Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RPGR

Gene Name Gene ID Reads Annotation
RPGR ENSGALG00000036284 186 retinitis pigmentosa GTPase regulator [Source:HGNC Symbol;Acc:HGNC:10295]











Genes with expression patterns similar to RPGR

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RPGR ENSGALG00000036284 186 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 retinitis pigmentosa GTPase regulator [Source:HGNC Symbol;Acc:HGNC:10295]
2. UBE3C ENSGALG00000006461 57 1.807 - - - - - 0.858 - - - 0.949 ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
3. PTPRE ENSGALG00000009823 250 1.709 - - 0.771 - - - - - - 0.938 protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
4. TYSND1 ENSGALG00000033807 716 1.67 - - 0.733 - - - - - - 0.937 trypsin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28531]
5. ADAMTS12 55 1.667 - - 0.722 - - - - - - 0.945 ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
6. BCOR ENSGALG00000016245 85 1.663 - - - - - 0.722 - - - 0.941 BCL6 corepressor, transcript variant X8
7. RPL3L ENSGALG00000005458 9 1.606 - - - - - 0.807 - 0.799 - - ribosomal protein L3 like [Source:NCBI gene;Acc:416542]
8. PARK2 166 1.584 - - 0.829 - - - 0.755 - - - parkin RBR E3 ubiquitin protein ligase
9. CCDC40 ENSGALG00000007042 596 1.483 - - 0.744 - - 0.739 - - - - coiled-coil domain containing 40 [Source:HGNC Symbol;Acc:HGNC:26090]
10. LOC420992 ENSGALG00000013430 126 1.408 - - 0.707 - - - 0.701 - - - LOC420992, transcript variant X6
11. RINT1 ENSGALG00000008123 1064 1.406 - - 0.701 - - 0.705 - - - - RAD50 interactor 1 [Source:NCBI gene;Acc:427848]
12. CTK-1 CTK-1 1618 0.959 - - - - - - - - - 0.959
13. PRICKLE1 ENSGALG00000009556 60 0.955 - - - - - - - - - 0.955 prickle planar cell polarity protein 1 [Source:HGNC Symbol;Acc:HGNC:17019]
14. CCBL2 CCBL2 184 0.953 - - - - - - - - - 0.953
15. GRPEL2 ENSGALG00000002673 105 0.953 - - - - - - - - - 0.953 GrpE like 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21060]
16. SLC38A1 ENSGALG00000009698 566 0.952 - - - - - - - - - 0.952 solute carrier family 38 member 1 [Source:NCBI gene;Acc:417806]
17. ATP2B2 ENSGALG00000030908 584 0.951 - - - - - - - - - 0.951 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
18. CNKSR3 ENSGALG00000027159 41 0.95 - - - - - - - - - 0.950 CNKSR family member 3, transcript variant X2
19. AGMO ENSGALG00000010792 76 0.949 - - - - - - - - - 0.949 alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
20. TM6SF2 ENSGALG00000029015 109 0.949 - - - - - - - - - 0.949 transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
21. ENSGALG00000004772 ENSGALG00000004772 173 0.949 - - - - - - - - - 0.949
22. ENSGALG00000008594 ENSGALG00000008594 54 0.949 - - - - - - - - - 0.949
23. TRIM24 ENSGALG00000012823 2725 0.949 - - - - - - - - - 0.949 tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
24. SHPK ENSGALG00000004637 2386 0.948 - - - - - - - - - 0.948 sedoheptulokinase, transcript variant X1
25. SOS2 ENSGALG00000012273 41 0.948 - - - - - - - - - 0.948 SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
26. SERPINB6 ENSGALG00000012866 1582 0.948 - - - - - - - - - 0.948 serpin family B member 6 [Source:NCBI gene;Acc:420895]
27. MAP3K8 ENSGALG00000007356 188 0.947 - - - - - - - - - 0.947 mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
28. PROCR ENSGALG00000006547 645 0.946 - - - - - - - - - 0.946 protein C receptor [Source:NCBI gene;Acc:424867]
29. ENSGALG00000018358 ENSGALG00000018358 101 0.945 - - - - - - - - - 0.945
30. TRIM3 ENSGALG00000034004 110 0.945 - - - - - - - - - 0.945 tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
31. NHLRC2 ENSGALG00000008946 387 0.945 - - - - - - - - - 0.945 NHL repeat containing 2 [Source:NCBI gene;Acc:423903]
32. ENSGALG00000027621 ENSGALG00000027621 863 0.945 - - - - - - - - - 0.945
33. RGP1 ENSGALG00000002394 5937 0.943 - - - - - - - - - 0.943 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
34. RASSF8 ENSGALG00000014041 850 0.943 - - - - - - - - - 0.943 Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
35. TTI1 ENSGALG00000006791 1218 0.942 - - - - - - - - - 0.942 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
36. NBN ENSGALG00000037686 648 0.942 - - - - - - - - - 0.942 nibrin [Source:NCBI gene;Acc:374246]
37. TGFB3 ENSGALG00000010346 3118 0.942 - - - - - - - - - 0.942 transforming growth factor beta 3 [Source:NCBI gene;Acc:396438]
38. DTX2 ENSGALG00000001905 1475 0.94 - - - - - - - - - 0.940 deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
39. FN3K ENSGALG00000001531 208 0.94 - - - - - - - - - 0.940 fructosamine 3 kinase [Source:HGNC Symbol;Acc:HGNC:24822]
40. RP9 ENSGALG00000035453 1186 0.94 - - - - - - - - - 0.940 retinitis pigmentosa 9 (autosomal dominant)
41. ENSGALG00000004643 ENSGALG00000004643 2297 0.94 - - - - - - - - - 0.940
42. ZFPM2 ENSGALG00000040079 942 0.939 - - - - - - - - - 0.939 zinc finger protein, FOG family member 2 [Source:HGNC Symbol;Acc:HGNC:16700]
43. ENSGALG00000001919 ENSGALG00000001919 531 0.939 - - - - - - - - - 0.939
44. STX6 3297 0.938 - - - - - - - - - 0.938 syntaxin 6
45. EEA1 ENSGALG00000011280 923 0.938 - - - - - - - - - 0.938 early endosome antigen 1 [Source:HGNC Symbol;Acc:HGNC:3185]
46. ZNF142 ENSGALG00000011393 2078 0.938 - - - - - - - - - 0.938 zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
47. TFG ENSGALG00000015299 849 0.938 - - - - - - - - - 0.938 TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
48. GPR114 GPR114 46 0.938 - - - - - - - - - 0.938
49. VAV2 ENSGALG00000002699 503 0.937 - - - - - - - - - 0.937 vav guanine nucleotide exchange factor 2 [Source:NCBI gene;Acc:373938]
50. MAP3K3 ENSGALG00000000525 115 0.937 - - - - - - - - - 0.937 mitogen-activated protein kinase kinase kinase 3 [Source:HGNC Symbol;Acc:HGNC:6855]
51. CENPJ ENSGALG00000017148 1415 0.936 - - - - - - - - - 0.936 centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
52. PDCD7 ENSGALG00000021027 3807 0.935 - - - - - - - - - 0.935 programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
53. TMEM199 ENSGALG00000023757 10781 0.935 - - - - - - - - - 0.935 transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
54. NFKBIE ENSGALG00000044525 633 0.933 - - - - - - - - - 0.933 NFKB inhibitor epsilon [Source:HGNC Symbol;Acc:HGNC:7799]
55. C5orf24 ENSGALG00000006371 1573 0.931 - - - - - - - - - 0.931 chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:HGNC:26746]
56. FOXP1 127 0.93 - - - - - - - - - 0.930 forkhead box P1, transcript variant X14
57. USP36 ENSGALG00000037018 783 0.929 - - - - - - - - - 0.929 ubiquitin specific peptidase 36 [Source:HGNC Symbol;Acc:HGNC:20062]
58. RPRD2 ENSGALG00000014656 939 0.928 - - - - - - - - - 0.928 regulation of nuclear pre-mRNA domain containing 2 [Source:NCBI gene;Acc:425074]
59. ELL2 ENSGALG00000014678 1111 0.927 - - - - - - - - - 0.927 elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
60. MRPS5 ENSGALG00000008550 1707 0.927 - - - - - - - - - 0.927 mitochondrial ribosomal protein S5 [Source:NCBI gene;Acc:416706]
61. PCMTD2 ENSGALG00000005901 1833 0.927 - - - - - - - - - 0.927 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
62. TRIP4 ENSGALG00000030672 1255 0.926 - - - - - - - - - 0.926 thyroid hormone receptor interactor 4 [Source:HGNC Symbol;Acc:HGNC:12310]
63. COQ6 ENSGALG00000010197 3283 0.926 - - - - - - - - - 0.926 coenzyme Q6, monooxygenase [Source:HGNC Symbol;Acc:HGNC:20233]
64. MITF ENSGALG00000039583 865 0.926 - - - - - - - - - 0.926 melanogenesis associated transcription factor [Source:NCBI gene;Acc:395886]
65. ACOX1 ENSGALG00000002159 2953 0.926 - - - - - - - - - 0.926 acyl-CoA oxidase 1 [Source:NCBI gene;Acc:417366]
66. PIGW ENSGALG00000023554 951 0.926 - - - - - - - - - 0.926 phosphatidylinositol glycan anchor biosynthesis class W [Source:HGNC Symbol;Acc:HGNC:23213]
67. LUZP1 ENSGALG00000025858 947 0.925 - - - - - - - - - 0.925 leucine zipper protein 1 [Source:HGNC Symbol;Acc:HGNC:14985]
68. RAB34 ENSGALG00000026315 1193 0.925 - - - - - - - - - 0.925 RAB34, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16519]
69. SUPV3L1 ENSGALG00000004197 4141 0.925 - - - - - - - - - 0.925 Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
70. EDEM2 ENSGALG00000003128 3338 0.924 - - - - - - - - - 0.924 ER degradation enhancing alpha-mannosidase like protein 2 [Source:HGNC Symbol;Acc:HGNC:15877]
71. PDCD4 ENSGALG00000008700 574 0.924 - - - - - - - - - 0.924 programmed cell death 4 [Source:NCBI gene;Acc:374191]
72. TNFRSF21 ENSGALG00000016719 2762 0.924 - - - - - - - - - 0.924 TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
73. VOPP1 ENSGALG00000042773 771 0.924 - - - - - - - - - 0.924 VOPP1, WBP1/VOPP1 family member [Source:HGNC Symbol;Acc:HGNC:34518]
74. TRMT44 ENSGALG00000015594 1490 0.923 - - - - - - - - - 0.923 tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
75. CKI CKI 2845 0.922 - - - - - - - - - 0.922
76. RFWD3 2315 0.922 - - - - - - - - - 0.922 ring finger and WD repeat domain 3
77. SOSTDC1 ENSGALG00000036836 1081 0.922 - - - - - - - - - 0.922 sclerostin domain containing 1 [Source:NCBI gene;Acc:378800]
78. CEP57 ENSGALG00000017201 524 0.922 - - - - - - - - - 0.922 centrosomal protein 57 [Source:HGNC Symbol;Acc:HGNC:30794]
79. MASP1 ENSGALG00000007419 141 0.92 - - - - - - - - - 0.920 mannan binding lectin serine peptidase 1 [Source:NCBI gene;Acc:407088]
80. DUSP23 1663 0.92 - - - - - - - - - 0.920 dual specificity phosphatase 23, transcript variant X1
81. IFNAR2 ENSGALG00000041867 1596 0.919 - - - - - - - - - 0.919 interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
82. PRKAB2 ENSGALG00000001678 1999 0.917 - - - - - - - - - 0.917 protein kinase AMP-activated non-catalytic subunit beta 2 [Source:NCBI gene;Acc:427017]
83. PERP PERP 734 0.917 - - - - - - - - - 0.917
84. ENSGALG00000008157 ENSGALG00000008157 94 0.917 - - - - - - - 0.917 - -
85. PMVK ENSGALG00000046656 645 0.916 - - - - - - - - - 0.916 phosphomevalonate kinase [Source:HGNC Symbol;Acc:HGNC:9141]
86. EP3 EP3 741 0.915 - - - - - - - - - 0.915
87. CTCF 10811 0.915 - - - - - - - - - 0.915 CCCTC-binding factor, transcript variant X2
88. RNF220 ENSGALG00000010109 3114 0.914 - - - - - - - - - 0.914 ring finger protein 220 [Source:NCBI gene;Acc:424580]
89. BZFP1 ENSGALG00000027546 632 0.913 - - - - - - - - - 0.913 B-locus zinc finger protein 1 [Source:NCBI gene;Acc:396247]
90. OBFC1 OBFC1 1071 0.913 - - - - - - - - - 0.913
91. TTC3 ENSGALG00000016050 4115 0.912 - - - - - - - - - 0.912 tetratricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:12393]
92. PKDCCB ENSGALG00000011166 74 0.912 - - - - - - - - - 0.912 protein kinase domain containing, cytoplasmic b
93. HEATR5A 1233 0.911 - - - - - - - - - 0.911 HEAT repeat containing 5A, transcript variant X7
94. STAT5 STAT5 1796 0.909 - - - - - - - - - 0.909
95. DGKB ENSGALG00000033561 170 0.909 - - - - - - - - - 0.909 diacylglycerol kinase beta [Source:HGNC Symbol;Acc:HGNC:2850]
96. AHSA2 1504 0.907 - - - - - - - - - 0.907 AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
97. COL12A1 ENSGALG00000015908 1300 0.907 - - - - - - - - - 0.907 collagen type XII alpha 1 chain [Source:NCBI gene;Acc:395875]
98. AP3B2 2331 0.907 - - - - - - - - - 0.907 adaptor related protein complex 3 beta 2 subunit, transcript variant X7
99. PRR11 2624 0.907 - - - - - - - - - 0.907 proline rich 11, transcript variant X8
100. FBXL2 ENSGALG00000030175 157 0.907 - - - - - - - - - 0.907 F-box and leucine rich repeat protein 2 [Source:HGNC Symbol;Acc:HGNC:13598]

There are 502 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA