Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RPE65

Gene Name Gene ID Reads Annotation
RPE65 ENSGALG00000011259 51 RPE65, retinoid isomerohydrolase [Source:NCBI gene;Acc:395700]











Genes with expression patterns similar to RPE65

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RPE65 ENSGALG00000011259 51 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 RPE65, retinoid isomerohydrolase [Source:NCBI gene;Acc:395700]
2. MAP3K19 ENSGALG00000028457 17 1.719 - - - - - 0.772 0.947 - - - mitogen-activated protein kinase kinase kinase 19 [Source:HGNC Symbol;Acc:HGNC:26249]
3. ELAVL2 ENSGALG00000015799 585 1.576 - - - - - - 0.798 0.778 - - ELAV like RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:3313]
4. HN1L HN1L 247 0.95 - - - - - - 0.950 - - -
5. SYT8 ENSGALG00000006602 369 0.949 - - - - - - 0.949 - - - synaptotagmin 8 [Source:HGNC Symbol;Acc:HGNC:19264]
6. CHST9 ENSGALG00000019489 21 0.947 - - - - - - 0.947 - - - carbohydrate sulfotransferase 9 [Source:HGNC Symbol;Acc:HGNC:19898]
7. FAM46C 13 0.947 - - - - - - 0.947 - - - family with sequence similarity 46 member C
8. MBL2 ENSGALG00000002507 17 0.947 - - - - - - 0.947 - - - mannose binding lectin 2 [Source:NCBI gene;Acc:374267]
9. CBLN1 ENSGALG00000042664 15 0.947 - - - - - - 0.947 - - - cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
10. PANX1 ENSGALG00000039751 70 0.943 - - - - - - 0.943 - - - pannexin 1 [Source:HGNC Symbol;Acc:HGNC:8599]
11. EFCAB7 ENSGALG00000010998 13 0.941 - - - - - - 0.941 - - - EF-hand calcium binding domain 7 [Source:HGNC Symbol;Acc:HGNC:29379]
12. KIAA1244 KIAA1244 62 0.94 - - - - - - 0.940 - - -
13. PTPN21 ENSGALG00000010616 129 0.939 - - - - - - 0.939 - - - protein tyrosine phosphatase, non-receptor type 21 [Source:HGNC Symbol;Acc:HGNC:9651]
14. ADAP2 ENSGALG00000003319 134 0.937 - - - - - - 0.937 - - - ArfGAP with dual PH domains 2 [Source:HGNC Symbol;Acc:HGNC:16487]
15. SCTR ENSGALG00000012106 49 0.936 - - - - - - 0.936 - - - secretin receptor [Source:NCBI gene;Acc:770943]
16. MTOR ENSGALG00000003339 328 0.933 - - - - - - 0.933 - - - mechanistic target of rapamycin kinase [Source:HGNC Symbol;Acc:HGNC:3942]
17. SLC16A14 ENSGALG00000002897 157 0.933 - - - - - - 0.933 - - - solute carrier family 16 member 14 [Source:HGNC Symbol;Acc:HGNC:26417]
18. FOXRED1 ENSGALG00000046347 4176 0.932 - - - - - - 0.932 - - - FAD dependent oxidoreductase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26927]
19. RNF170 ENSGALG00000015386 296 0.93 - - - - - - 0.930 - - - ring finger protein 170 [Source:NCBI gene;Acc:427296]
20. CXADR ENSGALG00000015701 96 0.927 - - - - - - 0.927 - - - coxsackie virus and adenovirus receptor, transcript variant X2
21. PLEKHS1 ENSGALG00000020679 161 0.926 - - - - - - 0.926 - - - pleckstrin homology domain containing S1 [Source:HGNC Symbol;Acc:HGNC:26285]
22. LOC769139 ENSGALG00000026754 753 0.921 - - - - - - 0.921 - - - feather keratin 1-like, transcript variant X2
23. CAT-1 CAT-1 115 0.921 - - - - - - 0.921 - - -
24. P2RY12 ENSGALG00000036470 20 0.92 - - 0.920 - - - - - - - purinergic receptor P2Y12 [Source:HGNC Symbol;Acc:HGNC:18124]
25. ARHGAP12 ENSGALG00000007254 479 0.919 - - - - - - 0.919 - - - Rho GTPase activating protein 12 [Source:HGNC Symbol;Acc:HGNC:16348]
26. SLC2A9 ENSGALG00000014971 751 0.919 - - - - - - 0.919 - - - solute carrier family 2 member 9 [Source:HGNC Symbol;Acc:HGNC:13446]
27. LOC112532477 ENSGALG00000027520 40 0.911 - - - - - - 0.911 - - - fibrinogen-like protein 1-like protein
28. CPXM2 ENSGALG00000009693 23 0.91 - - - 0.910 - - - - - - carboxypeptidase X, M14 family member 2 [Source:HGNC Symbol;Acc:HGNC:26977]
29. TAP1 ENSGALG00000035075 54 0.905 - - - - - - 0.905 - - - transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [Source:NCBI gene;Acc:427727]
30. PLK4 ENSGALG00000010195 514 0.903 - - - - - - 0.903 - - - polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]
31. NCOA5 ENSGALG00000007009 299 0.902 - - - - - - 0.902 - - - nuclear receptor coactivator 5 [Source:HGNC Symbol;Acc:HGNC:15909]
32. GRID1 ENSGALG00000037366 159 0.899 - - - - - - 0.899 - - - glutamate ionotropic receptor delta type subunit 1 [Source:HGNC Symbol;Acc:HGNC:4575]
33. LYRM1 ENSGALG00000002273 1523 0.898 - - - - - - 0.898 - - - LYR motif containing 1 [Source:NCBI gene;Acc:427003]
34. WDR35 157 0.898 - - - - - - 0.898 - - - WD repeat domain 35, transcript variant X1
35. TP73 ENSGALG00000001006 335 0.897 - - - - - - 0.897 - - - tumor protein p73 [Source:HGNC Symbol;Acc:HGNC:12003]
36. AFG3L2 ENSGALG00000013853 1138 0.895 - - - - - - 0.895 - - - AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
37. VWDE ENSGALG00000042443 160 0.892 - - - - - - 0.892 - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
38. AAGAB ENSGALG00000007887 142 0.891 - - - - - - 0.891 - - - alpha- and gamma-adaptin binding protein [Source:NCBI gene;Acc:415553]
39. ASH1L ENSGALG00000014638 803 0.889 - - - - - - 0.889 - - - ASH1 like histone lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:19088]
40. MOK ENSGALG00000011366 85 0.889 - - - - - - - 0.889 - - MOK protein kinase [Source:HGNC Symbol;Acc:HGNC:9833]
41. FAM69A ENSGALG00000005918 157 0.888 - - - - - - 0.888 - - - family with sequence similarity 69 member A, transcript variant X4
42. ANO6 ENSGALG00000009638 470 0.886 - - - - - - 0.886 - - - anoctamin 6 [Source:HGNC Symbol;Acc:HGNC:25240]
43. DNAH5 ENSGALG00000012997 28 0.884 - - - - - - - 0.884 - - dynein axonemal heavy chain 5 [Source:HGNC Symbol;Acc:HGNC:2950]
44. IQCH ENSGALG00000007909 128 0.884 - - - - - - 0.884 - - - IQ motif containing H [Source:HGNC Symbol;Acc:HGNC:25721]
45. TFB1M ENSGALG00000013647 84 0.884 - - - - - - 0.884 - - - transcription factor B1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:17037]
46. C8orf34 ENSGALG00000034561 286 0.882 - - - - - - 0.882 - - - chromosome 8 open reading frame 34 [Source:HGNC Symbol;Acc:HGNC:30905]
47. GANC ENSGALG00000009036 731 0.879 - - - - - - 0.879 - - - glucosidase alpha, neutral C [Source:NCBI gene;Acc:423232]
48. LOC419074 ENSGALG00000017336 1885 0.874 - - - - - - 0.874 - - - F-box/WD repeat-containing protein 7-like, transcript variant X3
49. KCNK2 ENSGALG00000009687 1552 0.871 - - - - - - 0.871 - - - potassium two pore domain channel subfamily K member 2 [Source:HGNC Symbol;Acc:HGNC:6277]
50. GGT7 ENSGALG00000001062 476 0.871 - - - - - - 0.871 - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
51. LGI2 ENSGALG00000043283 433 0.871 - - - - - - 0.871 - - - leucine rich repeat LGI family member 2 [Source:NCBI gene;Acc:422809]
52. TDRP ENSGALG00000016356 36 0.87 - - - - - - - 0.870 - - testis development related protein [Source:HGNC Symbol;Acc:HGNC:26951]
53. SYCP1 ENSGALG00000002511 13 0.87 - - - - - - - 0.870 - - synaptonemal complex protein 1 [Source:HGNC Symbol;Acc:HGNC:11487]
54. UNC93B1 ENSGALG00000039347 342 0.865 - - - 0.865 - - - - - - unc-93 homolog B1 (C. elegans), transcript variant X6
55. ZFYVE16 ENSGALG00000015576 287 0.864 - - - - - - 0.864 - - - zinc finger FYVE-type containing 16, transcript variant X3
56. SERPINB6 ENSGALG00000012866 1582 0.864 - - - - - - 0.864 - - - serpin family B member 6 [Source:NCBI gene;Acc:420895]
57. RAB22A ENSGALG00000007554 201 0.861 - - - - - - 0.861 - - - RAB22A, member RAS oncogene family [Source:NCBI gene;Acc:419318]
58. USP42 ENSGALG00000003378 1392 0.858 - - - - - - 0.858 - - - ubiquitin specific peptidase 42 [Source:HGNC Symbol;Acc:HGNC:20068]
59. BMPER ENSGALG00000029811 636 0.858 - - - - - - - 0.858 - - BMP binding endothelial regulator [Source:NCBI gene;Acc:420744]
60. KCNK4 ENSGALG00000012021 200 0.858 - - - - - - - 0.858 - - potassium channel, subfamily K, member 4, transcript variant X3
61. WSCD1 ENSGALG00000005886 539 0.857 - - - - - - 0.857 - - - WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
62. CEP112 ENSGALG00000034989 123 0.856 - - - - - - 0.856 - - - centrosomal protein 112 [Source:NCBI gene;Acc:101749632]
63. TNFRSF1A ENSGALG00000039461 1569 0.852 - - - - - - 0.852 - - - TNF receptor superfamily member 1A [Source:NCBI gene;Acc:418325]
64. DUSP10 ENSGALG00000009450 1041 0.85 - - - - - - 0.850 - - - dual specificity phosphatase 10 [Source:NCBI gene;Acc:421340]
65. PPP2R3A ENSGALG00000034512 1091 0.849 - - - - - - 0.849 - - - protein phosphatase 2 regulatory subunit B''alpha [Source:HGNC Symbol;Acc:HGNC:9307]
66. C12H3ORF19 C12H3ORF19 1278 0.848 - - - - - - 0.848 - - -
67. CCDC173 358 0.848 - - - - - - 0.848 - - - coiled-coil domain containing 173
68. FANCA ENSGALG00000000516 250 0.846 - - - - - - 0.846 - - - Fanconi anemia complementation group A [Source:NCBI gene;Acc:415854]
69. AADAT ENSGALG00000009655 1692 0.846 - - - - - - 0.846 - - - aminoadipate aminotransferase [Source:HGNC Symbol;Acc:HGNC:17929]
70. PLXDC2 ENSGALG00000007956 238 0.845 - - - - - - - 0.845 - - plexin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21013]
71. ENSGALG00000023314 ENSGALG00000023314 6331 0.844 - - - - - - 0.844 - - -
72. RASA1 ENSGALG00000017706 224 0.84 - - - - - - 0.840 - - - RAS p21 protein activator 1
73. SMAD3 ENSGALG00000035701 161 0.84 - - - - - - 0.840 - - - SMAD family member 3 [Source:NCBI gene;Acc:395132]
74. FOXRED2 ENSGALG00000012530 36 0.837 - - - - - - - 0.837 - - FAD dependent oxidoreductase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26264]
75. CENPT ENSGALG00000028900 674 0.836 - - - - - - 0.836 - - - centromere protein T [Source:NCBI gene;Acc:415654]
76. ACBD7 ENSGALG00000019663 2328 0.836 - - - - - - 0.836 - - - acyl-CoA binding domain containing 7 [Source:HGNC Symbol;Acc:HGNC:17715]
77. PCDH11X ENSGALG00000006851 314 0.835 - - - - - - 0.835 - - - protocadherin 11 X-linked, transcript variant X1
78. TMEM65 ENSGALG00000037371 776 0.834 - - - - - - 0.834 - - - transmembrane protein 65 [Source:NCBI gene;Acc:428387]
79. HSPA13 ENSGALG00000019201 712 0.833 - - - - - - 0.833 - - - heat shock protein family A (Hsp70) member 13 [Source:NCBI gene;Acc:418469]
80. TTC12 1384 0.831 - - - - - - 0.831 - - - tetratricopeptide repeat domain 12, transcript variant X4
81. ANAPC7 ENSGALG00000003826 5484 0.828 - - - - - - 0.828 - - - anaphase promoting complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:17380]
82. KLF4 ENSGALG00000026928 184 0.827 - - - - - - 0.827 - - - Kruppel like factor 4 [Source:HGNC Symbol;Acc:HGNC:6348]
83. ENKUR ENSGALG00000007680 637 0.827 - - - - - - 0.827 - - - enkurin, TRPC channel interacting protein [Source:HGNC Symbol;Acc:HGNC:28388]
84. FRG1 ENSGALG00000013590 2590 0.826 - - - - - - 0.826 - - - FSHD region gene 1
85. ENSGALG00000004703 ENSGALG00000004703 112 0.822 - - - - - - 0.822 - - -
86. LEF-1 LEF-1 411 0.822 - - - - - - 0.822 - - -
87. MYO1C ENSGALG00000002709 57 0.822 - - - - - 0.822 - - - - myosin IC [Source:NCBI gene;Acc:417555]
88. SNX10 ENSGALG00000011046 333 0.821 - - - - - - 0.821 - - - sorting nexin 10 [Source:NCBI gene;Acc:420628]
89. SNAP47 ENSGALG00000005412 1487 0.821 - - - - - - 0.821 - - - synaptosome associated protein 47 [Source:HGNC Symbol;Acc:HGNC:30669]
90. ENSGALG00000020884 ENSGALG00000020884 22 0.82 - - - - - 0.820 - - - -
91. NPDC1 ENSGALG00000042635 12 0.82 - - - - - 0.820 - - - - neural proliferation, differentiation and control 1 [Source:HGNC Symbol;Acc:HGNC:7899]
92. PIBF1 ENSGALG00000016929 593 0.819 - - - - - - 0.819 - - - progesterone immunomodulatory binding factor 1 [Source:HGNC Symbol;Acc:HGNC:23352]
93. SEC14L5 ENSGALG00000045758 25 0.819 - - - - - 0.819 - - - - SEC14 like lipid binding 5 [Source:HGNC Symbol;Acc:HGNC:29032]
94. NPAS2 ENSGALG00000016774 48 0.816 - - - - - 0.816 - - - - neuronal PAS domain protein 2 [Source:NCBI gene;Acc:395433]
95. CELF2 ENSGALG00000034590 31 0.816 - - - - - - - 0.816 - - CUGBP Elav-like family member 2 [Source:NCBI gene;Acc:374111]
96. SLC39A6 ENSGALG00000013209 1754 0.815 - - - - - - 0.815 - - - solute carrier family 39 member 6 [Source:HGNC Symbol;Acc:HGNC:18607]
97. TTC38 ENSGALG00000014551 1135 0.814 - - - - - - 0.814 - - - tetratricopeptide repeat domain 38 [Source:HGNC Symbol;Acc:HGNC:26082]
98. CPN2 ENSGALG00000045776 18 0.813 - - - - - - - - - 0.813 carboxypeptidase N subunit 2
99. H2A-VII ENSGALG00000027113, ENSGALG00000027315, ENSGALG00000028372, ENSGALG00000029941, ENSGALG00000031571, ENSGALG00000032645, ENSGALG00000035715 823 0.812 - - - - - - 0.812 - - - histone cluster 1, H2A-IV-like 4 [Source:NCBI gene;Acc:427895]
100. FSHR ENSGALG00000009100 18 0.811 - - - - - 0.811 - - - - follicle stimulating hormone receptor [Source:NCBI gene;Acc:395962]

There are 306 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA