Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RP1L1

Gene Name Gene ID Reads Annotation
RP1L1 12 retinitis pigmentosa 1 like 1











Genes with expression patterns similar to RP1L1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RP1L1 12 3 - - 1.000 1.000 1.000 - - - - - retinitis pigmentosa 1 like 1
2. CREB3 ENSGALG00000002523 23 1 - - - - 1.000 - - - - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
3. EXD3 30 1 - - - - 1.000 - - - - - exonuclease 3'-5' domain containing 3, transcript variant X23
4. HOXD11 ENSGALG00000039629 658 1 - - - - 1.000 - - - - - homeobox D11 [Source:NCBI gene;Acc:395328]
5. CHRNA4 ENSGALG00000005801 5 1 - - - - 1.000 - - - - - cholinergic receptor nicotinic alpha 4 subunit [Source:NCBI gene;Acc:395606]
6. TRAIL-LIKE ENSGALG00000007240 8 1 - - - - 1.000 - - - - - TNF-related apoptosis inducing ligand-like [Source:NCBI gene;Acc:395283]
7. TNFRSF8 ENSGALG00000039741 6 1 - - - - 1.000 - - - - - TNF receptor superfamily member 8 [Source:NCBI gene;Acc:395090]
8. PANK3 ENSGALG00000001895 11 1 - - - - 1.000 - - - - - pantothenate kinase 3 [Source:HGNC Symbol;Acc:HGNC:19365]
9. CD8A ENSGALG00000015900, ENSGALG00000038559 1 1 - - - - 1.000 - - - - - Gallus gallus CD8a molecule (CD8A), mRNA. [Source:RefSeq mRNA;Acc:NM_001048080]
10. ZBTB33 ENSGALG00000008611 15 0.958 - - - - 0.958 - - - - - zinc finger and BTB domain containing 33 [Source:HGNC Symbol;Acc:HGNC:16682]
11. FAM20C ENSGALG00000038768 31 0.941 - - - - 0.941 - - - - - FAM20C, golgi associated secretory pathway kinase [Source:HGNC Symbol;Acc:HGNC:22140]
12. IL8 ENSGALG00000026098 16 0.931 - - - - 0.931 - - - - - interleukin 8-like 2 [Source:NCBI gene;Acc:396495]
13. AP3M1 ENSGALG00000005070 712 0.899 - - - - 0.899 - - - - - adaptor related protein complex 3 subunit mu 1 [Source:NCBI gene;Acc:423736]
14. SLC24A4 ENSGALG00000010793 238 0.821 - - - - 0.821 - - - - - solute carrier family 24 member 4 [Source:HGNC Symbol;Acc:HGNC:10978]
15. ELOVL3 ENSGALG00000025772 212 0.813 - - - - 0.813 - - - - - Gallus gallus ELOVL fatty acid elongase 3 (ELOVL3), mRNA. [Source:RefSeq mRNA;Acc:NM_001318410]
16. STAM2 ENSGALG00000012513 9 0.794 - - - - 0.794 - - - - - signal transducing adaptor molecule 2 [Source:NCBI gene;Acc:424317]
17. LRFN2 ENSGALG00000010050 28 0.79 - - - - 0.790 - - - - - leucine rich repeat and fibronectin type III domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21226]
18. ENSGALG00000024064 ENSGALG00000024064 10 0.787 - - - - 0.787 - - - - -
19. ENSGALG00000023692 ENSGALG00000023692 6 0.768 - - - - 0.768 - - - - -
20. ENSGALG00000011129 ENSGALG00000011129 3 0.765 - - 0.765 - - - - - - -
21. FSHR ENSGALG00000009100 18 0.738 - - - - 0.738 - - - - - follicle stimulating hormone receptor [Source:NCBI gene;Acc:395962]
22. ENSGALG00000028654 ENSGALG00000028654 236 0.724 - - - - 0.724 - - - - -
23. ENSGALG00000005445 ENSGALG00000005445 16 0.722 - - - - 0.722 - - - - -
24. FGF6 ENSGALG00000017287 2 0.72 - - - 0.720 - - - - - - fibroblast growth factor 6 [Source:HGNC Symbol;Acc:HGNC:3684]
25. KCNH1 ENSGALG00000009877 2 0.72 - - - 0.720 - - - - - - potassium voltage-gated channel subfamily H member 1, transcript variant X8
26. GUCY2F ENSGALG00000000808 2 0.72 - - - 0.720 - - - - - - guanylate cyclase 2F, retinal
27. HNF1A ENSGALG00000006968 2 0.72 - - - 0.720 - - - - - - HNF1 homeobox A [Source:NCBI gene;Acc:416967]
28. gga-mir-6703 ENSGALG00000029026 124 0.72 - - 0.720 - - - - - - - gga-mir-6703 [Source:miRBase;Acc:MI0022525]
29. STOML3 ENSGALG00000017039 6 0.72 - - - 0.720 - - - - - - stomatin like 3 [Source:HGNC Symbol;Acc:HGNC:19420]
30. ENSGALG00000016962 ENSGALG00000016962 6 0.72 - - - 0.720 - - - - - -
31. ENSGALG00000006384 ENSGALG00000006384 3 0.72 - - - 0.720 - - - - - -
32. MAP2K1 ENSGALG00000007687 250 0.72 - - - 0.720 - - - - - - mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
33. ENSGALG00000021157 ENSGALG00000021157 5 0.72 - - - 0.720 - - - - - -
34. ATP7B ENSGALG00000017021 7 0.72 - - - 0.720 - - - - - - ATPase copper transporting beta [Source:HGNC Symbol;Acc:HGNC:870]
35. ITGB8 ENSGALG00000010875 13 0.72 - - - 0.720 - - - - - - integrin subunit beta 8 [Source:HGNC Symbol;Acc:HGNC:6163]
36. CLEC19A ENSGALG00000030546 8 0.72 - - - 0.720 - - - - - - C-type lectin domain containing 19A [Source:HGNC Symbol;Acc:HGNC:34522]
37. USP13 ENSGALG00000008909 8 0.717 - - 0.717 - - - - - - - ubiquitin specific peptidase 13 (isopeptidase T-3) [Source:NCBI gene;Acc:429286]
38. FAM81A ENSGALG00000004103 8 0.706 - - 0.706 - - - - - - - family with sequence similarity 81 member A [Source:HGNC Symbol;Acc:HGNC:28379]
39. SLC24A3 ENSGALG00000008445 8 0.706 - - - 0.706 - - - - - - solute carrier family 24 member 3 [Source:HGNC Symbol;Acc:HGNC:10977]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA