Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RPAP3

Gene Name Gene ID Reads Annotation
RPAP3 ENSGALG00000009743 3380 RNA polymerase II associated protein 3 [Source:NCBI gene;Acc:417811]











Genes with expression patterns similar to RPAP3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RPAP3 ENSGALG00000009743 3380 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA polymerase II associated protein 3 [Source:NCBI gene;Acc:417811]
2. TTC37 ENSGALG00000014670 5715 1.751 - - - - 0.961 - 0.790 - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
3. EXOSC3 ENSGALG00000002426 7255 1.72 - - - - 0.973 - 0.747 - - - exosome component 3 [Source:NCBI gene;Acc:423626]
4. ZNF318 ENSGALG00000034040 1758 1.713 - - - - 0.988 - - - 0.725 - zinc finger protein 318 [Source:HGNC Symbol;Acc:HGNC:13578]
5. TMEM184C ENSGALG00000010019 7856 1.711 - - - - 0.983 - 0.728 - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
6. PLA2G12A ENSGALG00000012185 5261 1.708 - - - - 0.965 - 0.743 - - - phospholipase A2 group XIIA [Source:HGNC Symbol;Acc:HGNC:18554]
7. ZWILCH ENSGALG00000007736 4939 1.69 - - - - 0.963 - - 0.727 - - zwilch kinetochore protein [Source:HGNC Symbol;Acc:HGNC:25468]
8. CYB5R2 ENSGALG00000032372 7967 1.69 - - - - 0.944 - 0.746 - - - cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
9. MKKS ENSGALG00000009013 9301 1.683 - - - - 0.961 - - 0.722 - - McKusick-Kaufman syndrome [Source:NCBI gene;Acc:416737]
10. COG6 ENSGALG00000017035 2777 1.681 - - - - 0.977 - 0.704 - - - component of oligomeric golgi complex 6 [Source:HGNC Symbol;Acc:HGNC:18621]
11. ENSGALG00000009771 ENSGALG00000009771 10273 1.61 - - - - 0.854 - 0.756 - - -
12. ILF2 ENSGALG00000011570 23050 1.592 - - - - 0.851 - 0.741 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
13. EXOC2 ENSGALG00000012837 4914 1.551 - - - - - - 0.771 0.780 - - exocyst complex component 2 [Source:NCBI gene;Acc:420889]
14. RNF111 ENSGALG00000004171 2696 1.527 - - - - - - - 0.760 0.767 - ring finger protein 111 [Source:NCBI gene;Acc:374021]
15. HMGB3 ENSGALG00000009071 12011 1.495 - - - - - - 0.711 0.784 - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
16. MRPL38 ENSGALG00000002194 6648 1.475 - - - - - - 0.748 - 0.727 - mitochondrial ribosomal protein L38 [Source:NCBI gene;Acc:770172]
17. FKBP12 FKBP12 64317 1.46 - - - - 0.724 - 0.736 - - -
18. PREP ENSGALG00000015405 17050 1.434 - - - - - - 0.705 - - 0.729 prolyl endopeptidase [Source:NCBI gene;Acc:421785]
19. RAB23 ENSGALG00000016279 597 0.989 - - - - 0.989 - - - - - ras-related protein Rab-23 [Source:NCBI gene;Acc:421879]
20. DNAJA1 ENSGALG00000023066 3820 0.988 - - - - 0.988 - - - - - DnaJ heat shock protein family (Hsp40) member A1 [Source:NCBI gene;Acc:427376]
21. FANCM ENSGALG00000031182 1030 0.988 - - - - 0.988 - - - - - FA complementation group M [Source:HGNC Symbol;Acc:HGNC:23168]
22. DRD2 ENSGALG00000007794 399 0.988 - - - - 0.988 - - - - - dopamine receptor D2 [Source:NCBI gene;Acc:428252]
23. IFT172 ENSGALG00000016509 1226 0.988 - - - - 0.988 - - - - - intraflagellar transport 172 [Source:HGNC Symbol;Acc:HGNC:30391]
24. LOC770492 ENSGALG00000027778 695 0.988 - - - - 0.988 - - - - - ras-related and estrogen-regulated growth inhibitor-like
25. VCPKMT ENSGALG00000012269 2107 0.988 - - - - 0.988 - - - - - valosin containing protein lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:20352]
26. DAP3 ENSGALG00000019796 13278 0.988 - - - - 0.988 - - - - - death associated protein 3 [Source:HGNC Symbol;Acc:HGNC:2673]
27. RNF207 2949 0.987 - - - - 0.987 - - - - - ring finger protein 207, transcript variant X1
28. TMEM203 ENSGALG00000008925 3033 0.987 - - - - 0.987 - - - - - transmembrane protein 203 [Source:HGNC Symbol;Acc:HGNC:28217]
29. ADPGK ENSGALG00000001788 208 0.987 - - - - 0.987 - - - - - ADP dependent glucokinase [Source:NCBI gene;Acc:415317]
30. COQ3 ENSGALG00000015486 3508 0.987 - - - - 0.987 - - - - - coenzyme Q3, methyltransferase [Source:HGNC Symbol;Acc:HGNC:18175]
31. AP1S3 ENSGALG00000005171 2981 0.986 - - - - 0.986 - - - - - adaptor related protein complex 1 subunit sigma 3 [Source:NCBI gene;Acc:424807]
32. ERICH1 ENSGALG00000031021 1495 0.986 - - - - 0.986 - - - - - glutamate rich 1 [Source:NCBI gene;Acc:421904]
33. TCERG1L ENSGALG00000010470 490 0.986 - - - - 0.986 - - - - - transcription elongation regulator 1 like [Source:HGNC Symbol;Acc:HGNC:23533]
34. PRKCD ENSGALG00000002016 1476 0.986 - - - - 0.986 - - - - - protein kinase C delta [Source:NCBI gene;Acc:415905]
35. TEL TEL 1231 0.986 - - - - 0.986 - - - - -
36. OGFOD3 ENSGALG00000001618 2438 0.986 - - - - 0.986 - - - - - 2-oxoglutarate and iron dependent oxygenase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26174]
37. CALCA CALCA 682 0.986 - - - - 0.986 - - - - -
38. FZD6 ENSGALG00000030626 3336 0.986 - - - - 0.986 - - - - - frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
39. ZBTB8OS ENSGALG00000003517 2436 0.986 - - - - 0.986 - - - - - zinc finger and BTB domain containing 8 opposite strand [Source:HGNC Symbol;Acc:HGNC:24094]
40. KLF3 ENSGALG00000041717 2787 0.985 - - - - 0.985 - - - - - Kruppel like factor 3 [Source:HGNC Symbol;Acc:HGNC:16516]
41. IL4RA IL4RA 1237 0.985 - - - - 0.985 - - - - -
42. Sep-11 Sep-11 2005 0.985 - - - - 0.985 - - - - -
43. BBS2 ENSGALG00000042415 1816 0.984 - - - - 0.984 - - - - - Bardet-Biedl syndrome 2 [Source:NCBI gene;Acc:415694]
44. RASA2 ENSGALG00000002850 2231 0.984 - - - - 0.984 - - - - - RAS p21 protein activator 2 [Source:NCBI gene;Acc:424782]
45. REXO5 ENSGALG00000002239 2466 0.984 - - - - 0.984 - - - - - RNA exonuclease 5 [Source:NCBI gene;Acc:427001]
46. CRCP ENSGALG00000002587 8809 0.984 - - - - 0.984 - - - - - CGRP receptor component [Source:NCBI gene;Acc:396022]
47. SLC25A15 ENSGALG00000017032 6773 0.984 - - - - 0.984 - - - - - solute carrier family 25 member 15 [Source:NCBI gene;Acc:418886]
48. DLGAP5 ENSGALG00000012165 2406 0.984 - - - - 0.984 - - - - - DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]
49. TMEM97 ENSGALG00000005702 2037 0.983 - - - - 0.983 - - - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
50. PDHB ENSGALG00000029576 12254 0.983 - - - - 0.983 - - - - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
51. METTL25 1538 0.983 - - - - 0.983 - - - - - methyltransferase like 25, transcript variant X1
52. ALDH18A1 ENSGALG00000034655 3038 0.983 - - - - 0.983 - - - - - aldehyde dehydrogenase 18 family member A1, transcript variant X13
53. ITPA ENSGALG00000003250 7722 0.982 - - - - 0.982 - - - - - inosine triphosphatase [Source:NCBI gene;Acc:424390]
54. ZZZ3 ENSGALG00000008988 3132 0.982 - - - - 0.982 - - - - - zinc finger ZZ-type containing 3, transcript variant X5
55. SMC6 ENSGALG00000016467 3321 0.981 - - - - 0.981 - - - - - Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]
56. ARPP21 ENSGALG00000043240 2403 0.981 - - - - 0.981 - - - - - cAMP regulated phosphoprotein 21 [Source:HGNC Symbol;Acc:HGNC:16968]
57. TMX4 ENSGALG00000028587 3513 0.981 - - - - 0.981 - - - - - thioredoxin related transmembrane protein 4 [Source:NCBI gene;Acc:416729]
58. DNAJC25 ENSGALG00000015684 4554 0.98 - - - - 0.980 - - - - - DnaJ heat shock protein family (Hsp40) member C25
59. NQO2 ENSGALG00000025747 2287 0.98 - - - - 0.980 - - - - - N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856]
60. CGT CGT 948 0.979 - - - - 0.979 - - - - -
61. ATP5J 14451 0.979 - - - - 0.979 - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6, transcript variant X2
62. TXNDC11 ENSGALG00000003154 2224 0.978 - - - - 0.978 - - - - - thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
63. ATAD5 ENSGALG00000003294 4830 0.978 - - - - 0.978 - - - - - ATPase family, AAA domain containing 5 [Source:NCBI gene;Acc:417408]
64. MICALL1 ENSGALG00000012265 3753 0.978 - - - - 0.978 - - - - - MICAL like 1 [Source:NCBI gene;Acc:418032]
65. KIAA1524 ENSGALG00000015360 3527 0.977 - - - - 0.977 - - - - - KIAA1524 [Source:NCBI gene;Acc:418410]
66. SPSB1 ENSGALG00000002506 2205 0.976 - - - - 0.976 - - - - - splA/ryanodine receptor domain and SOCS box containing 1 [Source:HGNC Symbol;Acc:HGNC:30628]
67. DHX33 ENSGALG00000001630 7783 0.976 - - - - 0.976 - - - - - DEAH-box helicase 33 [Source:HGNC Symbol;Acc:HGNC:16718]
68. ROCK1 ENSGALG00000014922 4020 0.976 - - - - 0.976 - - - - - Rho-associated, coiled-coil containing protein kinase 1 [Source:NCBI gene;Acc:373970]
69. C19orf70 ENSGALG00000026847 19315 0.975 - - - - 0.975 - - - - - chromosome 19 open reading frame 70 [Source:HGNC Symbol;Acc:HGNC:33702]
70. SLC9A3R2 ENSGALG00000005608 4220 0.973 - - - - 0.973 - - - - - SLC9A3 regulator 2 [Source:HGNC Symbol;Acc:HGNC:11076]
71. PEX2 ENSGALG00000035752 4427 0.973 - - - - 0.973 - - - - - peroxisomal biogenesis factor 2 [Source:NCBI gene;Acc:420192]
72. MYBBP1A ENSGALG00000001363 10331 0.973 - - - - 0.973 - - - - - MYB binding protein 1a [Source:HGNC Symbol;Acc:HGNC:7546]
73. GLI2 ENSGALG00000011630 3347 0.972 - - - - 0.972 - - - - - GLI family zinc finger 2 [Source:NCBI gene;Acc:395956]
74. ATPAF1 ENSGALG00000010444 3677 0.97 - - - - 0.970 - - - - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18803]
75. LARP7 ENSGALG00000012048 8393 0.969 - - - - 0.969 - - - - - La ribonucleoprotein domain family member 7 [Source:HGNC Symbol;Acc:HGNC:24912]
76. PLS3 ENSGALG00000005930 12625 0.969 - - - - 0.969 - - - - - plastin 3 [Source:NCBI gene;Acc:422222]
77. TAF13 ENSGALG00000015185 11410 0.969 - - - - 0.969 - - - - - TATA-box binding protein associated factor 13 [Source:NCBI gene;Acc:418365]
78. POLR1B ENSGALG00000032273 3845 0.968 - - - - 0.968 - - - - - RNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]
79. MDFIC ENSGALG00000026838 3881 0.968 - - - - 0.968 - - - - - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
80. SLC25A24 ENSGALG00000001938 3671 0.967 - - - - 0.967 - - - - - solute carrier family 25 member 24 [Source:HGNC Symbol;Acc:HGNC:20662]
81. GALNTL4 GALNTL4 3548 0.967 - - - - 0.967 - - - - -
82. MPRIP ENSGALG00000004798 6700 0.967 - - - - 0.967 - - - - - myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
83. ROR2 ENSGALG00000015208 1323 0.966 - - - - 0.966 - - - - - receptor tyrosine kinase like orphan receptor 2 [Source:NCBI gene;Acc:769516]
84. CCDC58 ENSGALG00000014413 9022 0.966 - - - - 0.966 - - - - - coiled-coil domain containing 58 [Source:NCBI gene;Acc:418269]
85. H2AFY_1 ENSGALG00000040141 4895 0.965 - - - - 0.965 - - - - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
86. HMGN1 ENSGALG00000016067 17375 0.964 - - - - 0.964 - - - - - high mobility group nucleosome binding domain 1 [Source:NCBI gene;Acc:395999]
87. COPG COPG 6949 0.963 - - - - 0.963 - - - - -
88. MAPKAPK2 ENSGALG00000000883 6174 0.963 - - - - 0.963 - - - - - mitogen-activated protein kinase-activated protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:6887]
89. ENSGALG00000004283 ENSGALG00000004283 4771 0.962 - - - - 0.962 - - - - -
90. WWP2 ENSGALG00000000699 5040 0.961 - - - - 0.961 - - - - - WW domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:415868]
91. TIMM10 ENSGALG00000004845 31395 0.961 - - - - 0.961 - - - - - translocase of inner mitochondrial membrane 10 [Source:NCBI gene;Acc:425202]
92. DAP ENSGALG00000013002 6815 0.961 - - - - 0.961 - - - - - death associated protein [Source:NCBI gene;Acc:420923]
93. BRMS1L ENSGALG00000010093 4964 0.96 - - - - 0.960 - - - - - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
94. ROMO1 ENSGALG00000027416 9560 0.959 - - - - 0.959 - - - - - reactive oxygen species modulator 1 [Source:NCBI gene;Acc:768833]
95. PWP1 ENSGALG00000012631 10536 0.959 - - - - 0.959 - - - - - PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
96. THOC1 ENSGALG00000014915 5846 0.958 - - - - 0.958 - - - - - Gallus gallus THO complex 1 (THOC1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001321610]
97. LYN ENSGALG00000042321 3539 0.958 - - - - 0.958 - - - - - LYN proto-oncogene, Src family tyrosine kinase [Source:NCBI gene;Acc:421127]
98. C1H21ORF33 ENSGALG00000019171 8910 0.957 - - - - 0.957 - - - - - chromosome 1 open reading frame, human C21orf33 [Source:NCBI gene;Acc:418552]
99. NDUFA4 ENSGALG00000025999 53323 0.957 - - - - 0.957 - - - - - NDUFA4, mitochondrial complex associated [Source:NCBI gene;Acc:772135]
100. DCAF12 ENSGALG00000005800 6419 0.956 - - - - 0.956 - - - - - DDB1 and CUL4 associated factor 12 [Source:NCBI gene;Acc:427396]

There are 442 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA