Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RPA2

Gene Name Gene ID Reads Annotation
RPA2 39663 replication protein A2











Genes with expression patterns similar to RPA2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RPA2 39663 9 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 replication protein A2
2. PDCD10 ENSGALG00000009477 7061 1.618 - - - - - - 0.792 0.826 - - programmed cell death 10 [Source:NCBI gene;Acc:425003]
3. EIF4E ENSGALG00000042112 27720 1.601 - - - - 0.729 - 0.872 - - - eukaryotic translation initiation factor 4E [Source:HGNC Symbol;Acc:HGNC:3287]
4. CSE1L ENSGALG00000004707 20653 1.592 - - - - - - 0.765 0.827 - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
5. C17H9ORF16 C17H9ORF16 7908 1.547 - - - - - - 0.717 0.830 - -
6. C C 7669 1.51 - - - - - - 0.749 0.761 - -
7. G3BP1 ENSGALG00000004160 36795 1.497 - - - - - 0.749 0.748 - - - G3BP stress granule assembly factor 1 [Source:NCBI gene;Acc:416265]
8. DNAJC9 ENSGALG00000002701 19249 1.459 - - - - - - 0.741 0.718 - - DnaJ heat shock protein family (Hsp40) member C9 [Source:NCBI gene;Acc:423640]
9. ZNHIT3 ENSGALG00000026031 8652 1.451 - - - - - - 0.702 0.749 - - zinc finger HIT-type containing 3 [Source:HGNC Symbol;Acc:HGNC:12309]
10. SFPQ ENSGALG00000002514 66832 0.895 - - - - - - 0.895 - - - splicing factor proline and glutamine rich [Source:HGNC Symbol;Acc:HGNC:10774]
11. DYNLT1 ENSGALG00000019979 38176 0.893 - - - - - - 0.893 - - - dynein light chain Tctex-type 1 [Source:HGNC Symbol;Acc:HGNC:11697]
12. GATC ENSGALG00000007195 8610 0.855 - - - - - - - 0.855 - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
13. CCDC104 CCDC104 6584 0.854 - - - - - - - 0.854 - -
14. OLA1 ENSGALG00000009325 26414 0.852 - - - - - - 0.852 - - - Obg like ATPase 1 [Source:NCBI gene;Acc:424144]
15. COPS8 ENSGALG00000033385 10166 0.852 - - - - - - - 0.852 - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
16. SOD1 ENSGALG00000015844 35836 0.851 - - - - - - 0.851 - - - superoxide dismutase 1, soluble [Source:NCBI gene;Acc:395938]
17. CDKAL1 ENSGALG00000012677 4733 0.848 - - - - - - - 0.848 - - CDK5 regulatory subunit associated protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:21050]
18. GNL2 ENSGALG00000001973 10148 0.848 - - - - - - - 0.848 - - G protein nucleolar 2 [Source:HGNC Symbol;Acc:HGNC:29925]
19. ATP5H 53898 0.847 - - - - - - 0.847 - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit D, transcript variant X2
20. EIF3B ENSGALG00000040999 49971 0.846 - - - - - - 0.846 - - - eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
21. SNORA72 SNORA72 27695 0.846 - - - - - - - 0.846 - -
22. TMEM60 ENSGALG00000008330 6303 0.845 - - - - - - - 0.845 - - transmembrane protein 60 [Source:NCBI gene;Acc:417727]
23. STX2 ENSGALG00000002536 10438 0.842 - - - - - - - 0.842 - - syntaxin 2 [Source:NCBI gene;Acc:378895]
24. DCK ENSGALG00000028501 8675 0.841 - - - - - - - 0.841 - - deoxycytidine kinase [Source:NCBI gene;Acc:422648]
25. NKIRAS2 ENSGALG00000028971 3414 0.841 - - - - - - - 0.841 - - NFKB inhibitor interacting Ras like 2 [Source:NCBI gene;Acc:420032]
26. BLCAP ENSGALG00000027126 12200 0.84 - - - - - - - 0.840 - - BLCAP, apoptosis inducing factor [Source:NCBI gene;Acc:100857695]
27. ATP11B ENSGALG00000008839 3455 0.84 - - - - - - - 0.840 - - ATPase phospholipid transporting 11B (putative), transcript variant X3
28. ATP5F1 80590 0.839 - - - - - - 0.839 - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit B1
29. MYO9A ENSGALG00000033618 4505 0.839 - - - - - - - 0.839 - - myosin IXA, transcript variant X10
30. ZCCHC10 ENSGALG00000036666 5148 0.839 - - - - - - - 0.839 - - zinc finger CCHC-type containing 10 [Source:HGNC Symbol;Acc:HGNC:25954]
31. NDUFB4 ENSGALG00000027688 8951 0.838 - - - - - - - 0.838 - - NADH:ubiquinone oxidoreductase subunit B4 [Source:HGNC Symbol;Acc:HGNC:7699]
32. TTC37 ENSGALG00000014670 5715 0.838 - - - - - - - 0.838 - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
33. MTFR2 ENSGALG00000019967 4436 0.837 - - - - - - - 0.837 - - mitochondrial fission regulator 2, transcript variant X1
34. HPS4 ENSGALG00000005595 2217 0.837 - - - - - - - 0.837 - - HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 [Source:HGNC Symbol;Acc:HGNC:15844]
35. RPL21 ENSGALG00000027035 244232 0.836 - - - - - - 0.836 - - - ribosomal protein L21 [Source:HGNC Symbol;Acc:HGNC:10313]
36. MAGT1 ENSGALG00000007861 9105 0.836 - - - - - - - 0.836 - - magnesium transporter 1 [Source:NCBI gene;Acc:422332]
37. DIMT1 ENSGALG00000020569 5150 0.833 - - - - - - - 0.833 - - DIM1 dimethyladenosine transferase 1 homolog [Source:HGNC Symbol;Acc:HGNC:30217]
38. DEPDC1B ENSGALG00000014729 5334 0.833 - - - - - - - 0.833 - - DEP domain containing 1B [Source:NCBI gene;Acc:427152]
39. SIRT6 ENSGALG00000001245 3716 0.833 - - - - - - - 0.833 - - sirtuin 6 [Source:NCBI gene;Acc:428332]
40. TEX10 ENSGALG00000013438 3121 0.832 - - - - - - - 0.832 - - testis expressed 10 [Source:NCBI gene;Acc:420993]
41. NEO1 ENSGALG00000001774 10165 0.832 - - - - - - - 0.832 - - neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
42. ACVR2B ENSGALG00000006158 8692 0.832 - - - - - - - 0.832 - - activin A receptor type 2B [Source:NCBI gene;Acc:374213]
43. CCDC58 ENSGALG00000014413 9022 0.831 - - - - - - - 0.831 - - coiled-coil domain containing 58 [Source:NCBI gene;Acc:418269]
44. MRPL32 ENSGALG00000037258 6861 0.831 - - - - - - - 0.831 - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
45. GRPEL1 ENSGALG00000015549 11246 0.83 - - - - - - - 0.830 - - GrpE like 1, mitochondrial [Source:NCBI gene;Acc:422865]
46. THOC7 ENSGALG00000007299 38227 0.829 - - - - - - 0.829 - - - THO complex 7 [Source:NCBI gene;Acc:416077]
47. SULF1 ENSGALG00000039553 5115 0.829 - - - - - - - 0.829 - - sulfatase 1 [Source:HGNC Symbol;Acc:HGNC:20391]
48. PIGB ENSGALG00000037734 2193 0.828 - - - - - - - 0.828 - - phosphatidylinositol glycan anchor biosynthesis class B [Source:HGNC Symbol;Acc:HGNC:8959]
49. PRDM6 ENSGALG00000005351 2078 0.827 - - - - - - - 0.827 - - PR/SET domain 6 [Source:HGNC Symbol;Acc:HGNC:9350]
50. IVD ENSGALG00000040267 5820 0.826 - - - - - - - 0.826 - - isovaleryl-CoA dehydrogenase [Source:NCBI gene;Acc:423011]
51. RAD52 ENSGALG00000039171 6989 0.826 - - - - - - - 0.826 - - RAD52 homolog, DNA repair protein [Source:NCBI gene;Acc:418152]
52. UQCR10 ENSGALG00000008066 52968 0.825 - - - - - - 0.825 - - - ubiquinol-cytochrome c reductase, complex III subunit X [Source:NCBI gene;Acc:770937]
53. SFXN1 ENSGALG00000033956 2713 0.825 - - - - - - - 0.825 - - sideroflexin 1 [Source:NCBI gene;Acc:416221]
54. ADAMTS6 ENSGALG00000014751 1293 0.824 - - - - - - - 0.824 - - ADAM metallopeptidase with thrombospondin type 1 motif 6 [Source:HGNC Symbol;Acc:HGNC:222]
55. SPR ENSGALG00000000067 3456 0.824 - - - - - - - 0.824 - - sepiapterin reductase [Source:HGNC Symbol;Acc:HGNC:11257]
56. FSBP 3152 0.824 - - - - - - - 0.824 - - fibrinogen silencer binding protein
57. MIEN1 ENSGALG00000026328 3396 0.823 - - - - - - - 0.823 - - migration and invasion enhancer 1 [Source:HGNC Symbol;Acc:HGNC:28230]
58. AVENAII AVENAII 4552 0.823 - - - - - - - 0.823 - -
59. TXNDC12 ENSGALG00000010569 13822 0.823 - - - - - - 0.823 - - - thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
60. RAB20 ENSGALG00000016844 3250 0.822 - - - - - - - 0.822 - - RAB20, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18260]
61. TMEM26 ENSGALG00000025862 2222 0.821 - - - - - - - 0.821 - - transmembrane protein 26 [Source:NCBI gene;Acc:423663]
62. AP5Z1 ENSGALG00000040528 4302 0.821 - - - - - - - 0.821 - - adaptor related protein complex 5 subunit zeta 1 [Source:HGNC Symbol;Acc:HGNC:22197]
63. KCNK2 ENSGALG00000009687 1552 0.821 - - - - - - - 0.821 - - potassium two pore domain channel subfamily K member 2 [Source:HGNC Symbol;Acc:HGNC:6277]
64. ENSGALG00000002852 ENSGALG00000002852 2687 0.819 - - - - - - - 0.819 - -
65. TXN2 ENSGALG00000012532 12518 0.819 - - - - - - 0.819 - - - thioredoxin 2 [Source:NCBI gene;Acc:426978]
66. TMEM200C ENSGALG00000030210 1434 0.817 - - - - - - - 0.817 - - transmembrane protein 200C [Source:HGNC Symbol;Acc:HGNC:37208]
67. HSPA9 ENSGALG00000002363 31172 0.816 - - - - - - 0.816 - - - heat shock protein family A (Hsp70) member 9 [Source:NCBI gene;Acc:416183]
68. CNPY3 ENSGALG00000028471 1413 0.816 - - - - - - - 0.816 - - canopy FGF signaling regulator 3 [Source:HGNC Symbol;Acc:HGNC:11968]
69. CCDC15 1759 0.816 - - - - - - - 0.816 - - coiled-coil domain containing 15
70. RPL22L1 ENSGALG00000009312 59030 0.815 - - - - - - 0.815 - - - ribosomal protein L22 like 1 [Source:NCBI gene;Acc:100858296]
71. UQCR11 ENSGALG00000001096 25245 0.815 - - - - - - - 0.815 - - ubiquinol-cytochrome c reductase, complex III subunit XI [Source:NCBI gene;Acc:770135]
72. DAB2 ENSGALG00000003803 6143 0.814 - - - - - - - 0.814 - - DAB2, clathrin adaptor protein [Source:HGNC Symbol;Acc:HGNC:2662]
73. RAC2 ENSGALG00000012456 987 0.813 - - - - - - - 0.813 - - Rac family small GTPase 2 [Source:NCBI gene;Acc:418044]
74. TM9SF2L ENSGALG00000006487 5566 0.813 - - - - - - - 0.813 - - transmembrane 9 superfamily member 2-like [Source:NCBI gene;Acc:422249]
75. KIF1A ENSGALG00000006221 1989 0.813 - - - - - - - 0.813 - - kinesin family member 1A [Source:HGNC Symbol;Acc:HGNC:888]
76. EFR3B ENSGALG00000016605 234 0.812 - - - - - - - 0.812 - - EFR3 homolog B [Source:HGNC Symbol;Acc:HGNC:29155]
77. TNNI1 ENSGALG00000000313 4069 0.812 - - - - - - - 0.812 - - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
78. SYNM ENSGALG00000007048 705 0.812 - - - - - - - 0.812 - - synemin [Source:NCBI gene;Acc:395599]
79. DEK ENSGALG00000012684 14179 0.811 - - - - - - 0.811 - - - DEK proto-oncogene [Source:NCBI gene;Acc:420828]
80. TXNDC17 ENSGALG00000027950 45004 0.811 - - - - - - 0.811 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
81. FAXDC2 ENSGALG00000003972 172 0.81 - - - - - - - 0.810 - - fatty acid hydroxylase domain containing 2 [Source:NCBI gene;Acc:416256]
82. KIAA0020 KIAA0020 14353 0.81 - - - - - - - 0.810 - -
83. ENSGALG00000006278 ENSGALG00000006278 202 0.81 - - - - - - - 0.810 - -
84. ARHGEF18 ENSGALG00000003572 224 0.81 - - - - - - - 0.810 - - Rho/Rac guanine nucleotide exchange factor 18, transcript variant X1
85. TP53BP2 ENSGALG00000042816 12368 0.809 - - - - - - - 0.809 - - tumor protein p53 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:12000]
86. SEC11A ENSGALG00000037553 32123 0.808 - - - - - - 0.808 - - - SEC11 homolog A, signal peptidase complex subunit [Source:NCBI gene;Acc:415334]
87. SSBP1 ENSGALG00000012876 34256 0.808 - - - - - - 0.808 - - - single stranded DNA binding protein 1 [Source:NCBI gene;Acc:418122]
88. RAB11A ENSGALG00000007615 9154 0.807 - - - - - - - 0.807 - - RAB11A, member RAS oncogene family [Source:NCBI gene;Acc:415544]
89. SLC25A39 ENSGALG00000042894 10654 0.804 - - - - - - 0.804 - - - solute carrier family 25 member 39 [Source:HGNC Symbol;Acc:HGNC:24279]
90. ACVR1 ENSGALG00000037301 6448 0.803 - - - - - - - 0.803 - - activin A receptor type 1 [Source:NCBI gene;Acc:395246]
91. SIGMAR1 ENSGALG00000028996 12267 0.803 - - - - - - 0.803 - - - sigma non-opioid intracellular receptor 1 [Source:NCBI gene;Acc:100859748]
92. BMP7 ENSGALG00000007668 6645 0.801 - - - - - - - 0.801 - - bone morphogenetic protein 7 [Source:HGNC Symbol;Acc:HGNC:1074]
93. BEND5 ENSGALG00000010505 3298 0.798 - - - - - - - 0.798 - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
94. PCNP ENSGALG00000015330 15750 0.797 - - - - - - 0.797 - - - PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
95. SEC31A ENSGALG00000040484 20190 0.797 - - - - - - 0.797 - - - SEC31 homolog A, COPII coat complex component [Source:NCBI gene;Acc:422597]
96. ENSGALG00000006463 ENSGALG00000006463 45151 0.797 - - - - - - 0.797 - - -
97. ACOT7 ENSGALG00000000652 7976 0.797 - - - - - 0.797 - - - - acyl-CoA thioesterase 7 [Source:HGNC Symbol;Acc:HGNC:24157]
98. MTAP ENSGALG00000008174 10976 0.796 - - - - - - 0.796 - - - methylthioadenosine phosphorylase [Source:NCBI gene;Acc:431261]
99. VCP ENSGALG00000001986 23679 0.795 - - - - - - 0.795 - - - valosin containing protein [Source:NCBI gene;Acc:427410]
100. DKC1 ENSGALG00000005054 30350 0.793 - - - - - - 0.793 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]

There are 240 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA