Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RP1

Gene Name Gene ID Reads Annotation
RP1 ENSDARG00000077687 6 retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]










Genes with expression patterns similar to RP1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RP1 ENSDARG00000077687 6 6 1.000 - 1.000 - 1.000 1.000 - 1.000 1.000 retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
2. si:dkeyp-107f9.4 ENSDARG00000104468 11 2 1.000 - - - - 1.000 - - - si:dkeyp-107f9.4 [Source:ZFIN;Acc:ZDB-GENE-120709-91]
3. ft2 ENSDARG00000109567 5 2 - - 1.000 - - 1.000 - - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
4. got1 ENSDARG00000039093 1 2 1.000 - 1.000 - - - - - - glutamic-oxaloacetic transaminase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-2003]
5. CABZ01117474.1 CABZ01117474.1 2 2 1.000 - 1.000 - - - - - -
6. CABZ01074946.1 CABZ01074946.1 119 2 1.000 - - - - 1.000 - - -
7. SPTBN4 ENSDARG00000092624 6 2 - - 1.000 - - 1.000 - - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
8. isg15 ENSDARG00000086374 8 2 1.000 - - - - - - 1.000 - ISG15 ubiquitin-like modifier [Source:ZFIN;Acc:ZDB-GENE-021211-1]
9. si:dkey-24i24.3 ENSDARG00000088452 27 2 1.000 - - - - 1.000 - - - si:dkey-24i24.3 [Source:ZFIN;Acc:ZDB-GENE-110411-103]
10. themis ENSDARG00000010619 5 2 - - 1.000 - - - - 1.000 - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
11. SNORA14 SNORA14 10 1.89 - - 0.890 - - 1.000 - - -
12. zgc:66024 ENSDARG00000068840, ENSDARG00000068846 37 1.835 0.835 - - - - 1.000 - - - zgc:66024 [Source:ZFIN;Acc:ZDB-GENE-040426-1511]
13. si:dkey-208k4.7 si:dkey-208k4.7 14 1.829 - - - - - - - 1.000 0.829
14. mir142a 20 1.812 - - - - 0.812 1.000 - - - microRNA 142a
15. RPS6KL1 ENSDARG00000079024 22 1.805 0.924 - - - 0.881 - - - - ribosomal protein S6 kinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-111020-10]
16. lcmt2 ENSDARG00000000747, ENSDARG00000110257 97 1.787 1.000 - - - - 0.787 - - - leucine carboxyl methyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-110714-2]
17. CR848763.1 CR848763.1 9 1.782 - - - - - 1.000 - - 0.782
18. zgc:153116 ENSDARG00000077205 7 1.782 - - - - - 1.000 - - 0.782 zgc:153116 [Source:ZFIN;Acc:ZDB-GENE-060825-107]
19. nceh1a ENSDARG00000020427 35 1.764 0.764 - - - - 1.000 - - - neutral cholesterol ester hydrolase 1a [Source:ZFIN;Acc:ZDB-GENE-040711-2]
20. STPG2 ENSDARG00000061060 16 1.764 0.764 - - - - 1.000 - - - sperm-tail PG-rich repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-061013-667]
21. crispld1a ENSDARG00000077275 7 1.764 1.000 - - - - - - - 0.764 cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
22. si:ch211-190k17.31 si:ch211-190k17.31 29 1.762 1.000 - - - - 0.762 - - -
23. cart2 ENSDARG00000045832, ENSDARG00000112535 13 1.757 - - 1.000 - - - - 0.757 - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
24. gnat1 ENSDARG00000044199 251 1.748 - - 1.000 - - - - - 0.748 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-011128-11]
25. rsph4a ENSDARG00000067606 132 1.742 1.000 - - - - 0.742 - - - radial spoke head component 4A [Source:ZFIN;Acc:ZDB-GENE-030131-7437]
26. si:dkey-25i10.5 si:dkey-25i10.5 18 1.715 0.715 - - - - 1.000 - - -
27. glmnb ENSDARG00000010958, ENSDARG00000109932 6 1.687 - - 0.923 - - - - - 0.764 glomulin, FKBP associated protein b [Source:ZFIN;Acc:ZDB-GENE-080723-14]
28. si:ch211-229i14.2 ENSDARG00000086048 19 1.673 0.903 - - - - - - - 0.770 si:ch211-229i14.2 [Source:ZFIN;Acc:ZDB-GENE-070705-123]
29. C3AR1 18 1.608 - - - - 0.737 - - 0.871 - C3a anaphylatoxin chemotactic receptor
30. gucy2f ENSDARG00000025504 6 1.554 - - 0.772 - - - - - 0.782 guanylate cyclase 2F, retinal [Source:ZFIN;Acc:ZDB-GENE-011128-7]
31. FP016207.1 FP016207.1 3 1.511 - - 0.729 - - - - - 0.782
32. mgrn1b ENSDARG00000004796 18 1.467 0.764 - - - - - - - 0.703 mahogunin, ring finger 1b [Source:ZFIN;Acc:ZDB-GENE-110401-3]
33. si:dkey-191g9.5 ENSDARG00000056080 60 1 1.000 - - - - - - - - si:dkey-191g9.5 [Source:ZFIN;Acc:ZDB-GENE-090313-217]
34. si:ch211-57i17.2 ENSDARG00000093354 58 1 - - 1.000 - - - - - - si:ch211-57i17.2 [Source:ZFIN;Acc:ZDB-GENE-041014-258]
35. stk32a ENSDARG00000079499 17 1 1.000 - - - - - - - - serine/threonine kinase 32A [Source:ZFIN;Acc:ZDB-GENE-091204-271]
36. si:ch211-240l19.6 ENSDARG00000074613, ENSDARG00000115536 7 1 - - - - - - - 1.000 - si:ch211-240l19.6 [Source:ZFIN;Acc:ZDB-GENE-041210-328]
37. BX927122.3 BX927122.3 19 1 - - - - - - - 1.000 -
38. ftr76 ENSDARG00000076093 1 1 - - - - - 1.000 - - - finTRIM family, member 76 [Source:ZFIN;Acc:ZDB-GENE-090508-15]
39. SNORA81_1 SNORA81_1 8 1 - - - - - 1.000 - - -
40. si:ch211-253d24.2 si:ch211-253d24.2 12 1 - - - - - 1.000 - - -
41. CABZ01088134.1 ENSDARG00000033587 4 1 - - - - - 1.000 - - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
42. ccdc127a 39 1 - - - - - 1.000 - - - coiled-coil domain containing 127a, transcript variant X2
43. GPR64 GPR64 58 1 1.000 - - - - - - - -
44. mep1a.1 ENSDARG00000029747 4 1 - - - - - - - 1.000 - meprin A, alpha (PABA peptide hydrolase), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041001-209]
45. RIMS1 RIMS1 9 1 1.000 - - - - - - - -
46. CU571170.2 CU571170.2 1 1 - - - - - - - 1.000 -
47. BX530066.1 BX530066.1 42 1 - - - - - 1.000 - - -
48. rxfp1 ENSDARG00000090071 6 1 - - 1.000 - - - - - - relaxin family peptide receptor 1 [Source:ZFIN;Acc:ZDB-GENE-110125-1]
49. zgc:123060_1 5 1 - - - - - 1.000 - - - zgc:123060
50. agfg1a ENSDARG00000030020 6 1 - - - - - 1.000 - - - ArfGAP with FG repeats 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5808]
51. si:dkey-80c24.1 ENSDARG00000070692 1 1 1.000 - - - - - - - - si:dkey-80c24.1 [Source:ZFIN;Acc:ZDB-GENE-061207-69]
52. pcdh2ab6 ENSDARG00000091043 1 1 - - 1.000 - - - - - - protocadherin 2 alpha b 6 [Source:ZFIN;Acc:ZDB-GENE-041118-5]
53. psme2 ENSDARG00000033144 3 1 - - - - - 1.000 - - - proteasome activator subunit 2 [Source:ZFIN;Acc:ZDB-GENE-991110-16]
54. apba2b ENSDARG00000060639 2 1 - - - - - 1.000 - - - amyloid beta (A4) precursor protein-binding, family A, member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5371]
55. hsh2d ENSDARG00000042908, ENSDARG00000110717 91 1 - - - - - 1.000 - - - hematopoietic SH2 domain containing [Source:ZFIN;Acc:ZDB-GENE-050410-3]
56. cyp27a7 ENSDARG00000033802 216 1 1.000 - - - - - - - - cytochrome P450, family 27, subfamily A, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-081104-519]
57. CU302326.3 CU302326.3 6 1 - - - - - 1.000 - - -
58. prf1.8 1 1 1.000 - - - - - - - - perforin 1.8
59. esr2b ENSDARG00000034181 20 1 - - - - - 1.000 - - - estrogen receptor 2b [Source:ZFIN;Acc:ZDB-GENE-030116-1]
60. oca2 ENSDARG00000061303 22 1 - - - - - 1.000 - - - oculocutaneous albinism II [Source:ZFIN;Acc:ZDB-GENE-070718-4]
61. hs6st3b ENSDARG00000069500 5 1 1.000 - - - - - - - - heparan sulfate 6-O-sulfotransferase 3b [Source:ZFIN;Acc:ZDB-GENE-070103-3]
62. zgc:171500 ENSDARG00000071553 2 1 - - - - - 1.000 - - - zgc:171500 [Source:ZFIN;Acc:ZDB-GENE-080204-9]
63. cacna1f cacna1f 1 1 - - - - - 1.000 - - -
64. axdnd1 ENSDARG00000062355 30 1 - - - - - 1.000 - - - axonemal dynein light chain domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-341]
65. si:dkeyp-72g9.5 si:dkeyp-72g9.5 1 1 1.000 - - - - - - - -
66. si:ch211-163b2.4 ENSDARG00000094890 140 1 1.000 - - - - - - - - si:ch211-163b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-502]
67. ccnd3 ENSDARG00000027391 1 1 - - 1.000 - - - - - - cyclin D3 [Source:ZFIN;Acc:ZDB-GENE-041010-110]
68. WDR6 ENSDARG00000078571 28 1 1.000 - - - - - - - - WD repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-081104-368]
69. hist2h3c_1 ENSDARG00000094154 45 1 - - - - - 1.000 - - - histone cluster 2, H3c [Source:ZFIN;Acc:ZDB-GENE-070424-8]
70. si:dkey-43k4.4 si:dkey-43k4.4 4 1 1.000 - - - - - - - -
71. nedd9 ENSDARG00000089878, ENSDARG00000116312 41 1 - - - - - 1.000 - - - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
72. si:dkey-93l1.4 ENSDARG00000094927 0 1 - - - - - 1.000 - - - si:dkey-93l1.4 [Source:ZFIN;Acc:ZDB-GENE-090311-20]
73. si:dkey-13n23.3 ENSDARG00000070465, ENSDARG00000102714 85 1 1.000 - - - - - - - - si:dkey-13n23.3 [Source:ZFIN;Acc:ZDB-GENE-120214-42]
74. serinc2l ENSDARG00000053425 5 1 1.000 - - - - - - - - serine incorporator 2, like [Source:ZFIN;Acc:ZDB-GENE-100921-58]
75. arhgap17a ENSDARG00000020488, ENSDARG00000113457 11 1 - - 1.000 - - - - - - Rho GTPase activating protein 17a [Source:ZFIN;Acc:ZDB-GENE-050417-56]
76. 5S_rRNA_11 5S_rRNA_11 1 1 - - - - - - - 1.000 -
77. FKBP15_2 FKBP15_2 40 1 - - - - - 1.000 - - -
78. zgc:55413 79 1 - - - - - 1.000 - - - zgc:55413
79. tmem168b ENSDARG00000062168 17 1 - - - - - 1.000 - - - transmembrane protein 168b [Source:ZFIN;Acc:ZDB-GENE-090406-3]
80. supt7l ENSDARG00000013461 41 1 - - - - - 1.000 - - - SPT7-like STAGA complex gamma subunit [Source:ZFIN;Acc:ZDB-GENE-050227-17]
81. TRIM35_1 TRIM35_1 11 1 - - - - - 1.000 - - -
82. ptk2ba ENSDARG00000022841 19 1 1.000 - - - - - - - - protein tyrosine kinase 2 beta, a [Source:ZFIN;Acc:ZDB-GENE-080207-1]
83. si:ch211-223g7.2 ENSDARG00000103265 1 1 - - 1.000 - - - - - - si:ch211-223g7.2 [Source:ZFIN;Acc:ZDB-GENE-050420-153]
84. gngt1 ENSDARG00000035798, ENSDARG00000116914 255 1 - - 1.000 - - - - - - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7596]
85. BX323796.1 BX323796.1 2 1 - - - - - 1.000 - - -
86. OMA1 ENSDARG00000090503 19 1 - - - - - 1.000 - - - OMA1 zinc metallopeptidase [Source:ZFIN;Acc:ZDB-GENE-091204-124]
87. VOPP1 ENSDARG00000076373 12 1 - - - - - 1.000 - - - VOPP1, WBP1/VOPP1 family member [Source:ZFIN;Acc:ZDB-GENE-091204-64]
88. ENDOD1_2 ENDOD1_2 2 1 - - - - - 1.000 - - -
89. si:ch211-117m20.4 ENSDARG00000094286 7 1 1.000 - - - - - - - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
90. gltpb ENSDARG00000077962 5 1 - - - - - - - 1.000 - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
91. sycp2 ENSDARG00000088950 3 1 1.000 - - - - - - - - synaptonemal complex protein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-237]
92. TNRC6C TNRC6C 5 1 - - - - - - - 1.000 -
93. erlec1 ENSDARG00000086309 1 1 - - 1.000 - - - - - - endoplasmic reticulum lectin 1 [Source:ZFIN;Acc:ZDB-GENE-030521-15]
94. RECK ENSDARG00000090039 15 1 - - - - - 1.000 - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
95. PTCHD2 PTCHD2 2 1 1.000 - - - - - - - -
96. NLRP1 NLRP1 54 1 1.000 - - - - - - - -
97. AFAP1L1 AFAP1L1 1 1 - - - - - - - 1.000 -
98. ABI3BP 2 1 - - - - - 1.000 - - - ABI family member 3 binding protein, transcript variant X3
99. grpr ENSDARG00000056620 66 1 1.000 - - - - - - - - gastrin-releasing peptide receptor [Source:ZFIN;Acc:ZDB-GENE-081015-4]
100. BX321875.5_1 BX321875.5_1 0 1 - - - - - 1.000 - - -

There are 829 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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