Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RNPS1

Gene Name Gene ID Reads Annotation
RNPS1 ENSGALG00000009288 13588 RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]











Genes with expression patterns similar to RNPS1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RNPS1 ENSGALG00000009288 13588 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]
2. CDC42BPA ENSGALG00000009158 3926 2.13 - - 0.712 - - - 0.716 0.702 - - CDC42 binding protein kinase alpha [Source:NCBI gene;Acc:416746]
3. DLD ENSGALG00000007931 11011 1.607 - - - - - - 0.743 0.864 - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
4. API5 ENSGALG00000037968 18265 1.562 - - 0.768 - - - 0.794 - - - apoptosis inhibitor 5 [Source:NCBI gene;Acc:423168]
5. TGIF1 ENSGALG00000014795 2378 1.554 - - 0.816 - - - 0.738 - - - TGFB induced factor homeobox 1 [Source:NCBI gene;Acc:396339]
6. UBE2D1 ENSGALG00000021213 5876 1.554 - - - - - - 0.834 0.720 - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
7. JMJD6 ENSGALG00000001802 5169 1.542 - - 0.715 - - - 0.827 - - - jumonji domain containing 6 [Source:NCBI gene;Acc:417355]
8. GGA.1330 GGA.1330 11281 1.536 - - - - - - 0.723 0.813 - -
9. RSL1D1 ENSGALG00000033690 13638 1.532 - - 0.751 - - - 0.781 - - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
10. HPCAL1 ENSGALG00000016443 6633 1.512 - - - - - - 0.808 0.704 - - hippocalcin like 1 [Source:NCBI gene;Acc:396161]
11. WDR44 ENSGALG00000005997 4548 1.512 - - 0.714 - - - 0.798 - - - WD repeat domain 44 [Source:NCBI gene;Acc:422227]
12. CLN8 ENSGALG00000039606 4209 1.503 - - 0.728 - - - 0.775 - - - CLN8, transmembrane ER and ERGIC protein [Source:NCBI gene;Acc:421902]
13. SALL4 ENSGALG00000041365 6760 1.496 - - 0.713 - - - 0.783 - - - spalt like transcription factor 4 [Source:NCBI gene;Acc:769286]
14. C1orf174 ENSGALG00000000975 4947 1.491 - - 0.707 - - - 0.784 - - - chromosome 1 open reading frame 174 [Source:HGNC Symbol;Acc:HGNC:27915]
15. CTNNBIP1 ENSGALG00000026306 8049 1.479 - - 0.736 - - - 0.743 - - - catenin beta interacting protein 1 [Source:NCBI gene;Acc:771460]
16. NDUFAF2 ENSGALG00000027564 7302 1.479 - - 0.771 - - - 0.708 - - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:NCBI gene;Acc:769549]
17. SH3GLB1 ENSGALG00000006284 12764 1.479 - - 0.727 - - - 0.752 - - - SH3 domain containing GRB2 like endophilin B1 [Source:NCBI gene;Acc:424522]
18. TSC22D2 ENSGALG00000027591 6594 1.472 - - - - - - 0.765 0.707 - - TSC22 domain family member 2 [Source:HGNC Symbol;Acc:HGNC:29095]
19. GUK1 ENSGALG00000005336 5134 1.466 - - 0.759 - - - 0.707 - - - guanylate kinase 1 [Source:HGNC Symbol;Acc:HGNC:4693]
20. CHMP6 ENSGALG00000026428 18026 1.465 - - - - - - 0.758 0.707 - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
21. GNS ENSGALG00000009856 3045 1.456 - - 0.723 - - - 0.733 - - - glucosamine (N-acetyl)-6-sulfatase [Source:NCBI gene;Acc:417829]
22. FBXW5 ENSGALG00000030831 5927 1.454 - - 0.716 - - - 0.738 - - - F-box and WD repeat domain containing 5 [Source:NCBI gene;Acc:417289]
23. TXNDC5 ENSGALG00000012784 4678 1.444 - - - - - - 0.740 0.704 - - thioredoxin domain containing 5 [Source:NCBI gene;Acc:420867]
24. PPCS ENSGALG00000004882 5759 1.442 - - - - - - 0.741 0.701 - - phosphopantothenoylcysteine synthetase [Source:HGNC Symbol;Acc:HGNC:25686]
25. SCO1 ENSGALG00000030475 7304 1.439 - - - - - - 0.713 0.726 - - SCO1, cytochrome c oxidase assembly protein [Source:HGNC Symbol;Acc:HGNC:10603]
26. AHCTF1 ENSGALG00000010630 4809 1.434 - - - - - - 0.729 0.705 - - AT-hook containing transcription factor 1 [Source:NCBI gene;Acc:421484]
27. PGAM5 ENSGALG00000002137 7700 1.434 - - - - - - 0.724 0.710 - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
28. NOVA1 ENSGALG00000009850 7584 1.427 - - 0.715 - - - 0.712 - - - uncharacterized LOC423300 [Source:NCBI gene;Acc:423300]
29. ERGIC2 ENSGALG00000007183 12870 1.424 - - - - - - 0.706 0.718 - - ERGIC and golgi 2 [Source:NCBI gene;Acc:417697]
30. USP6NL ENSGALG00000035563 2202 0.919 - - - - - - - 0.919 - - USP6 N-terminal like [Source:NCBI gene;Acc:419104]
31. SLC35E2B 7675 0.914 - - - - - - - 0.914 - - solute carrier family 35 member E2B
32. NUDT1 ENSGALG00000004245 9034 0.903 - - - - - - - 0.903 - - nudix hydrolase 1 [Source:NCBI gene;Acc:416467]
33. NEK6 ENSGALG00000001118 20333 0.902 - - - - - - 0.902 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
34. SLC10A7 ENSGALG00000010006 2064 0.901 - - - - - - - 0.901 - - solute carrier family 10 member 7 [Source:NCBI gene;Acc:422467]
35. GABPA ENSGALG00000015763 11567 0.89 - - - - - - - 0.890 - - GA binding protein transcription factor subunit alpha [Source:NCBI gene;Acc:418478]
36. NUP50 ENSGALG00000014222 11743 0.89 - - - - - - 0.890 - - - nucleoporin 50 [Source:NCBI gene;Acc:418240]
37. ACAT2 ENSGALG00000011659 12825 0.889 - - - - - - - 0.889 - - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
38. DGCR2 ENSGALG00000005891 8405 0.888 - - - - - - 0.888 - - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
39. WBSCR16 WBSCR16 2248 0.888 - - - - - - - 0.888 - -
40. DNAJC7 ENSGALG00000042796 14597 0.881 - - - - - - - 0.881 - - DnaJ heat shock protein family (Hsp40) member C7 [Source:NCBI gene;Acc:428312]
41. RUVBL1 ENSGALG00000005931 9379 0.879 - - - - - - 0.879 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
42. DDX19B ENSGALG00000039967 49600 0.877 - - - - - - 0.877 - - - ATP-dependent RNA helicase DDX19B [Source:NCBI gene;Acc:426504]
43. NDUFS6 ENSGALG00000013191 15874 0.876 - - - - - - - 0.876 - - NADH:ubiquinone oxidoreductase subunit S6 [Source:HGNC Symbol;Acc:HGNC:7713]
44. PIK3IP1 ENSGALG00000006942 8388 0.875 - - - - - - 0.875 - - - phosphoinositide-3-kinase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:24942]
45. WDR43 ENSGALG00000032529 12235 0.875 - - - - - - 0.875 - - - WD repeat domain 43 [Source:NCBI gene;Acc:421295]
46. LIMD2 ENSGALG00000000529 30617 0.872 - - - - - - 0.872 - - - LIM domain containing 2 [Source:NCBI gene;Acc:419955]
47. CASK ENSGALG00000042400 8485 0.87 - - - - - - 0.870 - - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
48. VBP1 VBP1 14482 0.868 - - - - - - 0.868 - - -
49. IFRD1 ENSGALG00000009448 8865 0.867 - - - - - - 0.867 - - - interferon related developmental regulator 1 [Source:NCBI gene;Acc:395226]
50. PDDC1 5179 0.866 - - - - - - 0.866 - - - Parkinson disease 7 domain containing 1, transcript variant X6
51. AGFG1 ENSGALG00000003052 4766 0.864 - - - - - - 0.864 - - - ArfGAP with FG repeats 1 [Source:HGNC Symbol;Acc:HGNC:5175]
52. ILF2 ENSGALG00000011570 23050 0.858 - - - - - - 0.858 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
53. PFKFB3 ENSGALG00000040369 2119 0.856 - - 0.856 - - - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:HGNC Symbol;Acc:HGNC:8874]
54. PPP1R2 ENSGALG00000029789 11594 0.855 - - - - - - 0.855 - - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
55. TFB2M ENSGALG00000010651 4374 0.853 - - - - - - 0.853 - - - transcription factor B2, mitochondrial
56. TBCD ENSGALG00000001503 7880 0.852 - - - - - - 0.852 - - - tubulin folding cofactor D [Source:NCBI gene;Acc:417334]
57. EVL ENSGALG00000011209 5440 0.851 - - - - - - 0.851 - - - Enah/Vasp-like [Source:NCBI gene;Acc:423453]
58. YWHAE ENSGALG00000002661 37143 0.85 - - - - - - - 0.850 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon [Source:NCBI gene;Acc:417554]
59. ZNHIT3 ENSGALG00000026031 8652 0.85 - - - - - - 0.850 - - - zinc finger HIT-type containing 3 [Source:HGNC Symbol;Acc:HGNC:12309]
60. PSMC3 ENSGALG00000008108 22922 0.848 - - - - - - 0.848 - - - proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
61. NOC4L ENSGALG00000002272 9644 0.848 - - - - - - 0.848 - - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
62. PAPSS1 ENSGALG00000010542 5631 0.846 - - - - - - 0.846 - - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:8603]
63. SPCS1 ENSGALG00000001655 7718 0.846 - - - - - - 0.846 - - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
64. SF3A2 ENSGALG00000021679 12580 0.845 - - - - - - 0.845 - - - splicing factor 3a subunit 2 [Source:NCBI gene;Acc:420077]
65. APIP ENSGALG00000031286 6838 0.844 - - - - - - 0.844 - - - APAF1 interacting protein [Source:NCBI gene;Acc:428860]
66. TMEM70 ENSGALG00000033568 10720 0.843 - - - - - - 0.843 - - - transmembrane protein 70 [Source:NCBI gene;Acc:420188]
67. ASUN ASUN 17129 0.843 - - - - - - 0.843 - - -
68. FTSJ2 FTSJ2 2951 0.843 - - 0.843 - - - - - - -
69. PSMB2 ENSGALG00000026421 51885 0.842 - - - - - - 0.842 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
70. CHN1 ENSGALG00000009293 6415 0.842 - - - - - - 0.842 - - - chimerin 1 [Source:NCBI gene;Acc:429021]
71. C1QBP ENSGALG00000001654 34814 0.841 - - - - - - 0.841 - - - complement C1q binding protein [Source:HGNC Symbol;Acc:HGNC:1243]
72. NASP ENSGALG00000010255 28423 0.84 - - - - - - 0.840 - - - nuclear autoantigenic sperm protein, transcript variant X3
73. ANAPC1 ENSGALG00000008254 2519 0.84 - - - - - - 0.840 - - - anaphase promoting complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:19988]
74. STX16 ENSGALG00000007541 6458 0.839 - - - - - - 0.839 - - - syntaxin 16 [Source:NCBI gene;Acc:419315]
75. TMEM184C ENSGALG00000010019 7856 0.839 - - - - - - 0.839 - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
76. LSM5 ENSGALG00000041625 22307 0.838 - - - - - - 0.838 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
77. EIF2B3 ENSGALG00000010140 7992 0.838 - - - - - - 0.838 - - - eukaryotic translation initiation factor 2B subunit gamma [Source:NCBI gene;Acc:424587]
78. MED17 ENSGALG00000017218 5821 0.836 - - - - - - 0.836 - - - mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
79. SNRNP40 ENSGALG00000000615 32298 0.835 - - - - - - 0.835 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
80. NUP54 ENSGALG00000011506 4945 0.835 - - - - - - 0.835 - - - nucleoporin 54 [Source:HGNC Symbol;Acc:HGNC:17359]
81. GLI3 ENSGALG00000040266 9981 0.834 - - - - - - 0.834 - - - GLI family zinc finger 3 [Source:NCBI gene;Acc:420769]
82. HSPA4 ENSGALG00000040882 20966 0.834 - - - - - - 0.834 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
83. SNRNP27 ENSGALG00000013883 22212 0.834 - - - - - - 0.834 - - - small nuclear ribonucleoprotein U4/U6.U5 subunit 27 [Source:HGNC Symbol;Acc:HGNC:30240]
84. MRPS30 ENSGALG00000014874 3416 0.834 - - - - - - 0.834 - - - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
85. INCENP ENSGALG00000007537 16617 0.833 - - - - - - 0.833 - - - inner centromere protein [Source:NCBI gene;Acc:396270]
86. MLST8 ENSGALG00000005878 8116 0.833 - - - - - - 0.833 - - - MTOR associated protein, LST8 homolog [Source:HGNC Symbol;Acc:HGNC:24825]
87. CIR1 ENSGALG00000014276 7189 0.833 - - - - - - 0.833 - - - corepressor interacting with RBPJ, 1 [Source:NCBI gene;Acc:426529]
88. RIOK3 ENSGALG00000015004 4249 0.833 - - - - - - 0.833 - - - RIO kinase 3 [Source:HGNC Symbol;Acc:HGNC:11451]
89. ATG3 ENSGALG00000015204 11277 0.832 - - - - - - 0.832 - - - autophagy related 3 [Source:NCBI gene;Acc:418369]
90. HAS2 ENSGALG00000029596 4192 0.832 - - - - - - - 0.832 - - hyaluronan synthase 2 [Source:NCBI gene;Acc:395594]
91. EPFIP1L ENSGALG00000007683 18050 0.83 - - - - - - 0.830 - - - re-mRNA 3'-end-processing factor FIP1-like, transcript variant X2
92. HERC2 ENSGALG00000016739 9900 0.83 - - - - - - 0.830 - - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:418682]
93. NDUFV2 ENSGALG00000036625 29234 0.83 - - - - - - 0.830 - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]
94. GNAI2 ENSGALG00000035645 9535 0.83 - - - - - - 0.830 - - - G protein subunit alpha i2 [Source:HGNC Symbol;Acc:HGNC:4385]
95. NUPL1 NUPL1 8197 0.829 - - - - - - 0.829 - - -
96. CDC23 ENSGALG00000007610 11945 0.829 - - - - - - 0.829 - - - cell division cycle 23 [Source:HGNC Symbol;Acc:HGNC:1724]
97. KDM3B ENSGALG00000007663 7189 0.829 - - - - - - 0.829 - - - lysine demethylase 3B [Source:HGNC Symbol;Acc:HGNC:1337]
98. DKC1 ENSGALG00000005054 30350 0.829 - - - - - - 0.829 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
99. VAMP4 ENSGALG00000031381 4289 0.828 - - 0.828 - - - - - - - vesicle associated membrane protein 4 [Source:HGNC Symbol;Acc:HGNC:12645]
100. CCDC12 ENSGALG00000005487 8190 0.828 - - - - - - 0.828 - - - coiled-coil domain containing 12 [Source:NCBI gene;Acc:420402]

There are 877 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA