Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for RPH3A_1

Gene Name Gene ID Reads Annotation
RPH3A_1 RPH3A_1 399










Genes with expression patterns similar to RPH3A_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RPH3A_1 RPH3A_1 399 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. btr30 ENSDARG00000102591 506 1.806 0.875 0.931 - - - - - - - bloodthirsty-related gene family, member 30 [Source:ZFIN;Acc:ZDB-GENE-040426-1407]
3. sumf1 ENSDARG00000044203, ENSDARG00000114368 245 1.76 - 0.931 - - - - 0.829 - - sulfatase modifying factor 1 [Source:ZFIN;Acc:ZDB-GENE-060421-3113]
4. si:ch211-120e1.6 si:ch211-120e1.6 292 1.726 - 0.972 - - - - 0.754 - -
5. pou2f1b ENSDARG00000007996 2172 1.714 - 0.936 - - - 0.778 - - - POU class 2 homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2422]
6. C5H11orf1 C5H11orf1 78 1.699 0.764 0.935 - - - - - - -
7. si:dkey-193h7.5 si:dkey-193h7.5 156 1.691 0.798 0.893 - - - - - - -
8. gpr37b ENSDARG00000033296 283 1.676 - - 0.802 - - - 0.874 - - G protein-coupled receptor 37b [Source:ZFIN;Acc:ZDB-GENE-041210-264]
9. PHF13 ENSDARG00000102023 1102 1.657 - 0.950 - - - - 0.707 - - PHD finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-121113-2]
10. katnb1 ENSDARG00000005456, ENSDARG00000110223, ENSDARG00000116933 630 1.652 - 0.939 - - - - 0.713 - - katanin p80 (WD repeat containing) subunit B 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1954]
11. tdrd3 ENSDARG00000025421 633 1.649 - 0.928 - - - - - 0.721 - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
12. GID4 ENSDARG00000079482 1375 1.633 - 0.895 - - - - 0.738 - - GID complex subunit 4 homolog [Source:HGNC Symbol;Acc:HGNC:28453]
13. ZC3H12A_1 ZC3H12A_1 558 1.624 - 0.898 - - - - - 0.726 -
14. cherp ENSDARG00000021812 286 1.622 - - - - - 0.808 0.814 - - calcium homeostasis endoplasmic reticulum protein [Source:ZFIN;Acc:ZDB-GENE-040407-1]
15. CR382363.1 ENSDARG00000097381 1637 1.594 - 0.846 0.748 - - - - - -
16. lmbr1l ENSDARG00000004745 861 1.591 - 0.884 - - - - 0.707 - - limb development membrane protein 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9906]
17. atrnl1b ENSDARG00000006420 641 1.59 0.763 - - - - - 0.827 - - attractin-like 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8092]
18. cant1b_1 ENSDARG00000102977 447 1.556 - 0.828 - - - - 0.728 - - calcium activated nucleotidase 1b [Source:ZFIN;Acc:ZDB-GENE-040801-114]
19. MFSD3 MFSD3 407 1.55 - - 0.746 - - - 0.804 - -
20. blmh ENSDARG00000025977 1011 1.533 - 0.829 - - - - 0.704 - - bleomycin hydrolase [Source:ZFIN;Acc:ZDB-GENE-030131-8485]
21. uchl1 ENSDARG00000026871 1578 1.527 - 0.802 - - - 0.725 - - - ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-030131-3844]
22. si:ch211-208h7.4 si:ch211-208h7.4 1334 1.526 - 0.785 - - - - 0.741 - -
23. ELFN1 ELFN1 59 1.516 - - - - - 0.764 - 0.752 -
24. lmna ENSDARG00000013415 1562 1.515 0.709 0.806 - - - - - - - lamin A [Source:ZFIN;Acc:ZDB-GENE-020424-3]
25. ft1 ENSDARG00000059056 102 1.507 - - 0.790 - - - 0.717 - - alpha(1,3)fucosyltransferase gene 1 [Source:ZFIN;Acc:ZDB-GENE-990715-17]
26. stk25a ENSDARG00000002210 372 1.504 - - - - 0.765 - 0.739 - - serine/threonine kinase 25a [Source:ZFIN;Acc:ZDB-GENE-041010-92]
27. CR847998.1 ENSDARG00000104784 518 1.486 - - - - - 0.782 - 0.704 -
28. CABZ01080116.1 CABZ01080116.1 407 1.484 - - - - - 0.729 0.755 - -
29. habp2 ENSDARG00000057498 75 1.476 - - 0.719 - - - 0.757 - - hyaluronan binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4721]
30. GALNT9 ENSDARG00000006832 120 1.474 - - - - - 0.763 - 0.711 - polypeptide N-acetylgalactosaminyltransferase 9 [Source:ZFIN;Acc:ZDB-GENE-060526-21]
31. ATP6AP1L ATP6AP1L 164 1.467 - - - - - 0.703 - 0.764 -
32. map1aa ENSDARG00000059601 599 1.465 - - - - - 0.737 - 0.728 - microtubule-associated protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-100426-2]
33. tbx16 ENSDARG00000007329 255 1.46 - - - - - 0.746 - 0.714 - T-box 16 [Source:ZFIN;Acc:ZDB-GENE-990615-5]
34. phactr3a ENSDARG00000058243 150 1.458 - - - - - 0.742 - 0.716 - phosphatase and actin regulator 3a [Source:ZFIN;Acc:ZDB-GENE-080220-4]
35. DUSP23 DUSP23 121 1.445 - - - - - - 0.732 0.713 -
36. hmga1b ENSDARG00000070951 377 1.438 - - - - - 0.719 - 0.719 - high mobility group AT-hook 1b [Source:ZFIN;Acc:ZDB-GENE-061013-204]
37. nfkbiaa ENSDARG00000005481 948 1.417 0.710 - - - - - 0.707 - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a [Source:ZFIN;Acc:ZDB-GENE-040426-2227]
38. cib1 ENSDARG00000103118 291 0.997 - 0.997 - - - - - - - calcium and integrin binding 1 (calmyrin) [Source:ZFIN;Acc:ZDB-GENE-050417-170]
39. itgb1b.2 ENSDARG00000022689 523 0.985 - 0.985 - - - - - - - integrin, beta 1b.2 [Source:ZFIN;Acc:ZDB-GENE-040426-2598]
40. zic5 ENSDARG00000016022 1034 0.983 - 0.983 - - - - - - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
41. NRBP2 NRBP2 127 0.978 - 0.978 - - - - - - -
42. amn ENSDARG00000062947 36 0.975 - 0.975 - - - - - - - amnion associated transmembrane protein [Source:ZFIN;Acc:ZDB-GENE-060810-59]
43. zbtb4 ENSDARG00000105255 362 0.97 - 0.970 - - - - - - - zinc finger and BTB domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-100318-5]
44. si:ch211-132g1.3 ENSDARG00000089477 769 0.969 - 0.969 - - - - - - - si:ch211-132g1.3 [Source:ZFIN;Acc:ZDB-GENE-090312-148]
45. chsy3 ENSDARG00000069472 271 0.968 - 0.968 - - - - - - - chondroitin sulfate synthase 3 [Source:ZFIN;Acc:ZDB-GENE-030616-4]
46. scinla_1 ENSDARG00000102415, ENSDARG00000117110 544 0.967 - 0.967 - - - - - - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
47. si:ch211-11n16.2 ENSDARG00000099779 417 0.966 - 0.966 - - - - - - - si:ch211-11n16.2 [Source:ZFIN;Acc:ZDB-GENE-041008-77]
48. si:dkey-27i16.3 si:dkey-27i16.3 494 0.965 - 0.965 - - - - - - -
49. il4r il4r 75 0.965 - 0.965 - - - - - - -
50. myof ENSDARG00000006112 618 0.965 - 0.965 - - - - - - - myoferlin [Source:ZFIN;Acc:ZDB-GENE-040426-1138]
51. pnpla7a ENSDARG00000062986 1793 0.964 - 0.964 - - - - - - - patatin-like phospholipase domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-070112-1812]
52. e2f8 ENSDARG00000057323 1432 0.961 - 0.961 - - - - - - - E2F transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-041111-260]
53. wu:fd14a06 wu:fd14a06 243 0.958 - 0.958 - - - - - - -
54. aggf1 ENSDARG00000060109 574 0.958 - 0.958 - - - - - - - angiogenic factor with G patch and FHA domains 1 [Source:ZFIN;Acc:ZDB-GENE-060929-836]
55. aldh16a1 ENSDARG00000037935 617 0.956 - 0.956 - - - - - - - aldehyde dehydrogenase 16 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-070112-2062]
56. PARD3B PARD3B 401 0.956 - 0.956 - - - - - - -
57. siah1 ENSDARG00000030871 1590 0.955 - 0.955 - - - - - - - siah E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-010319-31]
58. kif2c ENSDARG00000076228 2281 0.953 - 0.953 - - - - - - - kinesin family member 2C [Source:ZFIN;Acc:ZDB-GENE-070912-298]
59. ca16b ENSDARG00000060123 389 0.953 - 0.953 - - - - - - - carbonic anhydrase XVI b [Source:ZFIN;Acc:ZDB-GENE-080818-1]
60. prdm10 ENSDARG00000104251 510 0.952 - 0.952 - - - - - - - PR domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-050419-74]
61. zdhhc6 ENSDARG00000075721 1494 0.95 - 0.950 - - - - - - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
62. vsig10 ENSDARG00000058605, ENSDARG00000111389 361 0.95 - 0.950 - - - - - - - V-set and immunoglobulin domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-7476]
63. prdm9 ENSDARG00000005382, ENSDARG00000110150 572 0.949 - 0.949 - - - - - - - PR domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1319]
64. lias ENSDARG00000022845, ENSDARG00000112666 407 0.948 - 0.948 - - - - - - - lipoic acid synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1528]
65. MSLNL MSLNL 41 0.947 - 0.947 - - - - - - -
66. si:ch211-191a16.2 ENSDARG00000095665 16 0.947 - 0.947 - - - - - - - si:ch211-191a16.2 [Source:ZFIN;Acc:ZDB-GENE-081028-45]
67. fbln5 ENSDARG00000039273 105 0.947 - 0.947 - - - - - - - fibulin 5 [Source:ZFIN;Acc:ZDB-GENE-041010-54]
68. FOXO6_1 FOXO6_1 73 0.947 - 0.947 - - - - - - -
69. si:dkey-261l7.2 ENSDARG00000094345 51 0.947 - 0.947 - - - - - - - si:dkey-261l7.2 [Source:ZFIN;Acc:ZDB-GENE-090313-288]
70. shq1 ENSDARG00000058522 123 0.947 - 0.947 - - - - - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:ZFIN;Acc:ZDB-GENE-070112-1412]
71. FP236276.2 FP236276.2 43 0.947 - 0.947 - - - - - - -
72. rac3b ENSDARG00000020795 1523 0.946 - 0.946 - - - - - - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
73. crfb12 ENSDARG00000052413 47 0.946 - 0.946 - - - - - - - cytokine receptor family member B12 [Source:ZFIN;Acc:ZDB-GENE-060421-4184]
74. si:ch73-83c10.2 si:ch73-83c10.2 22 0.946 - 0.946 - - - - - - -
75. faub ENSDARG00000043663, ENSDARG00000111416, ENSDARG00000113054 1451 0.946 - 0.946 - - - - - - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b [Source:ZFIN;Acc:ZDB-GENE-050417-416]
76. bbs4 ENSDARG00000063522 247 0.946 - 0.946 - - - - - - - Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
77. uroc1 ENSDARG00000070394 357 0.946 - 0.946 - - - - - - - urocanate hydratase 1 [Source:ZFIN;Acc:ZDB-GENE-081022-148]
78. gngt2a ENSDARG00000010680, ENSDARG00000110351 337 0.946 - 0.946 - - - - - - - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7595]
79. fam69c ENSDARG00000105040 295 0.946 - 0.946 - - - - - - - family with sequence similarity 69, member C [Source:ZFIN;Acc:ZDB-GENE-030131-8001]
80. BX321875.3 ENSDARG00000112569 24 0.945 - 0.945 - - - - - - -
81. esm1 ENSDARG00000104370 186 0.945 - 0.945 - - - - - - - endothelial cell-specific molecule 1 [Source:ZFIN;Acc:ZDB-GENE-060929-748]
82. slc25a5 ENSDARG00000092553 626 0.945 - 0.945 - - - - - - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 [Source:ZFIN;Acc:ZDB-GENE-020419-9]
83. ch25h ENSDARG00000045190 35 0.945 - 0.945 - - - - - - - cholesterol 25-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-041212-81]
84. drd3 ENSDARG00000032131, ENSDARG00000110679 25 0.945 - 0.945 - - - - - - - dopamine receptor D3 [Source:ZFIN;Acc:ZDB-GENE-021119-1]
85. CR759791.1 ENSDARG00000088591 160 0.945 - 0.945 - - - - - - - beta-1,3-galactosyltransferase 2-like [Source:NCBI gene;Acc:100537407]
86. gpr112b gpr112b 28 0.945 - 0.945 - - - - - - -
87. ttc9c ENSDARG00000007025 463 0.945 - 0.945 - - - - - - - tetratricopeptide repeat domain 9C [Source:ZFIN;Acc:ZDB-GENE-040426-1053]
88. cnstb ENSDARG00000042759 105 0.945 - 0.945 - - - - - - - consortin, connexin sorting protein b [Source:ZFIN;Acc:ZDB-GENE-041001-189]
89. C18H15orf61 C18H15orf61 104 0.944 - 0.944 - - - - - - -
90. med30 ENSDARG00000101115 133 0.944 - 0.944 - - - - - - - mediator complex subunit 30 [Source:ZFIN;Acc:ZDB-GENE-040426-1676]
91. pou4f1 ENSDARG00000005559 821 0.943 - 0.943 - - - - - - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
92. hmmr ENSDARG00000021794, ENSDARG00000111088 2009 0.942 - 0.942 - - - - - - - hyaluronan-mediated motility receptor (RHAMM) [Source:ZFIN;Acc:ZDB-GENE-030131-731]
93. cry5 ENSDARG00000019498 90 0.942 - 0.942 - - - - - - - cryptochrome circadian clock 5 [Source:ZFIN;Acc:ZDB-GENE-010426-8]
94. ostf1_1 ENSDARG00000091555, ENSDARG00000114550 75 0.942 - 0.942 - - - - - - - osteoclast stimulating factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-157]
95. azi1_1 azi1_1 1375 0.942 - 0.942 - - - - - - -
96. CABZ01080492.1 CABZ01080492.1 495 0.941 - 0.941 - - - - - - -
97. rab34b ENSDARG00000010977 590 0.94 - 0.940 - - - - - - - RAB34, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-091118-61]
98. N4BP2L1 N4BP2L1 573 0.94 - 0.940 - - - - - - -
99. LRIF1_1 LRIF1_1 228 0.94 - 0.940 - - - - - - -
100. cdkn2c ENSDARG00000057610 179 0.939 - 0.939 - - - - - - - cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-081104-145]

There are 1190 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA