Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RPAP1

Gene Name Gene ID Reads Annotation
RPAP1 ENSGALG00000008624 3522 RNA polymerase II associated protein 1 [Source:HGNC Symbol;Acc:HGNC:24567]











Genes with expression patterns similar to RPAP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RPAP1 ENSGALG00000008624 3522 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA polymerase II associated protein 1 [Source:HGNC Symbol;Acc:HGNC:24567]
2. IGF2BP2 ENSGALG00000033195 11421 1.649 - - - - - - 0.718 0.931 - - insulin like growth factor 2 mRNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:28867]
3. H2AFY_1 ENSGALG00000040141 4895 0.993 - - - - - - - 0.993 - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
4. FBXW8 ENSGALG00000008207 1639 0.992 - - - - - - - 0.992 - - F-box and WD repeat domain containing 8 [Source:HGNC Symbol;Acc:HGNC:13597]
5. NAA50 ENSGALG00000033889 3551 0.991 - - - - - - - 0.991 - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:NCBI gene;Acc:418319]
6. PTPN11 ENSGALG00000004821 2658 0.991 - - - - - - - 0.991 - - protein tyrosine phosphatase, non-receptor type 11 [Source:NCBI gene;Acc:395815]
7. RBM6 ENSGALG00000035578 1690 0.991 - - - - - - - 0.991 - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
8. DENND5B 4077 0.991 - - - - - - - 0.991 - - DENN domain containing 5B, transcript variant X1
9. ENSGALG00000026930 ENSGALG00000026930 681 0.99 - - - - - - - 0.990 - -
10. ADARB1 ENSGALG00000007527 2480 0.99 - - - - - - - 0.990 - - adenosine deaminase, RNA specific B1 [Source:NCBI gene;Acc:374087]
11. PRORSD1P ENSGALG00000034854 2924 0.989 - - - - - - - 0.989 - - prolyl-tRNA synthetase associated domain containing 1, pseudogene [Source:NCBI gene;Acc:421212]
12. CMC1 ENSGALG00000025811 3939 0.989 - - - - - - - 0.989 - - C-X9-C motif containing 1
13. VPS13B 2293 0.989 - - - - - - - 0.989 - - vacuolar protein sorting 13 homolog B
14. SNCAIP ENSGALG00000005330 2425 0.989 - - - - - - - 0.989 - - synuclein alpha interacting protein [Source:HGNC Symbol;Acc:HGNC:11139]
15. PGS1 ENSGALG00000007181 3187 0.989 - - - - - - - 0.989 - - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
16. FGFRL1 ENSGALG00000037525 1687 0.989 - - - - - - - 0.989 - - fibroblast growth factor receptor like 1 [Source:NCBI gene;Acc:395107]
17. TECPR2 ENSGALG00000011373 1063 0.989 - - - - - - - 0.989 - - tectonin beta-propeller repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:19957]
18. TMEM100 ENSGALG00000026465 1785 0.988 - - - - - - - 0.988 - - transmembrane protein 100 [Source:HGNC Symbol;Acc:HGNC:25607]
19. EPS15 ENSGALG00000010543 1598 0.988 - - - - - - - 0.988 - - epidermal growth factor receptor pathway substrate 15 [Source:NCBI gene;Acc:424633]
20. ANKRD17 ENSGALG00000011642 3192 0.988 - - - - - - - 0.988 - - ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:23575]
21. MTRF1 ENSGALG00000016951 3983 0.988 - - - - - - - 0.988 - - mitochondrial translation release factor 1 [Source:HGNC Symbol;Acc:HGNC:7469]
22. PAX-6 PAX-6 2650 0.988 - - - - - - - 0.988 - -
23. DOCK8 481 0.988 - - - - - - - 0.988 - - dedicator of cytokinesis 8, transcript variant X1
24. ZMYM4 ENSGALG00000002499 435 0.988 - - - - - - - 0.988 - - zinc finger MYM-type containing 4, transcript variant X1
25. MB21D1 2460 0.987 - - - - - - - 0.987 - - Mab-21 domain containing 1
26. PPT1 ENSGALG00000003936 2540 0.987 - - - - - - - 0.987 - - palmitoyl-protein thioesterase 1 [Source:NCBI gene;Acc:419681]
27. NFASC ENSGALG00000031776 4264 0.987 - - - - - - - 0.987 - - neurofascin [Source:NCBI gene;Acc:419824]
28. RIOK1 ENSGALG00000012795 4658 0.987 - - - - - - - 0.987 - - RIO kinase 1 [Source:HGNC Symbol;Acc:HGNC:18656]
29. EED ENSGALG00000014060 6467 0.985 - - - - - - - 0.985 - - embryonic ectoderm development [Source:NCBI gene;Acc:426381]
30. KIAA1432 KIAA1432 1792 0.985 - - - - - - - 0.985 - -
31. VRK1 ENSGALG00000011116 4524 0.985 - - - - - - - 0.985 - - vaccinia related kinase 1 [Source:NCBI gene;Acc:423443]
32. ADD1 ENSGALG00000015664 6828 0.984 - - - - - - - 0.984 - - adducin 1 [Source:NCBI gene;Acc:422882]
33. FAS ENSGALG00000006351 461 0.984 - - - - - - - 0.984 - - Fas cell surface death receptor [Source:NCBI gene;Acc:395274]
34. gga-mir-1787 ENSGALG00000025542 1373 0.984 - - - - - - - 0.984 - - gga-mir-1787 [Source:miRBase;Acc:MI0007530]
35. KNOP1 ENSGALG00000002042 6251 0.983 - - - - - - - 0.983 - - lysine-rich nucleolar protein 1, transcript variant X1
36. LIN7C ENSGALG00000012170 5043 0.983 - - - - - - - 0.983 - - lin-7 homolog C, crumbs cell polarity complex component [Source:NCBI gene;Acc:421608]
37. C3H2ORF43 C3H2ORF43 5628 0.983 - - - - - - - 0.983 - -
38. DDHD1 ENSGALG00000012426 6068 0.982 - - - - - - - 0.982 - - DDHD domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19714]
39. KCTD9 ENSGALG00000000275 3455 0.98 - - - - - - - 0.980 - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
40. KDM4B ENSGALG00000034592 6711 0.979 - - - - - - - 0.979 - - lysine demethylase 4B, transcript variant X8
41. RHOT1 ENSGALG00000003397 5149 0.979 - - - - - - - 0.979 - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
42. ACAP2 ENSGALG00000007040 4182 0.978 - - - - - - - 0.978 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:NCBI gene;Acc:424895]
43. QARS ENSGALG00000029980 4207 0.974 - - - - - - - 0.974 - - glutaminyl-tRNA synthetase [Source:NCBI gene;Acc:416057]
44. MAK16 ENSGALG00000001663 7455 0.974 - - - - - - - 0.974 - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
45. PACSIN3 ENSGALG00000008231 5423 0.973 - - - - - - - 0.973 - - protein kinase C and casein kinase substrate in neurons 3 [Source:NCBI gene;Acc:423186]
46. MED10 ENSGALG00000028336 9343 0.969 - - - - - - - 0.969 - - mediator complex subunit 10 [Source:HGNC Symbol;Acc:HGNC:28760]
47. OMA1 ENSGALG00000010861 3328 0.968 - - - - - - - 0.968 - - OMA1 zinc metallopeptidase [Source:HGNC Symbol;Acc:HGNC:29661]
48. ATP8B1 ENSGALG00000030834 521 0.965 - - - - - - - 0.965 - - ATPase phospholipid transporting 8B1 [Source:NCBI gene;Acc:426857]
49. LMNB2 ENSGALG00000000470 4364 0.962 - - - - - - - 0.962 - - lamin B2 [Source:NCBI gene;Acc:396222]
50. HDHD2 ENSGALG00000034801 6373 0.962 - - - - - - - 0.962 - - haloacid dehalogenase like hydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25364]
51. LGALS1 ENSGALG00000012420 13993 0.961 - - - - - - - 0.961 - - galectin 1 [Source:NCBI gene;Acc:396491]
52. FAM192A ENSGALG00000021473 10213 0.961 - - - - - - - 0.961 - - family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
53. ACADSB ENSGALG00000041417 7710 0.956 - - - - - - - 0.956 - - acyl-CoA dehydrogenase short/branched chain [Source:NCBI gene;Acc:423947]
54. SNAPC5 ENSGALG00000007695 4117 0.956 - - - - - - - 0.956 - - small nuclear RNA activating complex polypeptide 5 [Source:NCBI gene;Acc:415550]
55. CHN1 ENSGALG00000009293 6415 0.956 - - - - - - - 0.956 - - chimerin 1 [Source:NCBI gene;Acc:429021]
56. FKBP15 ENSGALG00000008838 3677 0.953 - - - - - - - 0.953 - - FK506 binding protein 15 [Source:HGNC Symbol;Acc:HGNC:23397]
57. RNF10 ENSGALG00000036417 8027 0.951 - - - - - - - 0.951 - - ring finger protein 10 [Source:HGNC Symbol;Acc:HGNC:10055]
58. KXD1 ENSGALG00000036736 3771 0.949 - - - - - - - 0.949 - - KxDL motif containing 1 [Source:HGNC Symbol;Acc:HGNC:28420]
59. MRPL48 ENSGALG00000017319 9773 0.948 - - - - - - - 0.948 - - mitochondrial ribosomal protein L48 [Source:NCBI gene;Acc:419062]
60. UFD1L 12964 0.947 - - - - - - - 0.947 - - ubiquitin fusion degradation 1 like (yeast)
61. RAB6A ENSGALG00000017320 10569 0.946 - - - - - - - 0.946 - - RAB6A, member RAS oncogene family [Source:NCBI gene;Acc:419063]
62. NFI1 NFI1 6210 0.939 - - - - - - - 0.939 - -
63. ERLIN1 ENSGALG00000003308 6427 0.939 - - - - - - - 0.939 - - ER lipid raft associated 1 [Source:NCBI gene;Acc:423670]
64. IPO9 ENSGALG00000000397 9263 0.939 - - - - - - - 0.939 - - importin 9 [Source:HGNC Symbol;Acc:HGNC:19425]
65. APIP ENSGALG00000031286 6838 0.928 - - - - - - - 0.928 - - APAF1 interacting protein [Source:NCBI gene;Acc:428860]
66. RBP5 ENSGALG00000014662 31268 0.915 - - - - - - - 0.915 - - retinol binding protein 5 [Source:NCBI gene;Acc:418296]
67. WBP11 ENSGALG00000011745 11182 0.912 - - - - - - - 0.912 - - WW domain binding protein 11, transcript variant X1
68. TSSC4 ENSGALG00000006530 10413 0.911 - - - - - - - 0.911 - - tumor suppressing subtransferable candidate 4 [Source:NCBI gene;Acc:423092]
69. TPRG1L ENSGALG00000001024 9809 0.909 - - - - - - - 0.909 - - tumor protein p63 regulated 1 like [Source:HGNC Symbol;Acc:HGNC:27007]
70. STT3B ENSGALG00000011465 11939 0.909 - - - - - - - 0.909 - - STT3B, catalytic subunit of the oligosaccharyltransferase complex [Source:NCBI gene;Acc:428444]
71. VAPB ENSGALG00000007549 15511 0.908 - - - - - - - 0.908 - - VAMP associated protein B and C [Source:NCBI gene;Acc:419317]
72. ZNF276 ENSGALG00000000513 2410 0.894 - - - - - - - 0.894 - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
73. SLC25A20 ENSGALG00000028227 7685 0.885 - - - - - - - 0.885 - - solute carrier family 25 member 20 [Source:HGNC Symbol;Acc:HGNC:1421]
74. LOC422426 ENSGALG00000009622 1470 0.874 - - - - - - - 0.874 - - uncharacterized LOC422426, transcript variant X2
75. LOC407092 ENSGALG00000013809 10706 0.869 - - - - - - - 0.869 - - AD012Z, transcript variant X5
76. WASL ENSGALG00000008797 5729 0.865 - - - - - - - 0.865 - - Wiskott-Aldrich syndrome like [Source:NCBI gene;Acc:417750]
77. RBBP6 ENSGALG00000006043 9708 0.858 - - - - - - - 0.858 - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
78. CHRAC1 ENSGALG00000040823 5695 0.848 - - - - - - 0.848 - - - chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
79. TOP3B ENSGALG00000030051 5953 0.847 - - - - - - - 0.847 - - DNA topoisomerase III beta [Source:NCBI gene;Acc:416771]
80. ITGB5 ENSGALG00000029766 5978 0.842 - - - - - - - 0.842 - - integrin subunit beta 5 [Source:NCBI gene;Acc:395142]
81. TFAM ENSGALG00000002703 19330 0.84 - - - - - - - 0.840 - - transcription factor A, mitochondrial [Source:NCBI gene;Acc:373888]
82. MESDC1 1013 0.837 - - - - - - - 0.837 - - mesoderm development candidate 1
83. MTCH2 ENSGALG00000036196 15097 0.834 - - - - - - - 0.834 - - mitochondrial carrier 2 [Source:NCBI gene;Acc:395597]
84. DENR ENSGALG00000003795 30805 0.833 - - - - - - - 0.833 - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
85. YEATS2 ENSGALG00000036356 3194 0.83 - - - - - - 0.830 - - - YEATS domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25489]
86. MEF2BNB MEF2BNB 5578 0.826 - - - - - - 0.826 - - -
87. CPSF2 ENSGALG00000010783 5236 0.826 - - - - - - - 0.826 - - cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
88. GATD3A ENSGALG00000016918 24760 0.825 - - - - - - - 0.825 - - glutamine amidotransferase like class 1 domain containing 3A [Source:NCBI gene;Acc:418811]
89. MFAP3 ENSGALG00000004040 6951 0.818 - - - - - - - 0.818 - - microfibrillar associated protein 3 [Source:NCBI gene;Acc:416261]
90. TCTN3 ENSGALG00000010517 3985 0.817 - - - - - - 0.817 - - - tectonic family member 3 [Source:NCBI gene;Acc:100857412]
91. TAX1BP1 ENSGALG00000042822 7728 0.812 - - - - - - - 0.812 - - Tax1 binding protein 1 [Source:NCBI gene;Acc:395490]
92. AN1ZNF5L ENSGALG00000014589 21148 0.808 - - - - - - 0.808 - - - AN1-type zinc finger protein 5-like, transcript variant X2
93. CRMP1B CRMP1B 18633 0.807 - - - - - - - 0.807 - -
94. TMEM18 ENSGALG00000028744 11779 0.806 - - - - - - - 0.806 - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
95. MKP3 MKP3 4418 0.802 - - - - - - 0.802 - - -
96. NRSN1 ENSGALG00000037811 11424 0.802 - - - - - - - 0.802 - - neurensin 1 [Source:HGNC Symbol;Acc:HGNC:17881]
97. CEP78 ENSGALG00000015179 5227 0.801 - - - - - - 0.801 - - - centrosomal protein 78 [Source:HGNC Symbol;Acc:HGNC:25740]
98. PRELID1 ENSGALG00000002990 55592 0.798 - - - - - - 0.798 - - - PRELI domain containing 1 [Source:NCBI gene;Acc:395819]
99. UBE2D3 ENSGALG00000012311 39831 0.792 - - - - - - - 0.792 - - ubiquitin conjugating enzyme E2 D3 [Source:NCBI gene;Acc:422713]
100. LRRFIP2 ENSGALG00000033102 8250 0.791 - - - - - - 0.791 - - - LRR binding FLII interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:6703]

There are 161 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA