Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ROMO1

Gene Name Gene ID Reads Annotation
ROMO1 ENSGALG00000027416 9560 reactive oxygen species modulator 1 [Source:NCBI gene;Acc:768833]











Genes with expression patterns similar to ROMO1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ROMO1 ENSGALG00000027416 9560 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 reactive oxygen species modulator 1 [Source:NCBI gene;Acc:768833]
2. FOPNL ENSGALG00000006532 2922 2.28 - - 0.730 - - - 0.718 0.832 - - FGFR1OP N-terminal like [Source:NCBI gene;Acc:416598]
3. LOC770492 ENSGALG00000027778 695 1.846 - - - - 0.969 - - - - 0.877 ras-related and estrogen-regulated growth inhibitor-like
4. ALDH4A1 ENSGALG00000042184 9432 1.761 - - - - 0.944 - - 0.817 - - aldehyde dehydrogenase 4 family member A1 [Source:NCBI gene;Acc:419467]
5. POLR1B ENSGALG00000032273 3845 1.736 - - - - 0.938 - - - - 0.798 RNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]
6. SEC22B ENSGALG00000039704 16080 1.735 - - - - 0.940 - - 0.795 - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
7. GTF2B ENSGALG00000006205 6950 1.729 - - - - 0.933 - - 0.796 - - general transcription factor IIB [Source:HGNC Symbol;Acc:HGNC:4648]
8. DAP3 ENSGALG00000019796 13278 1.729 - - - - 0.972 - - - - 0.757 death associated protein 3 [Source:HGNC Symbol;Acc:HGNC:2673]
9. SMC6 ENSGALG00000016467 3321 1.723 - - - - 0.965 - - - - 0.758 Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]
10. CYB5R2 ENSGALG00000032372 7967 1.722 - - - - 0.945 - 0.777 - - - cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
11. MPRIP ENSGALG00000004798 6700 1.715 - - - - 0.945 - - - - 0.770 myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
12. CKAP2 ENSGALG00000017025 25020 1.705 - - - - 0.877 - - - - 0.828 cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
13. SERINC1 ENSGALG00000014868 12484 1.703 - - - - 0.912 - - - - 0.791 serine incorporator 1 [Source:NCBI gene;Acc:421722]
14. TXNDC11 ENSGALG00000003154 2224 1.701 - - - - 0.956 - - - - 0.745 thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
15. FZD6 ENSGALG00000030626 3336 1.696 - - - - 0.967 - - - - 0.729 frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
16. TMEM97 ENSGALG00000005702 2037 1.694 - - 0.727 - 0.967 - - - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
17. TMEM184C ENSGALG00000010019 7856 1.694 - - - - 0.972 - - - - 0.722 transmembrane protein 184C [Source:NCBI gene;Acc:422469]
18. CRCP ENSGALG00000002587 8809 1.682 - - - - 0.967 - - - - 0.715 CGRP receptor component [Source:NCBI gene;Acc:396022]
19. CTSL2 CTSL2 7966 1.673 - - - - 0.941 - 0.732 - - -
20. TCEA2 ENSGALG00000005976 9143 1.669 - - - - 0.930 - 0.739 - - - transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614]
21. COG6 ENSGALG00000017035 2777 1.668 - - - - 0.956 - - - - 0.712 component of oligomeric golgi complex 6 [Source:HGNC Symbol;Acc:HGNC:18621]
22. ZFR ENSGALG00000003235 8466 1.666 - - - - 0.889 - - - - 0.777 zinc finger RNA binding protein, transcript variant X3
23. AIMP1 ENSGALG00000010553 17994 1.663 - - - - 0.919 - - - - 0.744 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 [Source:HGNC Symbol;Acc:HGNC:10648]
24. TIMM10 ENSGALG00000004845 31395 1.653 - - 0.707 - 0.946 - - - - - translocase of inner mitochondrial membrane 10 [Source:NCBI gene;Acc:425202]
25. PWP1 ENSGALG00000012631 10536 1.651 - - - - 0.946 - - - - 0.705 PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
26. CASP3 ENSGALG00000010638 11572 1.633 - - - - 0.921 - 0.712 - - - caspase 3 [Source:NCBI gene;Acc:395476]
27. DAPK3 ENSGALG00000037733 6215 1.625 - - 0.751 - 0.874 - - - - - death-associated protein kinase 3, transcript variant X2
28. DBI ENSGALG00000012112 6910 1.613 - - - - 0.907 - 0.706 - - - diazepam binding inhibitor, acyl-CoA binding protein [Source:NCBI gene;Acc:395263]
29. RBM27 ENSGALG00000007516 3909 1.613 - - - - - - 0.792 0.821 - - RNA binding motif protein 27, transcript variant X3
30. C1H12ORF23 C1H12ORF23 13234 1.573 - - - - - - 0.756 0.817 - -
31. LSM6 ENSGALG00000009985 18582 1.564 - - - - - - 0.815 - - 0.749 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
32. FANCL ENSGALG00000030022 7423 1.556 - - - - - - 0.752 - - 0.804 FA complementation group L [Source:NCBI gene;Acc:421202]
33. WDR53 ENSGALG00000006395 4938 1.544 - - - - - - - 0.805 - 0.739 WD repeat domain 53 [Source:HGNC Symbol;Acc:HGNC:28786]
34. HNRNPD ENSGALG00000011184 10686 1.539 - - - - - - 0.705 - - 0.834 heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
35. SMC4 ENSGALG00000009553 15715 1.538 - - - - - - 0.817 - - 0.721 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
36. FRMD3 ENSGALG00000012577 999 1.535 - - 0.752 - - - - - - 0.783 FERM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24125]
37. STX2 ENSGALG00000002536 10438 1.521 - - - - 0.769 - - - - 0.752 syntaxin 2 [Source:NCBI gene;Acc:378895]
38. ENSGALG00000009044 ENSGALG00000009044 14492 1.51 - - - - - - 0.766 - - 0.744
39. CCT8 ENSGALG00000015821 12161 1.505 - - 0.728 - - - - - - 0.777 chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
40. NLGN1 ENSGALG00000040938 651 1.494 - - 0.707 - - - - - - 0.787 neuroligin 1 [Source:NCBI gene;Acc:424980]
41. MRPL46 ENSGALG00000006782 5033 1.493 - - 0.782 - - - 0.711 - - - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
42. MRPL50 ENSGALG00000015543 11649 1.484 - - - - - - 0.728 - - 0.756 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
43. PPA2 ENSGALG00000010582 22301 1.469 - - - - 0.751 - - - - 0.718 pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
44. KHDRBS1 ENSGALG00000003272 4249 1.458 - - - - - - 0.749 - - 0.709 KH RNA binding domain containing, signal transduction associated 1 [Source:NCBI gene;Acc:374071]
45. NEO1 ENSGALG00000001774 10165 1.449 - - - - - - 0.725 - - 0.724 neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
46. GTPBP4 ENSGALG00000006703 16183 1.415 - - - - - - 0.701 - - 0.714 GTP binding protein 4 [Source:NCBI gene;Acc:420458]
47. LLPH ENSGALG00000019358 20976 1.414 - - 0.700 - - - 0.714 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
48. NQO2 ENSGALG00000025747 2287 0.974 - - - - 0.974 - - - - - N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856]
49. KLF3 ENSGALG00000041717 2787 0.973 - - - - 0.973 - - - - - Kruppel like factor 3 [Source:HGNC Symbol;Acc:HGNC:16516]
50. CGT CGT 948 0.972 - - - - 0.972 - - - - -
51. TEL TEL 1231 0.972 - - - - 0.972 - - - - -
52. PRKCD ENSGALG00000002016 1476 0.972 - - - - 0.972 - - - - - protein kinase C delta [Source:NCBI gene;Acc:415905]
53. DNAJA1 ENSGALG00000023066 3820 0.97 - - - - 0.970 - - - - - DnaJ heat shock protein family (Hsp40) member A1 [Source:NCBI gene;Acc:427376]
54. BBS2 ENSGALG00000042415 1816 0.97 - - - - 0.970 - - - - - Bardet-Biedl syndrome 2 [Source:NCBI gene;Acc:415694]
55. TMEM203 ENSGALG00000008925 3033 0.97 - - - - 0.970 - - - - - transmembrane protein 203 [Source:HGNC Symbol;Acc:HGNC:28217]
56. RAB23 ENSGALG00000016279 597 0.969 - - - - 0.969 - - - - - ras-related protein Rab-23 [Source:NCBI gene;Acc:421879]
57. ZNF318 ENSGALG00000034040 1758 0.969 - - - - 0.969 - - - - - zinc finger protein 318 [Source:HGNC Symbol;Acc:HGNC:13578]
58. DRD2 ENSGALG00000007794 399 0.969 - - - - 0.969 - - - - - dopamine receptor D2 [Source:NCBI gene;Acc:428252]
59. AP1S3 ENSGALG00000005171 2981 0.969 - - - - 0.969 - - - - - adaptor related protein complex 1 subunit sigma 3 [Source:NCBI gene;Acc:424807]
60. REXO5 ENSGALG00000002239 2466 0.969 - - - - 0.969 - - - - - RNA exonuclease 5 [Source:NCBI gene;Acc:427001]
61. FANCM ENSGALG00000031182 1030 0.968 - - - - 0.968 - - - - - FA complementation group M [Source:HGNC Symbol;Acc:HGNC:23168]
62. DHX33 ENSGALG00000001630 7783 0.968 - - - - 0.968 - - - - - DEAH-box helicase 33 [Source:HGNC Symbol;Acc:HGNC:16718]
63. ARPP21 ENSGALG00000043240 2403 0.968 - - - - 0.968 - - - - - cAMP regulated phosphoprotein 21 [Source:HGNC Symbol;Acc:HGNC:16968]
64. ERICH1 ENSGALG00000031021 1495 0.968 - - - - 0.968 - - - - - glutamate rich 1 [Source:NCBI gene;Acc:421904]
65. TCERG1L ENSGALG00000010470 490 0.968 - - - - 0.968 - - - - - transcription elongation regulator 1 like [Source:HGNC Symbol;Acc:HGNC:23533]
66. IL4RA IL4RA 1237 0.968 - - - - 0.968 - - - - -
67. COQ3 ENSGALG00000015486 3508 0.968 - - - - 0.968 - - - - - coenzyme Q3, methyltransferase [Source:HGNC Symbol;Acc:HGNC:18175]
68. ZBTB8OS ENSGALG00000003517 2436 0.968 - - - - 0.968 - - - - - zinc finger and BTB domain containing 8 opposite strand [Source:HGNC Symbol;Acc:HGNC:24094]
69. CALCA CALCA 682 0.968 - - - - 0.968 - - - - -
70. Sep-11 Sep-11 2005 0.968 - - - - 0.968 - - - - -
71. ADPGK ENSGALG00000001788 208 0.967 - - - - 0.967 - - - - - ADP dependent glucokinase [Source:NCBI gene;Acc:415317]
72. TAF13 ENSGALG00000015185 11410 0.967 - - - - 0.967 - - - - - TATA-box binding protein associated factor 13 [Source:NCBI gene;Acc:418365]
73. PLS3 ENSGALG00000005930 12625 0.967 - - - - 0.967 - - - - - plastin 3 [Source:NCBI gene;Acc:422222]
74. ATP5J 14451 0.966 - - - - 0.966 - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6, transcript variant X2
75. ALDH18A1 ENSGALG00000034655 3038 0.966 - - - - 0.966 - - - - - aldehyde dehydrogenase 18 family member A1, transcript variant X13
76. IFT172 ENSGALG00000016509 1226 0.966 - - - - 0.966 - - - - - intraflagellar transport 172 [Source:HGNC Symbol;Acc:HGNC:30391]
77. PLA2G12A ENSGALG00000012185 5261 0.966 - - - - 0.966 - - - - - phospholipase A2 group XIIA [Source:HGNC Symbol;Acc:HGNC:18554]
78. OGFOD3 ENSGALG00000001618 2438 0.966 - - - - 0.966 - - - - - 2-oxoglutarate and iron dependent oxygenase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26174]
79. GLI2 ENSGALG00000011630 3347 0.965 - - - - 0.965 - - - - - GLI family zinc finger 2 [Source:NCBI gene;Acc:395956]
80. VCPKMT ENSGALG00000012269 2107 0.964 - - - - 0.964 - - - - - valosin containing protein lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:20352]
81. ITPA ENSGALG00000003250 7722 0.964 - - - - 0.964 - - - - - inosine triphosphatase [Source:NCBI gene;Acc:424390]
82. ZZZ3 ENSGALG00000008988 3132 0.963 - - - - 0.963 - - - - - zinc finger ZZ-type containing 3, transcript variant X5
83. RNF207 2949 0.962 - - - - 0.962 - - - - - ring finger protein 207, transcript variant X1
84. EXOSC3 ENSGALG00000002426 7255 0.962 - - - - 0.962 - - - - - exosome component 3 [Source:NCBI gene;Acc:423626]
85. DLGAP5 ENSGALG00000012165 2406 0.962 - - - - 0.962 - - - - - DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]
86. ROCK1 ENSGALG00000014922 4020 0.962 - - - - 0.962 - - - - - Rho-associated, coiled-coil containing protein kinase 1 [Source:NCBI gene;Acc:373970]
87. MICALL1 ENSGALG00000012265 3753 0.962 - - - - 0.962 - - - - - MICAL like 1 [Source:NCBI gene;Acc:418032]
88. SLC25A15 ENSGALG00000017032 6773 0.961 - - - - 0.961 - - - - - solute carrier family 25 member 15 [Source:NCBI gene;Acc:418886]
89. HMGN1 ENSGALG00000016067 17375 0.961 - - - - 0.961 - - - - - high mobility group nucleosome binding domain 1 [Source:NCBI gene;Acc:395999]
90. PEX2 ENSGALG00000035752 4427 0.961 - - - - 0.961 - - - - - peroxisomal biogenesis factor 2 [Source:NCBI gene;Acc:420192]
91. RASA2 ENSGALG00000002850 2231 0.96 - - - - 0.960 - - - - - RAS p21 protein activator 2 [Source:NCBI gene;Acc:424782]
92. ATAD5 ENSGALG00000003294 4830 0.96 - - - - 0.960 - - - - - ATPase family, AAA domain containing 5 [Source:NCBI gene;Acc:417408]
93. UTP3 ENSGALG00000011553 8814 0.96 - - - - 0.960 - - - - - UTP3, small subunit processome component homolog (S. cerevisiae)
94. METTL25 1538 0.96 - - - - 0.960 - - - - - methyltransferase like 25, transcript variant X1
95. MKKS ENSGALG00000009013 9301 0.96 - - - - 0.960 - - - - - McKusick-Kaufman syndrome [Source:NCBI gene;Acc:416737]
96. RPAP3 ENSGALG00000009743 3380 0.959 - - - - 0.959 - - - - - RNA polymerase II associated protein 3 [Source:NCBI gene;Acc:417811]
97. NUP188 ENSGALG00000043394 9288 0.959 - - - - 0.959 - - - - - nucleoporin 188 [Source:NCBI gene;Acc:417198]
98. DPCD ENSGALG00000007731 7225 0.959 - - - - 0.959 - - - - - deleted in primary ciliary dyskinesia homolog (mouse) [Source:NCBI gene;Acc:423852]
99. GALNTL4 GALNTL4 3548 0.958 - - - - 0.958 - - - - -
100. TMX4 ENSGALG00000028587 3513 0.957 - - - - 0.957 - - - - - thioredoxin related transmembrane protein 4 [Source:NCBI gene;Acc:416729]

There are 718 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA