Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RPGRIP1

Gene Name Gene ID Reads Annotation
RPGRIP1 ENSDARG00000076055 10 RPGR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-394]










Genes with expression patterns similar to RPGRIP1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RPGRIP1 ENSDARG00000076055 10 6 1.000 1.000 1.000 - 1.000 - - 1.000 1.000 RPGR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-394]
2. si:dkeyp-104f11.4 si:dkeyp-104f11.4 40 1.977 0.977 1.000 - - - - - - -
3. pcdh1g18 ENSDARG00000099447 7 1.967 - 1.000 - - 0.967 - - - - protocadherin 1 gamma 18 [Source:ZFIN;Acc:ZDB-GENE-050609-13]
4. pdzd4 175 1.965 0.965 1.000 - - - - - - - PDZ domain containing 4, transcript variant X2
5. CABZ01007222.1 CABZ01007222.1 78 1.913 0.913 1.000 - - - - - - -
6. cldnd ENSDARG00000006580 17 1.903 - 1.000 - - 0.903 - - - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
7. dyrk1aa ENSDARG00000063570 14 1.897 0.901 - 0.996 - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, a [Source:ZFIN;Acc:ZDB-GENE-050302-29]
8. si:ch211-188i4.4 5 1.887 - 1.000 - - - - - - 0.887 si:ch211-188i4.4, transcript variant X3
9. figf 48 1.853 - 1.000 0.853 - - - - - - c-fos induced growth factor, transcript variant X2
10. si:dkey-152b24.7 ENSDARG00000099715 26 1.848 1.000 - - - - - - - 0.848 si:dkey-152b24.7 [Source:ZFIN;Acc:ZDB-GENE-100921-77]
11. mfge8a ENSDARG00000015349 66 1.843 0.968 0.875 - - - - - - - milk fat globule-EGF factor 8 protein a [Source:ZFIN;Acc:ZDB-GENE-050327-9]
12. si:dkey-22i16.9 ENSDARG00000095949 16 1.839 - - - - 0.932 - - - 0.907 si:dkey-22i16.9 [Source:ZFIN;Acc:ZDB-GENE-090313-261]
13. acap3b ENSDARG00000099240 24 1.781 - - 0.986 - 0.795 - - - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3b [Source:ZFIN;Acc:ZDB-GENE-070209-274]
14. BX927122.3 BX927122.3 19 1.751 - 1.000 - - - - - - 0.751
15. UBXN11 ENSDARG00000053828 22 1.727 0.920 - 0.807 - - - - - - UBX domain protein 11 [Source:ZFIN;Acc:ZDB-GENE-100922-125]
16. GMEB2 ENSDARG00000093240 6 1.71 - - - - 1.000 - - 0.710 - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
17. fam184a ENSDARG00000014081 93 1.708 - - 0.947 - 0.761 - - - - family with sequence similarity 184, member A [Source:ZFIN;Acc:ZDB-GENE-041014-214]
18. dnajb2 ENSDARG00000058644 30 1.675 0.950 - - - 0.725 - - - - DnaJ (Hsp40) homolog, subfamily B, member 2 [Source:ZFIN;Acc:ZDB-GENE-061013-537]
19. plch2a ENSDARG00000059960 222 1.641 - 0.875 0.766 - - - - - - phospholipase C, eta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6367]
20. dapk3 ENSDARG00000074447 12 1.548 - 0.732 - - 0.816 - - - - death-associated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3026]
21. tnxb 30 1 - 1.000 - - - - - - - tenascin XB
22. si:ch211-198c19.2 si:ch211-198c19.2 165 1 - 1.000 - - - - - - -
23. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 1 - 1.000 - - - - - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
24. si:ch73-2d23.1 3 1 - - - - 1.000 - - - - si:ch73-2d23.1
25. zgc:172053 ENSDARG00000038321 9 1 - - - - 1.000 - - - - zgc:172053 [Source:ZFIN;Acc:ZDB-GENE-080219-25]
26. msgn1 ENSDARG00000070546 188 1 - 1.000 - - - - - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
27. si:ch211-204c5.6 si:ch211-204c5.6 7 1 - - - - 1.000 - - - -
28. si:dkey-19a16.2 ENSDARG00000058794 8 1 - 1.000 - - - - - - - si:dkey-19a16.2 [Source:ZFIN;Acc:ZDB-GENE-050208-493]
29. si:dkey-24h22.5 ENSDARG00000094556 4 1 - - 1.000 - - - - - - si:dkey-24h22.5 [Source:ZFIN;Acc:ZDB-GENE-090313-274]
30. aatkb ENSDARG00000104442 392 1 - 1.000 - - - - - - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
31. si:dkey-199m13.8 si:dkey-199m13.8 61 1 - 1.000 - - - - - - -
32. Metazoa_SRP_11 Metazoa_SRP_11 3 1 - - - - 1.000 - - - -
33. mcm5_1 ENSDARG00000019507 10 1 - 1.000 - - - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
34. fkbp6 ENSDARG00000030133, ENSDARG00000099077 6 1 - 1.000 - - - - - - - FK506 binding protein 6 [Source:NCBI gene;Acc:402839]
35. actl6b ENSDARG00000034107 9 1 - 1.000 - - - - - - - actin-like 6B [Source:ZFIN;Acc:ZDB-GENE-050522-191]
36. BX005294.2 ENSDARG00000109361 3 1 - 1.000 - - - - - - -
37. BX321870.1 ENSDARG00000098519 9 1 - 1.000 - - - - - - -
38. apnl ENSDARG00000090900 21 1 - 1.000 - - - - - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
39. vip ENSDARG00000078247 10 1 - 1.000 - - - - - - - vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
40. U1_4 U1_4 0 1 - 1.000 - - - - - - -
41. si:ch211-214j24.15 ENSDARG00000063481 8 1 - 1.000 - - - - - - - si:ch211-214j24.15 [Source:ZFIN;Acc:ZDB-GENE-110914-85]
42. vcam1 vcam1 243 1 - 1.000 - - - - - - -
43. dmrt1 ENSDARG00000007349 16 1 - 1.000 - - - - - - - doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]
44. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 1 - 1.000 - - - - - - -
45. gna15.3 ENSDARG00000056654, ENSDARG00000092948 9 1 - 1.000 - - - - - - - guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-050208-700]
46. ca10b ENSDARG00000009568 8 1 - 1.000 - - - - - - - carbonic anhydrase Xb [Source:ZFIN;Acc:ZDB-GENE-080815-2]
47. il17a/f3 ENSDARG00000041976 2 1 - - - - 1.000 - - - - interleukin 17a/f3 [Source:ZFIN;Acc:ZDB-GENE-041001-192]
48. DOCK4 DOCK4 78 1 - 1.000 - - - - - - -
49. snoU85_1 snoU85_1 2 1 - - 1.000 - - - - - -
50. zgc:165627 zgc:165627 4 1 - 1.000 - - - - - - -
51. CR388095.2 ENSDARG00000117604 76 1 1.000 - - - - - - - -
52. casp3b ENSDARG00000055045 54 1 - - - - 1.000 - - - - caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
53. si:dkeyp-59a8.1 si:dkeyp-59a8.1 6 1 - 1.000 - - - - - - -
54. pcbp3 ENSDARG00000054378 74 1 - 1.000 - - - - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
55. ALOX5_2 ALOX5_2 6 1 - 1.000 - - - - - - -
56. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 1 - 1.000 - - - - - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
57. si:dkey-188p4.1 si:dkey-188p4.1 1 1 - 1.000 - - - - - - -
58. dnase2 ENSDARG00000073893 141 1 1.000 - - - - - - - - deoxyribonuclease II, lysosomal [Source:ZFIN;Acc:ZDB-GENE-010724-16]
59. ZNF337_16 ZNF337_16 22 1 - 1.000 - - - - - - -
60. CABZ01085979.1 CABZ01085979.1 4 1 - 1.000 - - - - - - -
61. lhx5 ENSDARG00000057936 785 1 - 1.000 - - - - - - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
62. nid2b ENSDARG00000009471 4 1 - 1.000 - - - - - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
63. alp3 ENSDARG00000098063 0 1 - 1.000 - - - - - - - alkaline phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-120919-1]
64. zdhhc24 ENSDARG00000105134, ENSDARG00000110259, ENSDARG00000116301 6 1 1.000 - - - - - - - - zinc finger, DHHC-type containing 24 [Source:ZFIN;Acc:ZDB-GENE-040718-8]
65. si:dkey-273e13.2 si:dkey-273e13.2 0 1 - 1.000 - - - - - - -
66. si:rp71-36a1.3 ENSDARG00000071662 2 1 - 1.000 - - - - - - - si:rp71-36a1.3 [Source:ZFIN;Acc:ZDB-GENE-050208-566]
67. si:ch73-167f18.4 si:ch73-167f18.4 9 1 - - - - 1.000 - - - -
68. neu3.1 ENSDARG00000096382 9 1 - 1.000 - - - - - - - sialidase 3 (membrane sialidase), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061201-39]
69. scg2b ENSDARG00000038574 345 1 - 1.000 - - - - - - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
70. ctslb ENSDARG00000039173, ENSDARG00000074306 27150 1 - 1.000 - - - - - - - cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
71. grin2bb ENSDARG00000030376 60 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-061207-27]
72. sytl4 ENSDARG00000102433 19 1 - 1.000 - - - - - - - synaptotagmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-070209-217]
73. adam10b ENSDARG00000015502 26 1 - 1.000 - - - - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
74. mrm1 ENSDARG00000059658 38 1 1.000 - - - - - - - - mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060526-229]
75. galnt8b galnt8b 77 1 1.000 - - - - - - - -
76. si:ch211-108c6.2 14 1 - 1.000 - - - - - - - si:ch211-108c6.2
77. zgc:174224_1 ENSDARG00000093875 7 1 - 1.000 - - - - - - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
78. si:dkey-222h21.4 1 1 - 1.000 - - - - - - - si:dkey-222h21.4
79. si:dkeyp-106c3.1 ENSDARG00000090623 225 1 - 1.000 - - - - - - - si:dkeyp-106c3.1 [Source:ZFIN;Acc:ZDB-GENE-050411-73]
80. si:ch211-199m9.2 si:ch211-199m9.2 9 1 - 1.000 - - - - - - -
81. im:7141269 ENSDARG00000101756 30 1 - 1.000 - - - - - - - im:7141269 [Source:ZFIN;Acc:ZDB-GENE-041111-134]
82. si:dkey-241f21.7 si:dkey-241f21.7 3 1 - 1.000 - - - - - - -
83. LMTK3 LMTK3 222 1 - 1.000 - - - - - - -
84. gpr27 ENSDARG00000006607 125 1 1.000 - - - - - - - - G protein-coupled receptor 27 [Source:ZFIN;Acc:ZDB-GENE-071022-3]
85. SNORD59 SNORD59 7 1 - 1.000 - - - - - - -
86. tbc1d20 ENSDARG00000032298 1 1 - 1.000 - - - - - - - TBC1 domain family, member 20 [Source:ZFIN;Acc:ZDB-GENE-050626-61]
87. zgc:152698 32 1 - 1.000 - - - - - - - zgc:152698
88. erap2 ENSDARG00000098618 16 1 - 1.000 - - - - - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
89. zgc:66455 ENSDARG00000052375 3 1 - 1.000 - - - - - - - zgc:66455 [Source:ZFIN;Acc:ZDB-GENE-040426-1642]
90. fam219b ENSDARG00000104637 3 1 - 1.000 - - - - - - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
91. PCDH10 PCDH10 7 1 - 1.000 - - - - - - -
92. TMEM57 TMEM57 260 1 - 1.000 - - - - - - -
93. plscr3a ENSDARG00000093078 7 1 - 1.000 - - - - - - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
94. si:dkey-71b5.6 ENSDARG00000098861 12 1 - 1.000 - - - - - - - si:dkey-71b5.6 [Source:NCBI gene;Acc:100294632]
95. zgc:152968 ENSDARG00000037002 6 1 - 1.000 - - - - - - - zgc:152968 [Source:ZFIN;Acc:ZDB-GENE-061013-448]
96. ft1 ENSDARG00000059056 102 1 1.000 - - - - - - - - alpha(1,3)fucosyltransferase gene 1 [Source:ZFIN;Acc:ZDB-GENE-990715-17]
97. CLDN18 ENSDARG00000103087 2 1 - - - - 1.000 - - - - claudin 18 [Source:ZFIN;Acc:ZDB-GENE-130530-867]
98. sowahca ENSDARG00000098790 1 1 - 1.000 - - - - - - - sosondowah ankyrin repeat domain family Ca [Source:ZFIN;Acc:ZDB-GENE-081104-106]
99. si:dkey-6n3.3 si:dkey-6n3.3 9 1 - - - - 1.000 - - - -
100. klc4 ENSDARG00000086985 4 1 - 1.000 - - - - - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]

There are 792 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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