGALG00000012876 34256 0.795 - - - - - - 0.795 - - - single stranded DNA binding protein 1 [Source:NCBI gene;Acc:418122]
7. THRAP3 ENSGALG00000002144 21958 0.79 - - - - - - 0.790 - - - thyroid hormone receptor associated protein 3 [Source:NCBI gene;Acc:419623]
8. KPNA3 ENSGALG00000017009 17330 0.788 - - - - - - 0.788 - - - karyopherin subunit alpha 3 [Source:NCBI gene;Acc:418870]
9. RPL23 ENSGALG00000001634 246592 0.786 0.786 - - - - - - - - - Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
10. SEC11A ENSGALG00000037553 32123 0.783 - - - - - - 0.783 - - - SEC11 homolog A, signal peptidase complex subunit [Source:NCBI gene;Acc:415334]
11. EWSR1 ENSGALG00000008149 13014 0.783 - - - - - - 0.783 - - - EWS RNA binding protein 1 [Source:NCBI gene;Acc:417022]
12. NDUFA8 ENSGALG00000040987 49453 0.783 - - - - - - 0.783 - - - NADH:ubiquinone oxidoreductase subunit A8 [Source:NCBI gene;Acc:417112]
13. PPP1R7 ENSGALG00000031766 22187 0.781 - - - - - - 0.781 - - - protein phosphatase 1 regulatory subunit 7 [Source:NCBI gene;Acc:424844]
14. POLR2K ENSGALG00000036019 8962 0.778 - - - - - - 0.778 - - - RNA polymerase II subunit K [Source:HGNC Symbol;Acc:HGNC:9198]
15. EIF2S1 ENSGALG00000009565 63906 0.777 - - - - - - 0.777 - - - eukaryotic translation initiation factor 2 subunit alpha [Source:NCBI gene;Acc:423279]
16. PPIH ENSGALG00000004874 25558 0.777 - - - - - - 0.777 - - - peptidylprolyl isomerase H [Source:NCBI gene;Acc:419507]
17. SIKE1 ENSGALG00000002147 20836 0.777 - - - - - - 0.777 - - - suppressor of IKBKE 1 [Source:NCBI gene;Acc:419887]
18. RPL7 ENSGALG00000035252 247865 0.775 0.775 - - - - - - - - - ribosomal protein L7 [Source:NCBI gene;Acc:420182]
19. MORF4L1 ENSGALG00000008146 29940 0.775 - - - - - - 0.775 - - - mortality factor 4 like 1 [Source:NCBI gene;Acc:554283]
20. RPS21 ENSGALG00000005338 293390 0.775 0.775 - - - - - - - - - ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
21. ARL6IP1 ENSGALG00000006780 16471 0.773 - - - - - - 0.773 - - - ADP ribosylation factor like GTPase 6 interacting protein 1 [Source:NCBI gene;Acc:416604]
22. MRPL20 ENSGALG00000001542 28764 0.77 - - - - - - 0.770 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
23. RPS24 ENSGALG00000004871 173117 0.768 0.768 - - - - - - - - - ribosomal protein S24 [Source:NCBI gene;Acc:423726]
24. PDIA4 ENSGALG00000043006 22992 0.767 - - - - - - 0.767 - - - protein disulfide isomerase family A member 4 [Source:NCBI gene;Acc:420785]
25. MT-ND4L MT-ND4L 12537 0.763 - - - - - - 0.763 - - -
26. RPL27 ENSGALG00000002837 302752 0.761 0.761 - - - - - - - - - ribosomal protein L27 [Source:NCBI gene;Acc:396280]
27. LUC7L2 ENSGALG00000036238 11817 0.761 - - - - - - 0.761 - - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
28. NDUFS7 ENSGALG00000009703 19674 0.76 - - - - - - 0.760 - - - NADH:ubiquinone oxidoreductase core subunit S7 [Source:HGNC Symbol;Acc:HGNC:7714]
29. TMEM199 ENSGALG00000023757 10781 0.76 - - - - - - 0.760 - - - transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
30. TXNDC12 ENSGALG00000010569 13822 0.76 - - - - - - 0.760 - - - thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
31. RCN2 ENSGALG00000039284 17848 0.758 - - - - - - 0.758 - - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
32. SAR1A ENSGALG00000004431 28833 0.758 - - - - - - 0.758 - - - secretion associated Ras related GTPase 1A [Source:HGNC Symbol;Acc:HGNC:10534]
33. BLMH ENSGALG00000004259 36907 0.756 - - - - - - 0.756 - - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
34. SOD1 ENSGALG00000015844 35836 0.756 - - - - - - 0.756 - - - superoxide dismutase 1, soluble [Source:NCBI gene;Acc:395938]
35. GLO1 ENSGALG00000010127 31662 0.755 - - - - - - 0.755 - - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
36. RPL29 ENSGALG00000026978 271790 0.754 0.754 - - - - - - - - - ribosomal protein L29 [Source:NCBI gene;Acc:770249]
37. RPS17 ENSGALG00000002157 142120 0.753 - - - - - - 0.753 - - - ribosomal protein S17 [Source:NCBI gene;Acc:374053]
38. DKC1 ENSGALG00000005054 30350 0.752 - - - - - - 0.752 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
39. PTP4A2 ENSGALG00000003265 24826 0.751 - - - - - - 0.751 - - - protein tyrosine phosphatase type IVA, member 2 [Source:HGNC Symbol;Acc:HGNC:9635]
40. ULK2 ENSGALG00000004727 10729 0.75 - - - - - - 0.750 - - - unc-51 like autophagy activating kinase 2 [Source:HGNC Symbol;Acc:HGNC:13480]
41. HMGB2 ENSGALG00000010745 89235 0.749 - - - - - - 0.749 - - - high mobility group box 2 [Source:NCBI gene;Acc:396482]
42. RSRC2 ENSGALG00000004493 9008 0.748 - - - - - - 0.748 - - - arginine and serine rich coiled-coil 2 [Source:NCBI gene;Acc:416864]
43. RPL36AL ENSGALG00000004952 205590 0.748 - - - - - - 0.748 - - - ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
44. USP14 ENSGALG00000014920 18778 0.748 - - - - - - 0.748 - - - ubiquitin specific peptidase 14 [Source:HGNC Symbol;Acc:HGNC:12612]
45. EIF4A2 ENSGALG00000008684 58507 0.746 - - - - - - 0.746 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
46. NAA38 ENSGALG00000045783 11229 0.745 - - - - - - 0.745 - - - N(alpha)-acetyltransferase 38, NatC auxiliary subunit, transcript variant X3
47. C C 7669 0.745 - - - - - - 0.745 - - -
48. TXNDC17 ENSGALG00000027950 45004 0.744 - - - - - - 0.744 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
49. EIF3L ENSGALG00000012296 42627 0.744 - - - - - - 0.744 - - - eukaryotic translation initiation factor 3 subunit L [Source:NCBI gene;Acc:418033]
50. PDCD10 ENSGALG00000009477 7061 0.744 - - - - - - 0.744 - - - programmed cell death 10 [Source:NCBI gene;Acc:425003]
51. DNAJC9 ENSGALG00000002701 19249 0.744 - - - - - - 0.744 - - - DnaJ heat shock protein family (Hsp40) member C9 [Source:NCBI gene;Acc:423640]
52. C19orf70 ENSGALG00000026847 19315 0.743 - - - - - - 0.743 - - - chromosome 19 open reading frame 70 [Source:HGNC Symbol;Acc:HGNC:33702]
53. SMARCA5 ENSGALG00000009913 20059 0.742 - - - - - - 0.742 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:HGNC Symbol;Acc:HGNC:11101]
54. ENSGALG00000009044 ENSGALG00000009044 14492 0.742 - - - - - - 0.742 - - -
55. RPL14 ENSGALG00000043379 239812 0.742 0.742 - - - - - - - - - ribosomal protein L14
56. USP1 ENSGALG00000010957 8297 0.741 - - - - - - 0.741 - - - ubiquitin specific peptidase 1 [Source:NCBI gene;Acc:424685]
57. CUL4B ENSGALG00000008559 16864 0.741 - - - - - - 0.741 - - - cullin 4B [Source:HGNC Symbol;Acc:HGNC:2555]
58. MYCBP ENSGALG00000024295 13273 0.74 - - - - - - 0.740 - - - MYC binding protein
59. AZIN1 ENSGALG00000029295 11085 0.739 - - - - - - 0.739 - - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
60. DJ-1 DJ-1 13462 0.739 - - - - - - 0.739 - - -
61. RAD21 ENSGALG00000029523 25658 0.738 - - - - - - 0.738 - - - RAD21 cohesin complex component [Source:NCBI gene;Acc:420286]
62. BRD7 ENSGALG00000003786 26858 0.738 - - - - - - 0.738 - - - bromodomain containing 7 [Source:NCBI gene;Acc:415730]
63. TXN ENSGALG00000015704 170016 0.737 0.737 - - - - - - - - - thioredoxin [Source:NCBI gene;Acc:396437]
64. EIF3B ENSGALG00000040999 49971 0.736 - - - - - - 0.736 - - - eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
65. RALGPS1 ENSGALG00000000906 7207 0.736 - - - - - - 0.736 - - - Ral GEF with PH domain and SH3 binding motif 1 [Source:HGNC Symbol;Acc:HGNC:16851]
66. DYNLT1 ENSGALG00000019979 38176 0.736 - - - - - - 0.736 - - - dynein light chain Tctex-type 1 [Source:HGNC Symbol;Acc:HGNC:11697]
67. PARP1 ENSGALG00000009228 39433 0.736 - - - - - - 0.736 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
68. SLC25A17 ENSGALG00000012013 13948 0.735 - - - - - - 0.735 - - - solute carrier family 25 member 17 [Source:HGNC Symbol;Acc:HGNC:10987]
69. RPS23 ENSGALG00000015617 430299 0.734 0.734 - - - - - - - - - ribosomal protein S23
70. HSPE1 ENSGALG00000009070 87567 0.734 0.734 - - - - - - - - - heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
71. GTF2H5 ENSGALG00000013733 12293 0.733 - - - - - - 0.733 - - - general transcription factor IIH subunit 5 [Source:NCBI gene;Acc:769754]
72. WDR75 ENSGALG00000045237 9484 0.733 - - - - - - 0.733 - - - WD repeat domain 75
73. AATF ENSGALG00000005420 6501 0.732 - - - - - - 0.732 - - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
74. PGD ENSGALG00000002797 15115 0.732 - - - - - - 0.732 - - - phosphogluconate dehydrogenase [Source:NCBI gene;Acc:419450]
75. TM9SF2 ENSGALG00000016878 11548 0.731 - - - - - - 0.731 - - - transmembrane 9 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11865]
76. ATP5F1 80590 0.73 - - - - - - 0.730 - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit B1
77. GARS ENSGALG00000005694 18264 0.73 - - - - - - 0.730 - - - glycyl-tRNA synthetase [Source:NCBI gene;Acc:428403]
78. NKIRAS2 ENSGALG00000028971 3414 0.73 - - - - - - 0.730 - - - NFKB inhibitor interacting Ras like 2 [Source:NCBI gene;Acc:420032]
79. ZC3H13 ENSGALG00000016984 21043 0.729 - - - - - - 0.729 - - - zinc finger CCCH-type containing 13 [Source:HGNC Symbol;Acc:HGNC:20368]
80. NDUFS8 ENSGALG00000040173 24745 0.729 - - - - - - 0.729 - - - NADH:ubiquinone oxidoreductase core subunit S8 [Source:HGNC Symbol;Acc:HGNC:7715]
81. PNRC2 ENSGALG00000004122 19228 0.729 - - - - - - 0.729 - - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
82. UQCRC2 ENSGALG00000002490 23477 0.728 - - - - - - 0.728 - - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
83. C1H11ORF73 C1H11ORF73 10071 0.727 - - - - - - 0.727 - - -
84. TXN2 ENSGALG00000012532 12518 0.727 - - - - - - 0.727 - - - thioredoxin 2 [Source:NCBI gene;Acc:426978]
85. C10orf88 ENSGALG00000000011 6026 0.726 - - - - - - 0.726 - - - chromosome 10 open reading frame 88 [Source:HGNC Symbol;Acc:HGNC:25822]
86. NDUFA1 ENSGALG00000008613 20410 0.726 - - - - - - 0.726 - - - NADH:ubiquinone oxidoreductase subunit A1 [Source:NCBI gene;Acc:772150]
87. RER1 ENSGALG00000021683 9074 0.726 - - - - - - 0.726 - - - retention in endoplasmic reticulum sorting receptor 1 [Source:NCBI gene;Acc:419397]
88. SLC25A3 ENSGALG00000011514 62606 0.725 - - - - - - 0.725 - - - solute carrier family 25 member 3 [Source:NCBI gene;Acc:417924]
89. RPS13 ENSGALG00000006096 170517 0.724 - - 0.724 - - - - - - - ribosomal protein S13 [Source:NCBI gene;Acc:414782]
90. MTAP ENSGALG00000008174 10976 0.724 - - - - - - 0.724 - - - methylthioadenosine phosphorylase [Source:NCBI gene;Acc:431261]
91. ERLIN1 ENSGALG00000003308 6427 0.724 - - - - - - 0.724 - - - ER lipid raft associated 1 [Source:NCBI gene;Acc:423670]
92. YWHAZ ENSGALG00000031387 84985 0.723 - - - - - - 0.723 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
93. TMCO1 ENSGALG00000033460 22822 0.722 - - - - - - 0.722 - - - transmembrane and coiled-coil domains 1 [Source:HGNC Symbol;Acc:HGNC:18188]
94. ENSGALG00000016887 ENSGALG00000016887 20086 0.722 - - - - - - 0.722 - - -
95. SALL4 ENSGALG00000041365 6760 0.722 0.722 - - - - - - - - - spalt like transcription factor 4 [Source:NCBI gene;Acc:769286]
96. G3BP1 ENSGALG00000004160 36795 0.722 - - - - - - 0.722 - - - G3BP stress granule assembly factor 1 [Source:NCBI gene;Acc:416265]
97. KDM5B ENSGALG00000038948 50645 0.721 - - - - - - 0.721 - - - lysine demethylase 5B [Source:NCBI gene;Acc:421168]
98. PSMB4 ENSGALG00000000905 46735 0.721 - - - - - - 0.721 - - - proteasome subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:9541]
99. SUB1 ENSGALG00000003248 56412 0.721 0.721 - - - - - - - - - SUB1 homolog, transcriptional regulator [Source:NCBI gene;Acc:427425]
100. DEK ENSGALG00000012684 14179 0.72 - - - - - - 0.720 - - - DEK proto-oncogene [Source:NCBI gene;Acc:420828]

There are 44 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA