Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RNFT1

Gene Name Gene ID Reads Annotation
RNFT1 ENSGALG00000005205 2888 ring finger protein, transmembrane 1 [Source:HGNC Symbol;Acc:HGNC:30206]











Genes with expression patterns similar to RNFT1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RNFT1 ENSGALG00000005205 2888 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ring finger protein, transmembrane 1 [Source:HGNC Symbol;Acc:HGNC:30206]
2. PDHB ENSGALG00000029576 12254 1.826 - - - - - - 0.838 0.988 - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
3. CDCA7 ENSGALG00000040833 7484 1.794 - - - - - - 0.801 0.993 - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
4. TMEM126A ENSGALG00000014066 6149 1.755 - - - - - - 0.759 0.996 - - transmembrane protein 126A [Source:HGNC Symbol;Acc:HGNC:25382]
5. TNFAIP8L1 ENSGALG00000004266 12611 1.725 - - - - - - 0.823 0.902 - - TNF alpha induced protein 8 like 1 [Source:NCBI gene;Acc:420162]
6. RCOR3 ENSGALG00000009871 7022 1.696 - - - - - - 0.700 0.996 - - REST corepressor 3 [Source:NCBI gene;Acc:421380]
7. CTDP1 ENSGALG00000031461 4818 1.467 - - - - - - 0.708 0.759 - - CTD phosphatase subunit 1 [Source:HGNC Symbol;Acc:HGNC:2498]
8. CRELD2 ENSGALG00000008551 2084 0.999 - - - - - - - 0.999 - - cysteine rich with EGF like domains 2 [Source:NCBI gene;Acc:417735]
9. ATP2B4 ENSGALG00000003601 3746 0.998 - - - - - - - 0.998 - - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
10. ENSGALG00000012250 ENSGALG00000012250 581 0.998 - - - - - - - 0.998 - -
11. PIGL ENSGALG00000004492 669 0.998 - - - - - - - 0.998 - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
12. RNF168 ENSGALG00000006392 507 0.998 - - - - - - - 0.998 - - ring finger protein 168 [Source:HGNC Symbol;Acc:HGNC:26661]
13. ELAVL4 ENSGALG00000010533 4978 0.998 - - - - - - - 0.998 - - ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
14. SNIP1 ENSGALG00000002010 1429 0.998 - - - - - - - 0.998 - - Smad nuclear interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:30587]
15. ZNF319 ENSGALG00000000999 1272 0.998 - - - - - - - 0.998 - - zinc finger protein 319 [Source:HGNC Symbol;Acc:HGNC:13644]
16. RFT1 ENSGALG00000001945 2446 0.998 - - - - - - - 0.998 - - RFT1 homolog [Source:NCBI gene;Acc:770487]
17. CENPL ENSGALG00000038411 4867 0.998 - - - - - - - 0.998 - - centromere protein L [Source:NCBI gene;Acc:426563]
18. SPDYA ENSGALG00000017392 503 0.998 - - - - - - - 0.998 - - speedy/RINGO cell cycle regulator family member A [Source:HGNC Symbol;Acc:HGNC:30613]
19. TMEM192 ENSGALG00000009528 2428 0.998 - - - - - - - 0.998 - - transmembrane protein 192 [Source:HGNC Symbol;Acc:HGNC:26775]
20. FBF1 ENSGALG00000002179 1738 0.998 - - - - - - - 0.998 - - Fas binding factor 1 [Source:NCBI gene;Acc:770159]
21. C6ORF192 C6ORF192 4224 0.997 - - - - - - - 0.997 - -
22. NVL ENSGALG00000009322 5286 0.997 - - - - - - - 0.997 - - nuclear VCP-like [Source:NCBI gene;Acc:421326]
23. SLC35D1 ENSGALG00000011121 4456 0.997 - - - - - - - 0.997 - - solute carrier family 35 member D1 [Source:HGNC Symbol;Acc:HGNC:20800]
24. PDCD6IP ENSGALG00000033500 580 0.997 - - - - - - - 0.997 - - programmed cell death 6 interacting protein [Source:NCBI gene;Acc:420725]
25. RAI2 ENSGALG00000016538 1074 0.997 - - - - - - - 0.997 - - retinoic acid induced 2 [Source:HGNC Symbol;Acc:HGNC:9835]
26. PMP22 ENSGALG00000031425 5358 0.997 - - - - - - - 0.997 - - peripheral myelin protein 22 [Source:NCBI gene;Acc:417327]
27. FUNDC2 ENSGALG00000029585 9334 0.996 - - - - - - - 0.996 - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
28. ALS2 ENSGALG00000008415 2576 0.996 - - - - - - - 0.996 - - ALS2, alsin Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:443]
29. CETN1 ENSGALG00000026741 7243 0.996 - - - - - - - 0.996 - - centrin 1 [Source:NCBI gene;Acc:422668]
30. ATE1 ENSGALG00000009502 3751 0.996 - - - - - - - 0.996 - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
31. MAP2K2 ENSGALG00000001267 3857 0.995 - - - - - - - 0.995 - - mitogen-activated protein kinase kinase 2 [Source:NCBI gene;Acc:396349]
32. NBL1 ENSGALG00000040297 8165 0.995 - - - - - - - 0.995 - - neuroblastoma 1, DAN family BMP antagonist [Source:NCBI gene;Acc:373952]
33. DLC1 ENSGALG00000013715 5297 0.993 - - - - - - - 0.993 - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
34. CRNKL1 ENSGALG00000008429 7280 0.993 - - - - - - - 0.993 - - crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
35. PPM1D ENSGALG00000035610 6530 0.993 - - - - - - - 0.993 - - protein phosphatase, Mg2+/Mn2+ dependent 1D [Source:HGNC Symbol;Acc:HGNC:9277]
36. TTL ENSGALG00000008614 3991 0.992 - - - - - - - 0.992 - - tubulin tyrosine ligase [Source:NCBI gene;Acc:416711]
37. IFNAR2 ENSGALG00000041867 1596 0.991 - - - - - - - 0.991 - - interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
38. PPP3R1 ENSGALG00000023648 3417 0.991 - - - - - - - 0.991 - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
39. RBM7 ENSGALG00000007017 8779 0.99 - - - - - - - 0.990 - - RNA binding motif protein 7 [Source:NCBI gene;Acc:419760]
40. YAF2 ENSGALG00000009540 8452 0.99 - - - - - - - 0.990 - - YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
41. G3BP2 ENSGALG00000010882 21129 0.989 - - - - - - - 0.989 - - G3BP stress granule assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:30291]
42. gga-mir-6587 ENSGALG00000026386 9441 0.985 - - - - - - - 0.985 - - gga-mir-6587 [Source:miRBase;Acc:MI0022407]
43. EXO1 ENSGALG00000010748 7572 0.985 - - - - - - - 0.985 - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
44. JSC JSC 7982 0.979 - - - - - - - 0.979 - -
45. RFC3 ENSGALG00000017064 7011 0.973 - - - - - - - 0.973 - - replication factor C subunit 3 [Source:NCBI gene;Acc:418907]
46. KIAA0196 KIAA0196 4011 0.97 - - - - - - - 0.970 - -
47. COX7A2L ENSGALG00000037996 13646 0.97 - - - - - - - 0.970 - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
48. XPO5 ENSGALG00000010341 24765 0.966 - - - - - - - 0.966 - - exportin 5 [Source:NCBI gene;Acc:421450]
49. GARS ENSGALG00000005694 18264 0.965 - - - - - - - 0.965 - - glycyl-tRNA synthetase [Source:NCBI gene;Acc:428403]
50. AP2B1 ENSGALG00000042125 13229 0.964 - - - - - - - 0.964 - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
51. NUP107 ENSGALG00000009934 2097 0.962 - - - - - - - 0.962 - - nucleoporin 107 [Source:NCBI gene;Acc:101751988]
52. SBNO1 ENSGALG00000003392 6731 0.961 - - - - - - - 0.961 - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
53. INPP5A ENSGALG00000010493 6769 0.96 - - - - - - - 0.960 - - inositol polyphosphate-5-phosphatase A [Source:HGNC Symbol;Acc:HGNC:6076]
54. TPD52 ENSGALG00000040167 9891 0.957 - - - - - - - 0.957 - - tumor protein D52 [Source:NCBI gene;Acc:770339]
55. SFT2D1 ENSGALG00000020005 10855 0.956 - - - - - - - 0.956 - - SFT2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21102]
56. ANKRD11 ENSGALG00000006222 12327 0.954 - - - - - - - 0.954 - - ankyrin repeat domain 11, transcript variant X2
57. XRCC5 ENSGALG00000011492 6802 0.942 - - - - - - - 0.942 - - X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]
58. MRPL54 ENSGALG00000027611 39450 0.933 - - - - - - - 0.933 - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
59. PRTG ENSGALG00000037336 34665 0.933 - - - - - - - 0.933 - - protogenin [Source:NCBI gene;Acc:415407]
60. PPA2 ENSGALG00000010582 22301 0.922 - - - - - - - 0.922 - - pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
61. Sep-02_1 Sep-02_1 19203 0.916 - - - - - - - 0.916 - -
62. CHD4 ENSGALG00000013565 25695 0.911 - - - - - - - 0.911 - - chromodomain helicase DNA binding protein 4
63. ENSGALG00000017396 ENSGALG00000017396 9028 0.91 - - - - - - - 0.910 - -
64. FAM98A ENSGALG00000010428 9585 0.903 - - - - - - - 0.903 - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
65. SLC25A39 ENSGALG00000042894 10654 0.902 - - - - - - - 0.902 - - solute carrier family 25 member 39 [Source:HGNC Symbol;Acc:HGNC:24279]
66. CDC42EP4 ENSGALG00000023364 9240 0.9 - - - - - - - 0.900 - - CDC42 effector protein 4 [Source:HGNC Symbol;Acc:HGNC:17147]
67. ZOV3 ZOV3 3267 0.899 - - - - - - - 0.899 - -
68. LRPPRC ENSGALG00000009967 17091 0.883 - - - - - - - 0.883 - - leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
69. ENSGALG00000023609 ENSGALG00000023609 6933 0.868 - - - - - - - 0.868 - -
70. TXNDC9 ENSGALG00000032090 6804 0.856 - - - - - - 0.856 - - - thioredoxin domain containing 9 [Source:HGNC Symbol;Acc:HGNC:24110]
71. ATP6V1G1 ENSGALG00000007190 82534 0.854 - - - - - - - 0.854 - - ATPase H+ transporting V1 subunit G1 [Source:NCBI gene;Acc:417249]
72. CYB5A ENSGALG00000013708 8287 0.839 - - - - - - 0.839 - - - cytochrome b5 type A [Source:NCBI gene;Acc:414798]
73. THAP5 ENSGALG00000009494 6540 0.839 - - - - - - 0.839 - - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
74. GTF2H5 ENSGALG00000013733 12293 0.838 - - - - - - - 0.838 - - general transcription factor IIH subunit 5 [Source:NCBI gene;Acc:769754]
75. DDX59 ENSGALG00000002164 3314 0.827 - - - - - - 0.827 - - - DEAD-box helicase 59 [Source:HGNC Symbol;Acc:HGNC:25360]
76. MAPK6 ENSGALG00000031448 28384 0.82 - - - - - - - 0.820 - - mitogen-activated protein kinase 6 [Source:NCBI gene;Acc:415419]
77. C10ORF58 C10ORF58 5045 0.82 - - - - - - 0.820 - - -
78. ZC3H13 ENSGALG00000016984 21043 0.813 - - - - - - 0.813 - - - zinc finger CCCH-type containing 13 [Source:HGNC Symbol;Acc:HGNC:20368]
79. MRPL53 ENSGALG00000037867 6100 0.812 - - - - - - 0.812 - - - mitochondrial ribosomal protein L53 [Source:NCBI gene;Acc:420196]
80. ATAD5 ENSGALG00000003294 4830 0.81 - - - - - - 0.810 - - - ATPase family, AAA domain containing 5 [Source:NCBI gene;Acc:417408]
81. HOXA9 ENSGALG00000028983 9298 0.809 - - - - - - 0.809 - - - homeobox A9 [Source:NCBI gene;Acc:396096]
82. ASNSD1 ENSGALG00000041666 3757 0.808 - - - - - - 0.808 - - - asparagine synthetase domain containing 1 [Source:NCBI gene;Acc:423983]
83. SGOL1 SGOL1 3919 0.807 - - - - - - 0.807 - - -
84. PSAT1 ENSGALG00000015180 4752 0.807 - - - - - - 0.807 - - - phosphoserine aminotransferase 1 [Source:HGNC Symbol;Acc:HGNC:19129]
85. C12orf5 C12orf5 1463 0.805 - - - - - - 0.805 - - -
86. CUL3 ENSGALG00000005108 9571 0.8 - - - - - - 0.800 - - - cullin 3 [Source:HGNC Symbol;Acc:HGNC:2553]
87. UQCRH ENSGALG00000017380 55734 0.797 - - - - - - 0.797 - - - ubiquinol-cytochrome c reductase hinge protein [Source:NCBI gene;Acc:771939]
88. MARC1 ENSGALG00000009453 5675 0.795 - - - - - - 0.795 - - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
89. RPB6 RPB6 9517 0.795 - - - - - - 0.795 - - -
90. MED28 ENSGALG00000007138 7686 0.794 - - - - - - 0.794 - - - mediator complex subunit 28 [Source:HGNC Symbol;Acc:HGNC:24628]
91. CLTCL1 ENSGALG00000041760 9351 0.794 - - - - - - 0.794 - - - clathrin, heavy chain-like 1, transcript variant X6
92. COMMD4 ENSGALG00000001572 31664 0.791 - - - - - - 0.791 - - - COMM domain containing 4 [Source:NCBI gene;Acc:770048]
93. TFIP11 ENSGALG00000005623 7784 0.791 - - - - - - 0.791 - - - tuftelin interacting protein 11 [Source:NCBI gene;Acc:416909]
94. SMARCAL1 ENSGALG00000011475 1948 0.791 - - - - - - 0.791 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1 [Source:HGNC Symbol;Acc:HGNC:11102]
95. CZH9ORF80 CZH9ORF80 12760 0.79 - - - - - - 0.790 - - -
96. FBXO5 ENSGALG00000013607 6156 0.788 - - - - - - 0.788 - - - F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]
97. BBS2 ENSGALG00000042415 1816 0.785 - - - - - - 0.785 - - - Bardet-Biedl syndrome 2 [Source:NCBI gene;Acc:415694]
98. MSMO1 ENSGALG00000009560 6928 0.785 - - - - - - 0.785 - - - methylsterol monooxygenase 1 [Source:NCBI gene;Acc:422423]
99. PI4KA ENSGALG00000040756 3973 0.782 - - - - - - 0.782 - - - phosphatidylinositol 4-kinase alpha [Source:HGNC Symbol;Acc:HGNC:8983]
100. RRP7A ENSGALG00000011866 7718 0.781 - - - - - - 0.781 - - - ribosomal RNA processing 7 homolog A [Source:NCBI gene;Acc:417975]

There are 197 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA