Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RP1

Gene Name Gene ID Reads Annotation
RP1 ENSDARG00000077687 6 retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]










Genes with expression patterns similar to RP1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RP1 ENSDARG00000077687 6 6 1.000 - 1.000 - 1.000 1.000 - 1.000 1.000 retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
2. SPTBN4 ENSDARG00000092624 6 2 - - 1.000 - - 1.000 - - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
3. si:dkeyp-107f9.4 ENSDARG00000104468 11 2 1.000 - - - - 1.000 - - - si:dkeyp-107f9.4 [Source:ZFIN;Acc:ZDB-GENE-120709-91]
4. got1 ENSDARG00000039093 1 2 1.000 - 1.000 - - - - - - glutamic-oxaloacetic transaminase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-2003]
5. si:dkey-24i24.3 ENSDARG00000088452 27 2 1.000 - - - - 1.000 - - - si:dkey-24i24.3 [Source:ZFIN;Acc:ZDB-GENE-110411-103]
6. CABZ01074946.1 CABZ01074946.1 119 2 1.000 - - - - 1.000 - - -
7. ft2 ENSDARG00000109567 5 2 - - 1.000 - - 1.000 - - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
8. CABZ01117474.1 CABZ01117474.1 2 2 1.000 - 1.000 - - - - - -
9. themis ENSDARG00000010619 5 2 - - 1.000 - - - - 1.000 - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
10. isg15 ENSDARG00000086374 8 2 1.000 - - - - - - 1.000 - ISG15 ubiquitin-like modifier [Source:ZFIN;Acc:ZDB-GENE-021211-1]
11. SNORA14 SNORA14 10 1.89 - - 0.890 - - 1.000 - - -
12. zgc:66024 ENSDARG00000068840, ENSDARG00000068846 37 1.835 0.835 - - - - 1.000 - - - zgc:66024 [Source:ZFIN;Acc:ZDB-GENE-040426-1511]
13. si:dkey-208k4.7 si:dkey-208k4.7 14 1.829 - - - - - - - 1.000 0.829
14. mir142a 20 1.812 - - - - 0.812 1.000 - - - microRNA 142a
15. RPS6KL1 ENSDARG00000079024 22 1.805 0.924 - - - 0.881 - - - - ribosomal protein S6 kinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-111020-10]
16. lcmt2 ENSDARG00000000747, ENSDARG00000110257 97 1.787 1.000 - - - - 0.787 - - - leucine carboxyl methyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-110714-2]
17. zgc:153116 ENSDARG00000077205 7 1.782 - - - - - 1.000 - - 0.782 zgc:153116 [Source:ZFIN;Acc:ZDB-GENE-060825-107]
18. CR848763.1 CR848763.1 9 1.782 - - - - - 1.000 - - 0.782
19. crispld1a ENSDARG00000077275 7 1.764 1.000 - - - - - - - 0.764 cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
20. nceh1a ENSDARG00000020427 35 1.764 0.764 - - - - 1.000 - - - neutral cholesterol ester hydrolase 1a [Source:ZFIN;Acc:ZDB-GENE-040711-2]
21. STPG2 ENSDARG00000061060 16 1.764 0.764 - - - - 1.000 - - - sperm-tail PG-rich repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-061013-667]
22. si:ch211-190k17.31 si:ch211-190k17.31 29 1.762 1.000 - - - - 0.762 - - -
23. cart2 ENSDARG00000045832, ENSDARG00000112535 13 1.757 - - 1.000 - - - - 0.757 - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
24. gnat1 ENSDARG00000044199 251 1.748 - - 1.000 - - - - - 0.748 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-011128-11]
25. rsph4a ENSDARG00000067606 132 1.742 1.000 - - - - 0.742 - - - radial spoke head component 4A [Source:ZFIN;Acc:ZDB-GENE-030131-7437]
26. si:dkey-25i10.5 si:dkey-25i10.5 18 1.715 0.715 - - - - 1.000 - - -
27. glmnb ENSDARG00000010958, ENSDARG00000109932 6 1.687 - - 0.923 - - - - - 0.764 glomulin, FKBP associated protein b [Source:ZFIN;Acc:ZDB-GENE-080723-14]
28. si:ch211-229i14.2 ENSDARG00000086048 19 1.673 0.903 - - - - - - - 0.770 si:ch211-229i14.2 [Source:ZFIN;Acc:ZDB-GENE-070705-123]
29. C3AR1 18 1.608 - - - - 0.737 - - 0.871 - C3a anaphylatoxin chemotactic receptor
30. gucy2f ENSDARG00000025504 6 1.554 - - 0.772 - - - - - 0.782 guanylate cyclase 2F, retinal [Source:ZFIN;Acc:ZDB-GENE-011128-7]
31. FP016207.1 FP016207.1 3 1.511 - - 0.729 - - - - - 0.782
32. mgrn1b ENSDARG00000004796 18 1.467 0.764 - - - - - - - 0.703 mahogunin, ring finger 1b [Source:ZFIN;Acc:ZDB-GENE-110401-3]
33. TRIM35_1 TRIM35_1 11 1 - - - - - 1.000 - - -
34. si:ch211-225h9.2 si:ch211-225h9.2 16 1 1.000 - - - - - - - -
35. COL9A3 ENSDARG00000037845 1 1 - - 1.000 - - - - - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
36. EXT1_1 EXT1_1 3 1 - - - - - - - 1.000 -
37. WASF3 WASF3 1 1 - - 1.000 - - - - - -
38. KSR1_1 KSR1_1 1 1 - - 1.000 - - - - - -
39. 5S_rRNA_11 5S_rRNA_11 1 1 - - - - - - - 1.000 -
40. OMA1 ENSDARG00000090503 19 1 - - - - - 1.000 - - - OMA1 zinc metallopeptidase [Source:ZFIN;Acc:ZDB-GENE-091204-124]
41. zgc:136254 ENSDARG00000068465 27 1 - - - - - 1.000 - - - zgc:136254 [Source:ZFIN;Acc:ZDB-GENE-060421-3062]
42. VSTM5 4 1 1.000 - - - - - - - - V-set and transmembrane domain containing 5
43. CABZ01068819.1 CABZ01068819.1 20 1 - - 1.000 - - - - - -
44. IMPG2 IMPG2 1 1 1.000 - - - - - - - -
45. scn1a 8 1 - - - - - 1.000 - - - sodium channel, voltage-gated, type I, alpha, transcript variant X1
46. zgc:77938 ENSDARG00000088366 74 1 1.000 - - - - - - - - zgc:77938 [Source:ZFIN;Acc:ZDB-GENE-040426-1910]
47. dio2 ENSDARG00000094857 17 1 - - - - - - - 1.000 - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
48. si:dkey-233h12.3 si:dkey-233h12.3 4 1 - - - - - - - 1.000 -
49. C20H2orf71 C20H2orf71 2 1 - - 1.000 - - - - - -
50. ZNF835 ZNF835 6 1 1.000 - - - - - - - -
51. pou1f1 ENSDARG00000058924, ENSDARG00000110816, ENSDARG00000115109 17 1 - - - - - - - 1.000 - POU class 1 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040630-7]
52. taar10b ENSDARG00000090592 0 1 - - 1.000 - - - - - - trace amine-associated receptor 10b [Source:ZFIN;Acc:ZDB-GENE-041014-67]
53. RBBP6_8 RBBP6_8 10 1 - - - - - 1.000 - - -
54. si:ch211-133l5.5 si:ch211-133l5.5 123 1 - - 1.000 - - - - - -
55. noxo1b ENSDARG00000056374 78 1 1.000 - - - - - - - - NADPH oxidase organizer 1b [Source:ZFIN;Acc:ZDB-GENE-101203-1]
56. CR847844.3 CR847844.3 1 1 1.000 - - - - - - - -
57. esr2b ENSDARG00000034181 20 1 - - - - - 1.000 - - - estrogen receptor 2b [Source:ZFIN;Acc:ZDB-GENE-030116-1]
58. MUC5AC_2 MUC5AC_2 5 1 - - - - - - - 1.000 -
59. rc3h2 ENSDARG00000063050 7 1 - - - - - 1.000 - - - ring finger and CCCH-type domains 2 [Source:ZFIN;Acc:ZDB-GENE-060503-694]
60. si:ch73-280o22.2 ENSDARG00000077072 67 1 1.000 - - - - - - - - si:ch73-280o22.2 [Source:ZFIN;Acc:ZDB-GENE-141216-272]
61. CR936540.2 CR936540.2 4 1 - - - - - - - 1.000 -
62. si:dkey-108f8.7 si:dkey-108f8.7 0 1 - - - - - - - 1.000 -
63. zgc:123060_1 5 1 - - - - - 1.000 - - - zgc:123060
64. VOPP1 ENSDARG00000076373 12 1 - - - - - 1.000 - - - VOPP1, WBP1/VOPP1 family member [Source:ZFIN;Acc:ZDB-GENE-091204-64]
65. si:ch211-114l13.12 ENSDARG00000088019 1 1 - - - - - 1.000 - - - si:ch211-114l13.12 [Source:ZFIN;Acc:ZDB-GENE-120215-211]
66. si:dkey-14o6.8 ENSDARG00000103239 3 1 - - - - - 1.000 - - - si:dkey-14o6.8 [Source:ZFIN;Acc:ZDB-GENE-110913-90]
67. si:ch211-10p21.1 si:ch211-10p21.1 6 1 - - - - - 1.000 - - -
68. si:dkey-32n7.4 ENSDARG00000002956 3 1 - - - - - 1.000 - - - si:dkey-32n7.4 [Source:ZFIN;Acc:ZDB-GENE-110411-175]
69. si:ch211-218d20.10 si:ch211-218d20.10 4 1 1.000 - - - - - - - -
70. pax7a ENSDARG00000100398, ENSDARG00000111233 37 1 1.000 - - - - - - - - paired box 7a [Source:ZFIN;Acc:ZDB-GENE-990415-201]
71. badb ENSDARG00000054937, ENSDARG00000114609 11 1 - - 1.000 - - - - - - BCL2 associated agonist of cell death b [Source:ZFIN;Acc:ZDB-GENE-000616-1]
72. ZBTB32 ENSDARG00000073726 1 1 - - - - - 1.000 - - - zinc finger and BTB domain containing 32 [Source:ZFIN;Acc:ZDB-GENE-131121-166]
73. C2 C2 5 1 - - - - - - - 1.000 -
74. c1ql3b_1 ENSDARG00000028521, ENSDARG00000036483 16 1 - - - - - 1.000 - - - complement component 1, q subcomponent-like 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1836]
75. psme2 ENSDARG00000033144 3 1 - - - - - 1.000 - - - proteasome activator subunit 2 [Source:ZFIN;Acc:ZDB-GENE-991110-16]
76. si:dkey-182i3.11 ENSDARG00000069270 3 1 - - - - - 1.000 - - - si:dkey-182i3.11 [Source:ZFIN;Acc:ZDB-GENE-121214-258]
77. C6H1orf74 C6H1orf74 53 1 - - - - - 1.000 - - -
78. PLXNA1 PLXNA1 2 1 1.000 - - - - - - - -
79. si:ch211-284e13.12 ENSDARG00000094492 0 1 - - 1.000 - - - - - - si:ch211-284e13.12 [Source:ZFIN;Acc:ZDB-GENE-060526-158]
80. si:dkey-151m22.8 ENSDARG00000095934 41 1 - - 1.000 - - - - - - si:dkey-151m22.8 [Source:ZFIN;Acc:ZDB-GENE-110411-250]
81. adam10b ENSDARG00000015502 26 1 - - 1.000 - - - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
82. si:dkey-254e13.12 si:dkey-254e13.12 1 1 - - 1.000 - - - - - -
83. smtlb ENSDARG00000017251 7 1 - - - - - - - 1.000 - somatolactin beta [Source:ZFIN;Acc:ZDB-GENE-060123-1]
84. or111-2 ENSDARG00000025658 2 1 - - - - - 1.000 - - - odorant receptor, family D, subfamily 111, member 2 [Source:ZFIN;Acc:ZDB-GENE-010308-19]
85. nr2e3 ENSDARG00000045904, ENSDARG00000113178 208 1 - - 1.000 - - - - - - nuclear receptor subfamily 2, group E, member 3 [Source:ZFIN;Acc:ZDB-GENE-041114-63]
86. kiss2 ENSDARG00000077985 2 1 1.000 - - - - - - - - kisspeptin 2 [Source:ZFIN;Acc:ZDB-GENE-090526-1]
87. PTCHD2 PTCHD2 2 1 1.000 - - - - - - - -
88. cacna1f cacna1f 1 1 - - - - - 1.000 - - -
89. admp ENSDARG00000025372 1 1 - - - - - - - 1.000 - anti-dorsalizing morphogenic protein [Source:ZFIN;Acc:ZDB-GENE-011214-1]
90. CU571170.2 CU571170.2 1 1 - - - - - - - 1.000 -
91. BX682558.1 ENSDARG00000101975 30 1 - - - - - 1.000 - - - si: dkey-225f5.4 [Source:NCBI gene;Acc:100000219]
92. si:ch211-119o8.6 ENSDARG00000026972, ENSDARG00000115846 13 1 1.000 - - - - - - - - si:ch211-119o8.6 [Source:ZFIN;Acc:ZDB-GENE-070912-17]
93. si:dkey-13n23.3 ENSDARG00000070465, ENSDARG00000102714 85 1 1.000 - - - - - - - - si:dkey-13n23.3 [Source:ZFIN;Acc:ZDB-GENE-120214-42]
94. axdnd1 ENSDARG00000062355 30 1 - - - - - 1.000 - - - axonemal dynein light chain domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-341]
95. znf384l ENSDARG00000001015 137 1 1.000 - - - - - - - - zinc finger protein 384 like [Source:ZFIN;Acc:ZDB-GENE-030616-498]
96. ccdc127a 39 1 - - - - - 1.000 - - - coiled-coil domain containing 127a, transcript variant X2
97. si:dkey-93l1.4 ENSDARG00000094927 0 1 - - - - - 1.000 - - - si:dkey-93l1.4 [Source:ZFIN;Acc:ZDB-GENE-090311-20]
98. hs6st3b ENSDARG00000069500 5 1 1.000 - - - - - - - - heparan sulfate 6-O-sulfotransferase 3b [Source:ZFIN;Acc:ZDB-GENE-070103-3]
99. PLD1 PLD1 158 1 1.000 - - - - - - - -
100. tk1 ENSDARG00000102245 1 1 - - 1.000 - - - - - - thymidine kinase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-030131-5801]

There are 829 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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