Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RP9

Gene Name Gene ID Reads Annotation
RP9 ENSGALG00000035453 1186 retinitis pigmentosa 9 (autosomal dominant)











Genes with expression patterns similar to RP9

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RP9 ENSGALG00000035453 1186 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 retinitis pigmentosa 9 (autosomal dominant)
2. C5orf24 ENSGALG00000006371 1573 1.958 - - - - - - - 0.998 - 0.960 chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:HGNC:26746]
3. TRMT44 ENSGALG00000015594 1490 1.952 - - - - - - - 0.988 - 0.964 tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
4. TRIM24 ENSGALG00000012823 2725 1.931 - - - - - - - 0.969 - 0.962 tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
5. NET1 ENSGALG00000008437 9850 1.85 - - - - - - - 0.969 - 0.881 neuroepithelial cell transforming 1 [Source:NCBI gene;Acc:416693]
6. DNAJA1 ENSGALG00000023066 3820 1.837 - - - - - - - 0.988 - 0.849 DnaJ heat shock protein family (Hsp40) member A1 [Source:NCBI gene;Acc:427376]
7. BAZ1B ENSGALG00000029408 5921 1.715 - - - - - - - 0.968 - 0.747 bromodomain adjacent to zinc finger domain 1B [Source:HGNC Symbol;Acc:HGNC:961]
8. RNF214 ENSGALG00000036993 3729 1.699 - - - - - - - 0.971 - 0.728 ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
9. DUSP14 ENSGALG00000027641 3662 1.686 - - - - - - - 0.977 - 0.709 dual specificity phosphatase 14 [Source:HGNC Symbol;Acc:HGNC:17007]
10. NDUFB3 ENSGALG00000008239 15511 1.657 - - - - - - - 0.857 - 0.800 NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
11. AHCTF1 ENSGALG00000010630 4809 1.645 - - - - - - - 0.897 0.748 - AT-hook containing transcription factor 1 [Source:NCBI gene;Acc:421484]
12. DLD ENSGALG00000007931 11011 1.591 - - - - - - - 0.844 - 0.747 dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
13. TPP2 ENSGALG00000016865 7509 1.493 - - - - - - - 0.787 - 0.706 tripeptidyl peptidase 2 [Source:HGNC Symbol;Acc:HGNC:12016]
14. LIMD1 ENSGALG00000035623 7282 1.48 - - - - - - - 0.764 0.716 - LIM domains containing 1 [Source:HGNC Symbol;Acc:HGNC:6612]
15. TRPC6 ENSGALG00000029416 281 0.998 - - - - - - - 0.998 - - transient receptor potential cation channel subfamily C member 6 [Source:HGNC Symbol;Acc:HGNC:12338]
16. INOS INOS 313 0.997 - - - - - - - 0.997 - -
17. FIGN ENSGALG00000011069 311 0.997 - - - - - - - 0.997 - - fidgetin, microtubule severing factor [Source:HGNC Symbol;Acc:HGNC:13285]
18. PHLPP1 ENSGALG00000012888 398 0.997 - - - - - - - 0.997 - - PH domain and leucine rich repeat protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:20610]
19. IRX1 ENSGALG00000030991 1474 0.997 - - - - - - - 0.997 - - iroquois homeobox 1 [Source:NCBI gene;Acc:374185]
20. GTDC1 ENSGALG00000012424 1446 0.997 - - - - - - - 0.997 - - glycosyltransferase like domain containing 1 [Source:NCBI gene;Acc:424304]
21. RGS9 ENSGALG00000029610 112 0.997 - - - - - - - 0.997 - - regulator of G protein signaling 9 [Source:HGNC Symbol;Acc:HGNC:10004]
22. C7orf25 ENSGALG00000040161 694 0.997 - - - - - - - 0.997 - - chromosome 7 open reading frame 25 [Source:HGNC Symbol;Acc:HGNC:21703]
23. H3-I H3-I 1498 0.997 - - - - - - - 0.997 - -
24. MYH15 ENSGALG00000015358 6304 0.996 - - - - - - - 0.996 - - myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
25. ADIPOR1 ENSGALG00000000094 1862 0.996 - - - - - - - 0.996 - - adiponectin receptor 1 [Source:NCBI gene;Acc:421148]
26. ITGA9 ENSGALG00000029378 415 0.996 - - - - - - - 0.996 - - integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
27. ALG9 ENSGALG00000021174 745 0.996 - - - - - - - 0.996 - - ALG9, alpha-1,2-mannosyltransferase, transcript variant X5
28. RGS17 ENSGALG00000026034 707 0.995 - - - - - - - 0.995 - - regulator of G protein signaling 17 [Source:NCBI gene;Acc:395645]
29. HDGFL2 ENSGALG00000027068 1300 0.995 - - - - - - - 0.995 - - HDGF like 2 [Source:NCBI gene;Acc:772302]
30. TFEB ENSGALG00000039878 881 0.995 - - - - - - - 0.995 - - transcription factor EB [Source:NCBI gene;Acc:419922]
31. ATP8B4 ENSGALG00000002326 456 0.995 - - - - - - - 0.995 - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
32. APOOL ENSGALG00000006978 1953 0.994 - - - - - - - 0.994 - - apolipoprotein O like [Source:NCBI gene;Acc:422271]
33. NEMF ENSGALG00000012263 2250 0.994 - - - - - - - 0.994 - - nuclear export mediator factor [Source:NCBI gene;Acc:428926]
34. ARRDC4 ENSGALG00000007012 1039 0.993 - - - - - - - 0.993 - - arrestin domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28087]
35. PNISR ENSGALG00000015483 7711 0.993 - - - - - - - 0.993 - - PNN interacting serine and arginine rich protein [Source:NCBI gene;Acc:421796]
36. DEPDC7 ENSGALG00000011681 1181 0.993 - - - - - - - 0.993 - - DEP domain containing 7 [Source:NCBI gene;Acc:421593]
37. CC2D2A ENSGALG00000014514 1180 0.992 - - - - - - - 0.992 - - coiled-coil and C2 domain containing 2A [Source:HGNC Symbol;Acc:HGNC:29253]
38. ABCA3 ENSGALG00000037837 1606 0.992 - - - - - - - 0.992 - - ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
39. BTG1L ENSGALG00000004676 2293 0.992 - - - - - - - 0.992 - - protein BTG1-like
40. PKP4 ENSGALG00000012561 3087 0.991 - - - - - - - 0.991 - - plakophilin 4 [Source:NCBI gene;Acc:424328]
41. SMARCC1 ENSGALG00000032642 4842 0.991 - - - - - - - 0.991 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 [Source:HGNC Symbol;Acc:HGNC:11104]
42. MTMR9 ENSGALG00000016649 2055 0.991 - - - - - - - 0.991 - - myotubularin related protein 9 [Source:NCBI gene;Acc:422033]
43. CARS2 ENSGALG00000016847 3814 0.991 - - - - - - - 0.991 - - cysteinyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25695]
44. REXO1 ENSGALG00000001043 3179 0.991 - - - - - - - 0.991 - - RNA exonuclease 1 homolog [Source:HGNC Symbol;Acc:HGNC:24616]
45. AMMECR1L ENSGALG00000026728 2134 0.99 - - - - - - - 0.990 - - AMMECR1 like [Source:HGNC Symbol;Acc:HGNC:28658]
46. TFG ENSGALG00000015299 849 0.99 - - - - - - - - - 0.990 TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
47. TTI1 ENSGALG00000006791 1218 0.989 - - - - - - - - - 0.989 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
48. METTL22 ENSGALG00000033603 696 0.989 - - - - - - - 0.989 - - methyltransferase like 22 [Source:NCBI gene;Acc:425865]
49. NGEF ENSGALG00000036327 1048 0.988 - - - - - - - 0.988 - - neuronal guanine nucleotide exchange factor [Source:NCBI gene;Acc:424744]
50. NSRP1 ENSGALG00000004186 1683 0.988 - - - - - - - 0.988 - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
51. REV3L ENSGALG00000015033 1917 0.987 - - - - - - - 0.987 - - REV3 like, DNA directed polymerase zeta catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9968]
52. FGF18 ENSGALG00000002203 551 0.987 - - - - - - - 0.987 - - fibroblast growth factor 18 [Source:NCBI gene;Acc:395453]
53. CNKSR3 ENSGALG00000027159 41 0.987 - - - - - - - - - 0.987 CNKSR family member 3, transcript variant X2
54. gga-mir-1772 ENSGALG00000025300 2892 0.987 - - - - - - - 0.987 - - gga-mir-1772 [Source:miRBase;Acc:MI0007515]
55. ENSGALG00000008594 ENSGALG00000008594 54 0.986 - - - - - - - - - 0.986
56. DCTN5 ENSGALG00000006088 3113 0.986 - - - - - - - 0.986 - - dynactin subunit 5 [Source:NCBI gene;Acc:416574]
57. STX18 ENSGALG00000015012 1489 0.986 - - - - - - - 0.986 - - syntaxin 18 [Source:NCBI gene;Acc:422848]
58. ENSGALG00000018358 ENSGALG00000018358 101 0.986 - - - - - - - - - 0.986
59. UBE3C ENSGALG00000006461 57 0.986 - - - - - - - - - 0.986 ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
60. SOS2 ENSGALG00000012273 41 0.986 - - - - - - - - - 0.986 SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
61. TM6SF2 ENSGALG00000029015 109 0.986 - - - - - - - - - 0.986 transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
62. IFNAR2 ENSGALG00000041867 1596 0.985 - - - - - - - - - 0.985 interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
63. TMEM57 ENSGALG00000001067 3367 0.985 - - - - - - - 0.985 - - transmembrane protein 57 [Source:NCBI gene;Acc:419590]
64. AGMO ENSGALG00000010792 76 0.985 - - - - - - - - - 0.985 alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
65. RGP1 ENSGALG00000002394 5937 0.985 - - - - - - - - - 0.985 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
66. ADAMTS12 55 0.985 - - - - - - - - - 0.985 ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
67. ATP2B2 ENSGALG00000030908 584 0.985 - - - - - - - - - 0.985 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
68. SLC38A1 ENSGALG00000009698 566 0.984 - - - - - - - - - 0.984 solute carrier family 38 member 1 [Source:NCBI gene;Acc:417806]
69. CHAF1A ENSGALG00000001126 6506 0.984 - - - - - - - 0.984 - - chromatin assembly factor 1 subunit A [Source:NCBI gene;Acc:770217]
70. MAP3K8 ENSGALG00000007356 188 0.984 - - - - - - - - - 0.984 mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
71. STX6 3297 0.984 - - - - - - - - - 0.984 syntaxin 6
72. BCOR ENSGALG00000016245 85 0.984 - - - - - - - - - 0.984 BCL6 corepressor, transcript variant X8
73. ZC3H3 ENSGALG00000043265 1638 0.983 - - - - - - - 0.983 - - zinc finger CCCH-type containing 3 [Source:NCBI gene;Acc:430349]
74. TMEM59 ENSGALG00000010746 4669 0.983 - - - - - - - 0.983 - - transmembrane protein 59 [Source:NCBI gene;Acc:424656]
75. DTX2 ENSGALG00000001905 1475 0.983 - - - - - - - - - 0.983 deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
76. ENSGALG00000004772 ENSGALG00000004772 173 0.983 - - - - - - - - - 0.983
77. PYCR1 ENSGALG00000007300 7987 0.982 - - - - - - - 0.982 - - pyrroline-5-carboxylate reductase 1 [Source:NCBI gene;Acc:769203]
78. ZFPM2 ENSGALG00000040079 942 0.982 - - - - - - - - - 0.982 zinc finger protein, FOG family member 2 [Source:HGNC Symbol;Acc:HGNC:16700]
79. GOLGB1 ENSGALG00000041494 2376 0.981 - - - - - - - 0.981 - - golgin B1 [Source:HGNC Symbol;Acc:HGNC:4429]
80. PROCR ENSGALG00000006547 645 0.981 - - - - - - - - - 0.981 protein C receptor [Source:NCBI gene;Acc:424867]
81. NFKBIE ENSGALG00000044525 633 0.98 - - - - - - - - - 0.980 NFKB inhibitor epsilon [Source:HGNC Symbol;Acc:HGNC:7799]
82. PTPRE ENSGALG00000009823 250 0.98 - - - - - - - - - 0.980 protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
83. GRPEL2 ENSGALG00000002673 105 0.98 - - - - - - - - - 0.980 GrpE like 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21060]
84. ENSGALG00000027621 ENSGALG00000027621 863 0.979 - - - - - - - - - 0.979
85. TYSND1 ENSGALG00000033807 716 0.979 - - - - - - - - - 0.979 trypsin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28531]
86. NR2F2 ENSGALG00000007000 4911 0.979 - - - - - - - 0.979 - - nuclear receptor subfamily 2 group F member 2 [Source:NCBI gene;Acc:386585]
87. NUP210L 370 0.978 - - - - - - - 0.978 - - nucleoporin 210 like
88. MAP3K3 ENSGALG00000000525 115 0.978 - - - - - - - - - 0.978 mitogen-activated protein kinase kinase kinase 3 [Source:HGNC Symbol;Acc:HGNC:6855]
89. GPR114 GPR114 46 0.978 - - - - - - - - - 0.978
90. SERPINB6 ENSGALG00000012866 1582 0.978 - - - - - - - - - 0.978 serpin family B member 6 [Source:NCBI gene;Acc:420895]
91. EEA1 ENSGALG00000011280 923 0.977 - - - - - - - - - 0.977 early endosome antigen 1 [Source:HGNC Symbol;Acc:HGNC:3185]
92. RPRD2 ENSGALG00000014656 939 0.976 - - - - - - - - - 0.976 regulation of nuclear pre-mRNA domain containing 2 [Source:NCBI gene;Acc:425074]
93. VAV2 ENSGALG00000002699 503 0.976 - - - - - - - - - 0.976 vav guanine nucleotide exchange factor 2 [Source:NCBI gene;Acc:373938]
94. USP32 ENSGALG00000005350 1686 0.975 - - - - - - - 0.975 - - ubiquitin specific peptidase 32, transcript variant X2
95. gga-mir-1306 ENSGALG00000025271 1231 0.975 - - - - - - - 0.975 - - gga-mir-1306 [Source:miRBase;Acc:MI0007057]
96. FOXP1 127 0.975 - - - - - - - - - 0.975 forkhead box P1, transcript variant X14
97. ENSGALG00000014190 ENSGALG00000014190 5735 0.975 - - - - - - - 0.975 - -
98. CCBL2 CCBL2 184 0.975 - - - - - - - - - 0.975
99. CENPJ ENSGALG00000017148 1415 0.975 - - - - - - - - - 0.975 centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
100. SHPK ENSGALG00000004637 2386 0.975 - - - - - - - - - 0.975 sedoheptulokinase, transcript variant X1

There are 513 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA