Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RPAIN

Gene Name Gene ID Reads Annotation
RPAIN ENSGALG00000001666 2676 RPA interacting protein [Source:HGNC Symbol;Acc:HGNC:28641]











Genes with expression patterns similar to RPAIN

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RPAIN ENSGALG00000001666 2676 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RPA interacting protein [Source:HGNC Symbol;Acc:HGNC:28641]
2. SUPV3L1 ENSGALG00000004197 4141 1.719 - - - - - - 0.727 0.992 - - Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
3. AP1B1 ENSGALG00000042213 4828 1.692 - - - - - - 0.718 0.974 - - adaptor related protein complex 1 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:554]
4. WDR51B WDR51B 5757 1.518 - - - - - - 0.713 0.805 - -
5. SETD9 ENSGALG00000014719 5081 0.999 - - - - - - - 0.999 - - SET domain containing 9, transcript variant X2
6. TUBD1 ENSGALG00000005173 1364 0.999 - - - - - - - 0.999 - - tubulin delta 1 [Source:HGNC Symbol;Acc:HGNC:16811]
7. CNTRL ENSGALG00000001513 1773 0.998 - - - - - - - 0.998 - - centriolin [Source:NCBI gene;Acc:417121]
8. QSOX2 ENSGALG00000001758 638 0.998 - - - - - - - 0.998 - - quiescin sulfhydryl oxidase 2 [Source:HGNC Symbol;Acc:HGNC:30249]
9. ACTA1 ENSGALG00000011086 2543 0.998 - - - - - - - 0.998 - - actin, alpha 1, skeletal muscle [Source:NCBI gene;Acc:421534]
10. ZNF318 ENSGALG00000034040 1758 0.998 - - - - - - - 0.998 - - zinc finger protein 318 [Source:HGNC Symbol;Acc:HGNC:13578]
11. LAMA5 486 0.998 - - - - - - - 0.998 - - laminin subunit alpha 5, transcript variant X3
12. RNF19B ENSGALG00000039716 662 0.998 - - - - - - - 0.998 - - ring finger protein 19B [Source:HGNC Symbol;Acc:HGNC:26886]
13. CENPJ ENSGALG00000017148 1415 0.998 - - - - - - - 0.998 - - centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
14. VPRBP VPRBP 4037 0.998 - - - - - - - 0.998 - -
15. REPS2 ENSGALG00000016545 3347 0.998 - - - - - - - 0.998 - - RALBP1 associated Eps domain containing 2 [Source:NCBI gene;Acc:418617]
16. TLCD2 ENSGALG00000021592 1166 0.997 - - - - - - - 0.997 - - TLC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:33522]
17. FRAS1 ENSGALG00000010316 5008 0.997 - - - - - - - 0.997 - - Fraser extracellular matrix complex subunit 1, transcript variant X2
18. AMACR ENSGALG00000003326 2657 0.997 - - - - - - - 0.997 - - alpha-methylacyl-CoA racemase [Source:NCBI gene;Acc:427429]
19. GTF2H3 ENSGALG00000023682 9914 0.997 - - - - - - - 0.997 - - general transcription factor IIH subunit 3 [Source:NCBI gene;Acc:771837]
20. AKAP2 ENSGALG00000015656 4310 0.997 - - - - - - - 0.997 - - A kinase (PRKA) anchor protein 2 [Source:NCBI gene;Acc:100533110]
21. BYSL ENSGALG00000003467 7555 0.997 - - - - - - - 0.997 - - bystin like [Source:HGNC Symbol;Acc:HGNC:1157]
22. SGCB ENSGALG00000013968 3214 0.997 - - - - - - - 0.997 - - sarcoglycan beta [Source:NCBI gene;Acc:422760]
23. NCAPG2 ENSGALG00000006525 2319 0.997 - - - - - - - 0.997 - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
24. STX8 ENSGALG00000001238 7403 0.997 - - - - - - - 0.997 - - syntaxin 8 [Source:NCBI gene;Acc:417321]
25. EDNRA ENSGALG00000010013 2472 0.996 - - - - - - - 0.996 - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
26. LIMCH1 ENSGALG00000014258 1987 0.996 - - - - - - - 0.996 - - LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:29191]
27. ANKRD46 ENSGALG00000041445 3791 0.996 - - - - - - - 0.996 - - ankyrin repeat domain 46, transcript variant X1
28. EVX1 ENSGALG00000037310 1974 0.995 - - - - - - - 0.995 - - even-skipped homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3506]
29. NQO2 ENSGALG00000025747 2287 0.995 - - - - - - - 0.995 - - N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856]
30. GTF2A1 ENSGALG00000010576 4570 0.995 - - - - - - - 0.995 - - general transcription factor IIA subunit 1 [Source:NCBI gene;Acc:423389]
31. ERBB2IP ERBB2IP 5800 0.994 - - - - - - - 0.994 - -
32. WDHD1 ENSGALG00000012199 3570 0.994 - - - - - - - 0.994 - - WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23170]
33. PTTG1IP ENSGALG00000005675, ENSGALG00000009044 10949 0.994 - - - - - - - 0.994 - - pituitary tumor-transforming 1 interacting protein, transcript variant X1
34. TAPA1 TAPA1 8669 0.994 - - - - - - - 0.994 - -
35. GPR27 ENSGALG00000027091 8111 0.993 - - - - - - - 0.993 - - G protein-coupled receptor 27
36. NAP1L1 ENSGALG00000010238 14506 0.993 - - - - - - - 0.993 - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
37. BMS1 ENSGALG00000002624 8339 0.993 - - - - - - - 0.993 - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
38. MON2 ENSGALG00000009795 3868 0.99 - - - - - - - 0.990 - - MON2 homolog, regulator of endosome-to-Golgi trafficking [Source:NCBI gene;Acc:417818]
39. MRPS35 ENSGALG00000036730 6327 0.987 - - - - - - - 0.987 - - mitochondrial ribosomal protein S35 [Source:NCBI gene;Acc:419048]
40. GNG2 ENSGALG00000027629 9404 0.985 - - - - - - - 0.985 - - G protein subunit gamma 2 [Source:NCBI gene;Acc:423581]
41. SOS1 ENSGALG00000039450 3941 0.984 - - - - - - - 0.984 - - SOS Ras/Rac guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:11187]
42. ACSF2 ENSGALG00000019768 2727 0.984 - - - - - - - 0.984 - - acyl-CoA synthetase family member 2 [Source:HGNC Symbol;Acc:HGNC:26101]
43. AMD1 ENSGALG00000039575 8900 0.984 - - - - - - - 0.984 - - adenosylmethionine decarboxylase 1 [Source:NCBI gene;Acc:421755]
44. MRE11A MRE11A 5754 0.98 - - - - - - - 0.980 - -
45. SERPINE2 ENSGALG00000005135 16108 0.98 - - - - - - - 0.980 - - serpin family E member 2 [Source:NCBI gene;Acc:424805]
46. MRPS11 ENSGALG00000006777 16009 0.978 - - - - - - - 0.978 - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
47. CTNNA1 ENSGALG00000002447 22379 0.968 - - - - - - - 0.968 - - catenin alpha 1 [Source:HGNC Symbol;Acc:HGNC:2509]
48. IST1 ENSGALG00000000811 10527 0.968 - - - - - - - 0.968 - - IST1, ESCRT-III associated factor [Source:HGNC Symbol;Acc:HGNC:28977]
49. COPS2 ENSGALG00000000404 8980 0.96 - - - - - - - 0.960 - - COP9 signalosome subunit 2 [Source:NCBI gene;Acc:430917]
50. RAD23B ENSGALG00000015540 10828 0.958 - - - - - - - 0.958 - - RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
51. C9orf78 ENSGALG00000004152 7140 0.948 - - - - - - - 0.948 - - chromosome 9 open reading frame 78 [Source:HGNC Symbol;Acc:HGNC:24932]
52. ACE ENSGALG00000000498 1398 0.946 - - - - - - - 0.946 - - angiotensin I converting enzyme [Source:NCBI gene;Acc:419953]
53. MPHOSPH8 ENSGALG00000017145 6280 0.945 - - - - - - - 0.945 - - M-phase phosphoprotein 8 [Source:NCBI gene;Acc:418957]
54. HNRNPH1 HNRNPH1 8819 0.931 - - - - - - - 0.931 - -
55. PSPC1 ENSGALG00000017142 13036 0.931 - - - - - - - 0.931 - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
56. ANKRD10 ENSGALG00000030125 3611 0.928 - - - - - - - 0.928 - - ankyrin repeat domain 10 [Source:NCBI gene;Acc:418760]
57. SNX9 ENSGALG00000013710 5295 0.92 - - - - - - - 0.920 - - sorting nexin 9 [Source:HGNC Symbol;Acc:HGNC:14973]
58. MOXD1 ENSGALG00000002911 8523 0.917 - - - - - - - 0.917 - - monooxygenase DBH like 1 [Source:NCBI gene;Acc:395333]
59. MAB21L1 ENSGALG00000045052 1677 0.914 - - - - - - - 0.914 - - mab-21 like 1 [Source:NCBI gene;Acc:395208]
60. MND1 ENSGALG00000009212 11765 0.912 - - - - - - - 0.912 - - meiotic nuclear divisions 1 [Source:NCBI gene;Acc:422399]
61. NHP2L1 NHP2L1 12124 0.911 - - - - - - - 0.911 - -
62. EXOSC3 ENSGALG00000002426 7255 0.907 - - - - - - - 0.907 - - exosome component 3 [Source:NCBI gene;Acc:423626]
63. MBNL3 ENSGALG00000032045 10980 0.906 - - - - - - - 0.906 - - muscleblind like splicing regulator 3 [Source:NCBI gene;Acc:422233]
64. Sep-05 Sep-05 5887 0.906 - - - - - - - 0.906 - -
65. ENSGALG00000014852 ENSGALG00000014852 15288 0.9 - - - - - - - 0.900 - -
66. HTT ENSGALG00000015635 226 0.897 - - - - - - - - 0.897 - huntingtin [Source:HGNC Symbol;Acc:HGNC:4851]
67. DDX18 ENSGALG00000012147 12463 0.894 - - - - - - - 0.894 - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
68. POLE3 ENSGALG00000008873 9161 0.893 - - - - - - - 0.893 - - DNA polymerase epsilon 3, accessory subunit [Source:NCBI gene;Acc:417275]
69. PSMC3 ENSGALG00000008108 22922 0.893 - - - - - - - 0.893 - - proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
70. GPI ENSGALG00000004956 40030 0.889 - - - - - - - 0.889 - - glucose-6-phosphate isomerase [Source:NCBI gene;Acc:415783]
71. ACTR2 ENSGALG00000008779 17812 0.88 - - - - - - - 0.880 - - ARP2 actin related protein 2 homolog [Source:NCBI gene;Acc:396147]
72. DGCR6 ENSGALG00000027369 7882 0.871 - - - - - - - 0.871 - - DiGeorge syndrome critical region gene 6 [Source:NCBI gene;Acc:395907]
73. UHRF2 ENSGALG00000015052 1268 0.865 - - - - - - - - 0.865 - ubiquitin like with PHD and ring finger domains 2 [Source:HGNC Symbol;Acc:HGNC:12557]
74. TSNAX ENSGALG00000037177 3246 0.864 - - - - - - - 0.864 - - translin associated factor X [Source:NCBI gene;Acc:421526]
75. ENSGALG00000002903 ENSGALG00000002903 18304 0.86 - - - - - - - 0.860 - -
76. PTEN ENSGALG00000003634 5048 0.859 - - - - - - - 0.859 - - phosphatase and tensin homolog [Source:HGNC Symbol;Acc:HGNC:9588]
77. CHRNA7 ENSGALG00000004096 107 0.855 - - - - - - - - 0.855 - cholinergic receptor nicotinic alpha 7 subunit [Source:NCBI gene;Acc:374001]
78. PPP2CA ENSGALG00000006462 26306 0.854 - - - - - - - 0.854 - - protein phosphatase 2 catalytic subunit alpha [Source:NCBI gene;Acc:416318]
79. RUVBL1 ENSGALG00000005931 9379 0.852 - - - - - - - - 0.852 - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
80. C1H13ORF27 C1H13ORF27 635 0.85 - - - - - - - - 0.850 -
81. TSPAN3 ENSGALG00000002774 28811 0.847 - - - - - - - 0.847 - - tetraspanin 3 [Source:NCBI gene;Acc:415348]
82. CHST6 ENSGALG00000000913, ENSGALG00000036545 7526 0.844 - - - - - - - 0.844 - - carbohydrate sulfotransferase 6 [Source:NCBI gene;Acc:770257]
83. SH3D19 ENSGALG00000010081 52 0.84 - - - - - - - - 0.840 - SH3 domain containing 19 [Source:HGNC Symbol;Acc:HGNC:30418]
84. SLC45A3 ENSGALG00000000703 85 0.837 - - - - - - - - 0.837 - solute carrier family 45 member 3 [Source:HGNC Symbol;Acc:HGNC:8642]
85. RAF1 ENSGALG00000004998 327 0.835 - - - - - - - - - 0.835 Raf-1 proto-oncogene, serine/threonine kinase [Source:NCBI gene;Acc:396245]
86. WDFY2 ENSGALG00000017019 2384 0.833 - - - - - - - 0.833 - - WD repeat and FYVE domain containing 2 [Source:NCBI gene;Acc:770107]
87. MAN2A1 ENSGALG00000000255 4543 0.833 - - - - - - - 0.833 - - mannosidase alpha class 2A member 1 [Source:HGNC Symbol;Acc:HGNC:6824]
88. CAT ENSGALG00000030187 7534 0.83 - - - - - - - - 0.830 - catalase [Source:NCBI gene;Acc:423600]
89. GPR12 ENSGALG00000017102 4 0.829 - - - - - - - - - 0.829 G protein-coupled receptor 12 [Source:HGNC Symbol;Acc:HGNC:4466]
90. MUC4 4 0.829 - - - - - - - - - 0.829 mucin 4, cell surface associated, transcript variant X5
91. C2 ENSGALG00000035721 5 0.829 - - - - - - - - - 0.829 complement C2 [Source:HGNC Symbol;Acc:HGNC:1248]
92. IFNG ENSGALG00000009903 5 0.829 - - - - - - - - - 0.829 interferon gamma [Source:NCBI gene;Acc:396054]
93. SCT ENSGALG00000034822, ENSGALG00000037020 14 0.829 - - - - - - - - - 0.829 secretin, transcript variant X6
94. ROS1 ENSGALG00000014913 7 0.829 - - - - - - - - - 0.829 ROS proto-oncogene 1, receptor tyrosine kinase [Source:NCBI gene;Acc:396192]
95. ENSGALG00000012920 ENSGALG00000012920 8 0.829 - - - - - - - - - 0.829
96. LOC100858777 ENSGALG00000027624 58 0.829 - - - - - - - - - 0.829 rhodopsin, GQ-coupled-like
97. NOX3 ENSGALG00000013659 4 0.829 - - - - - - - - - 0.829 NADPH oxidase 3 [Source:HGNC Symbol;Acc:HGNC:7890]
98. NCX1 NCX1 9 0.829 - - - - - - - - - 0.829
99. CHST8 ENSGALG00000004903 16 0.829 - - - - - - - - - 0.829 carbohydrate sulfotransferase 8 [Source:HGNC Symbol;Acc:HGNC:15993]
100. NOC3L ENSGALG00000035667 7441 0.829 - - - - - - - 0.829 - - NOC3 like DNA replication regulator [Source:HGNC Symbol;Acc:HGNC:24034]

There are 226 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA