Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RNF6

Gene Name Gene ID Reads Annotation
RNF6 ENSGALG00000017105 11 ring finger protein 6 [Source:HGNC Symbol;Acc:HGNC:10069]











Genes with expression patterns similar to RNF6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RNF6 ENSGALG00000017105 11 4 - - 1.000 1.000 1.000 1.000 - - - - ring finger protein 6 [Source:HGNC Symbol;Acc:HGNC:10069]
2. XG ENSGALG00000029002 17 1.987 - - - - 0.987 1.000 - - - - Xg blood group
3. RYR2 ENSGALG00000010812 95 1.805 - - - - 0.913 0.892 - - - - ryanodine receptor 2 [Source:HGNC Symbol;Acc:HGNC:10484]
4. SAMSN1 ENSGALG00000040926 88 1.697 - - - - 0.811 0.886 - - - - SAM domain, SH3 domain and nuclear localization signals 1 [Source:NCBI gene;Acc:418470]
5. BTBD3 ENSGALG00000009028 45 1 - - - - - 1.000 - - - - BTB domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15854]
6. IFNAR1 ENSGALG00000030363 22 1 - - - - - 1.000 - - - - interferon alpha and beta receptor subunit 1 [Source:NCBI gene;Acc:395665]
7. NOX5 ENSGALG00000008063 19 1 - - - - - 1.000 - - - - NADPH oxidase 5 [Source:NCBI gene;Acc:415565]
8. ADAMTSL3 ENSGALG00000006104 57 1 - - - - - 1.000 - - - - ADAMTS like 3 [Source:HGNC Symbol;Acc:HGNC:14633]
9. ISPD ENSGALG00000010795 7 1 - - - - - 1.000 - - - - isoprenoid synthase domain containing [Source:HGNC Symbol;Acc:HGNC:37276]
10. CYP11A1 ENSGALG00000034982 1 1 - - - - - 1.000 - - - - cytochrome P450 family 11 subfamily A member 1 [Source:NCBI gene;Acc:414838]
11. SCTR ENSGALG00000012106 49 1 - - - - - 1.000 - - - - secretin receptor [Source:NCBI gene;Acc:770943]
12. ENSGALG00000026109 ENSGALG00000026109 2 1 - - - - - 1.000 - - - -
13. SFMBT1 ENSGALG00000001753 10 1 - - - - - 1.000 - - - - Scm like with four mbt domains 1 [Source:HGNC Symbol;Acc:HGNC:20255]
14. MAPKBP1 2 1 - - - - - 1.000 - - - - mitogen-activated protein kinase binding protein 1, transcript variant X3
15. MFSD8 ENSGALG00000010199 11 1 - - - - - 1.000 - - - - major facilitator superfamily domain containing 8 [Source:HGNC Symbol;Acc:HGNC:28486]
16. ENSGALG00000027597 ENSGALG00000027597 13 1 - - - - - 1.000 - - - -
17. ENSGALG00000025801 ENSGALG00000025801 5 1 - - - - - 1.000 - - - -
18. SLC39A8 ENSGALG00000012298 9 1 - - - - - 1.000 - - - - solute carrier family 39 member 8 [Source:HGNC Symbol;Acc:HGNC:20862]
19. ESRRB ENSGALG00000041775 43 1 - - - - - 1.000 - - - - estrogen related receptor beta [Source:HGNC Symbol;Acc:HGNC:3473]
20. TDRKH ENSGALG00000031812 1 1 - - - - - 1.000 - - - - tudor and KH domain containing [Source:HGNC Symbol;Acc:HGNC:11713]
21. GJA10 ENSGALG00000015606 1 1 - - - - - 1.000 - - - - gap junction protein, alpha 10, 62kDa
22. ENSGALG00000011658 ENSGALG00000011658 1 1 - - - - - 1.000 - - - -
23. gga-mir-1647 ENSGALG00000025382 4 1 - - - - - 1.000 - - - - gga-mir-1647 [Source:miRBase;Acc:MI0007379]
24. CCSER1 ENSGALG00000039674 14 1 - - - - - 1.000 - - - - coiled-coil serine rich protein 1, transcript variant X3
25. DOLK ENSGALG00000026007 6 1 - - - - - 1.000 - - - - dolichol kinase [Source:NCBI gene;Acc:417199]
26. CYTH4 ENSGALG00000012454 12 1 - - - - - 1.000 - - - - cytohesin 4 [Source:NCBI gene;Acc:418043]
27. SNORD65 SNORD65 3 1 - - - - - 1.000 - - - -
28. GPR22 ENSGALG00000008032 5 1 - - - - - 1.000 - - - - G protein-coupled receptor 22, transcript variant X1
29. SLC2A1 ENSGALG00000004889 10 1 - - - - - 1.000 - - - - solute carrier family 2 member 1 [Source:NCBI gene;Acc:396130]
30. FLNB ENSGALG00000005678 68 0.988 - - - - - 0.988 - - - - filamin B [Source:NCBI gene;Acc:378913]
31. MAT2A ENSGALG00000015366 17 0.987 - - - - 0.987 - - - - - methionine adenosyltransferase 2A, transcript variant X1
32. CD101 12 0.987 - - - - 0.987 - - - - - CD101 molecule, transcript variant X4
33. ENSGALG00000006897 ENSGALG00000006897 13 0.987 - - - - 0.987 - - - - -
34. EGLN3 ENSGALG00000010001 32 0.987 - - - - 0.987 - - - - - egl-9 family hypoxia inducible factor 3 [Source:HGNC Symbol;Acc:HGNC:14661]
35. CLCA1 ENSGALG00000006322 5 0.987 - - - - 0.987 - - - - - chloride channel accessory 1 [Source:HGNC Symbol;Acc:HGNC:2015]
36. UGP2 ENSGALG00000008855 20 0.987 - - - - 0.987 - - - - - UDP-glucose pyrophosphorylase 2 [Source:NCBI gene;Acc:373900]
37. GNB4 ENSGALG00000008983 26 0.987 - - - - 0.987 - - - - - G protein subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:20731]
38. ENSGALG00000016601 ENSGALG00000016601 16 0.987 - - - - 0.987 - - - - -
39. PCDH7 ENSGALG00000033883 6 0.987 - - - - 0.987 - - - - - protocadherin 7 [Source:HGNC Symbol;Acc:HGNC:8659]
40. ENO4 ENSGALG00000009254 19 0.987 - - - - 0.987 - - - - - enolase 4 [Source:HGNC Symbol;Acc:HGNC:31670]
41. YTHDF3 ENSGALG00000039774 170 0.985 - - - - - 0.985 - - - - YTH N6-methyladenosine RNA binding protein 3 [Source:NCBI gene;Acc:421145]
42. ENSGALG00000002020 ENSGALG00000002020 183 0.981 - - - - - 0.981 - - - -
43. ENSGALG00000027412 ENSGALG00000027412 202 0.976 - - - - - 0.976 - - - -
44. KLRD1 ENSGALG00000014722 27 0.962 - - - - - 0.962 - - - - killer cell lectin like receptor D1 [Source:NCBI gene;Acc:769174]
45. C14orf166B C14orf166B 4 0.962 - - - - - 0.962 - - - -
46. LRRC34 ENSGALG00000009402 3 0.96 - - - - - 0.960 - - - - leucine rich repeat containing 34 [Source:HGNC Symbol;Acc:HGNC:28408]
47. NHS ENSGALG00000016543 11 0.96 - - - - - 0.960 - - - - NHS actin remodeling regulator [Source:HGNC Symbol;Acc:HGNC:7820]
48. KIAA1549L ENSGALG00000012020 33 0.955 - - - - - 0.955 - - - - KIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]
49. ATP8A2 ENSGALG00000017106 31 0.951 - - - - 0.951 - - - - - ATPase phospholipid transporting 8A2 [Source:HGNC Symbol;Acc:HGNC:13533]
50. CA3 CA3 200 0.951 - - - - - 0.951 - - - -
51. BKJ ENSGALG00000030478, ENSGALG00000031115, ENSGALG00000032838, ENSGALG00000035763, ENSGALG00000038477, ENSGALG00000039526, ENSGALG00000041545 14 0.944 - - - - - 0.944 - - - - beta-keratin related protein, transcript variant X1
52. F13A1 ENSGALG00000012802 16 0.944 - - - - - 0.944 - - - - coagulation factor XIII A chain [Source:NCBI gene;Acc:395420]
53. ENSGALG00000004223 ENSGALG00000004223 7 0.944 - - - - - 0.944 - - - -
54. CD1A1 CD1A1 12 0.936 - - - - - 0.936 - - - -
55. JAK1 ENSGALG00000011031 434 0.93 - - - - - 0.930 - - - - Janus kinase 1 [Source:NCBI gene;Acc:395681]
56. LOC100857197 ENSGALG00000009272 28 0.924 - - - - - 0.924 - - - - uncharacterized LOC100857197, transcript variant X4
57. ZCCHC9 ENSGALG00000015603 3118 0.91 - - - - - 0.910 - - - - zinc finger CCHC-type containing 9 [Source:HGNC Symbol;Acc:HGNC:25424]
58. MED13L ENSGALG00000008238 27 0.909 - - - - 0.909 - - - - - mediator complex subunit 13 like [Source:HGNC Symbol;Acc:HGNC:22962]
59. TAT ENSGALG00000000893 11 0.909 - - - - 0.909 - - - - - tyrosine aminotransferase [Source:HGNC Symbol;Acc:HGNC:11573]
60. ENPP3 ENSGALG00000037587 25 0.904 - - - - - 0.904 - - - - ectonucleotide pyrophosphatase/phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:3358]
61. CDCP2 ENSGALG00000010752 4 0.902 - - - - 0.902 - - - - - CUB domain containing protein 2 [Source:HGNC Symbol;Acc:HGNC:27297]
62. TSPO ENSGALG00000014166 60 0.902 - - - - - 0.902 - - - - translocator protein [Source:NCBI gene;Acc:418226]
63. CXorf21 ENSGALG00000016286 4 0.901 - - - - - 0.901 - - - - chromosome X open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:25667]
64. MAGI3 ENSGALG00000001816 12 0.891 - - - - 0.891 - - - - - membrane associated guanylate kinase, WW and PDZ domain containing 3 [Source:NCBI gene;Acc:419877]
65. FGL2 ENSGALG00000008306 15 0.889 - - - - - 0.889 - - - - fibrinogen like 2 [Source:NCBI gene;Acc:768821]
66. CCDC33 7 0.888 - - - - 0.888 - - - - - coiled-coil domain containing 33, transcript variant X2
67. TAF4B ENSGALG00000015122 28 0.888 - - - - 0.888 - - - - - TATA-box binding protein associated factor 4b [Source:HGNC Symbol;Acc:HGNC:11538]
68. RAB44 ENSGALG00000000544 6 0.888 - - - - - 0.888 - - - - RAB44, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21068]
69. PCDH19 ENSGALG00000006822 13 0.887 - - - - - 0.887 - - - - protocadherin 19 [Source:NCBI gene;Acc:422263]
70. SH3RF1 ENSGALG00000009692 46 0.884 - - - - - 0.884 - - - - SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:HGNC:17650]
71. HTR7_1 ENSGALG00000040549 86 0.883 - - - - - 0.883 - - - - 5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled [Source:NCBI gene;Acc:423794]
72. ISG12(2) ISG12(2) 146 0.871 - - - - - 0.871 - - - -
73. CDAN1 ENSGALG00000009156 110 0.871 - - - - 0.871 - - - - - codanin 1, transcript variant X2
74. TLR1LB TLR1LB 65 0.863 - - - - - 0.863 - - - -
75. ENSGALG00000025985 ENSGALG00000025985 1 0.862 - - - 0.862 - - - - - -
76. GPR156 ENSGALG00000014973 4 0.862 - - - 0.862 - - - - - - G protein-coupled receptor 156, transcript variant X4
77. ENSGALG00000005482 ENSGALG00000005482 1 0.862 - - - 0.862 - - - - - -
78. CMYA5 16 0.862 - - - 0.862 - - - - - - cardiomyopathy associated 5
79. CALB1 ENSGALG00000032282 16 0.862 - - - 0.862 - - - - - - calbindin 1 [Source:NCBI gene;Acc:396519]
80. PP2D1 ENSGALG00000044362 2 0.862 - - - 0.862 - - - - - - protein phosphatase 2C like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28406]
81. gga-let-7i ENSGALG00000018237 2 0.862 - - - 0.862 - - - - - - gga-let-7i [Source:miRBase;Acc:MI0001168]
82. PRG4 3 0.862 - - - 0.862 - - - - - - proteoglycan 4
83. HELB ENSGALG00000009885 8 0.862 - - - 0.862 - - - - - - DNA helicase B [Source:HGNC Symbol;Acc:HGNC:17196]
84. HOXA11 ENSGALG00000040021 3 0.862 - - - 0.862 - - - - - - homeobox A11 [Source:NCBI gene;Acc:395327]
85. FLT4 ENSGALG00000005802 5 0.862 - - - 0.862 - - - - - - fms related tyrosine kinase 4 [Source:NCBI gene;Acc:395742]
86. DES ENSGALG00000011306 16 0.862 - - - 0.862 - - - - - - desmin [Source:HGNC Symbol;Acc:HGNC:2770]
87. NHSL1 ENSGALG00000026981 11 0.862 - - - 0.862 - - - - - - NHS like 1 [Source:HGNC Symbol;Acc:HGNC:21021]
88. ENSGALG00000016269 ENSGALG00000016269 3 0.862 - - - 0.862 - - - - - -
89. RNF180 ENSGALG00000014743 3 0.862 - - - 0.862 - - - - - - ring finger protein 180 [Source:HGNC Symbol;Acc:HGNC:27752]
90. SLC6A6 ENSGALG00000006425 31 0.862 - - - 0.862 - - - - - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
91. SOX2 ENSGALG00000043460 6 0.862 - - - 0.862 - - - - - - SRY-box 2 [Source:NCBI gene;Acc:396105]
92. KCNRG ENSGALG00000017012 4 0.862 - - - 0.862 - - - - - - potassium channel regulator [Source:HGNC Symbol;Acc:HGNC:18893]
93. ABHD3 ENSGALG00000014938 9 0.862 - - - 0.862 - - - - - - abhydrolase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:18718]
94. TMEM200A ENSGALG00000002282 77 0.86 - - - - - 0.860 - - - - transmembrane protein 200A [Source:HGNC Symbol;Acc:HGNC:21075]
95. CLDN20 ENSGALG00000027634 25 0.859 - - 0.859 - - - - - - - claudin 20 [Source:HGNC Symbol;Acc:HGNC:2042]
96. TMX4 ENSGALG00000028587 3513 0.859 - - - - - 0.859 - - - - thioredoxin related transmembrane protein 4 [Source:NCBI gene;Acc:416729]
97. SYCP1 ENSGALG00000002511 13 0.855 - - - - 0.855 - - - - - synaptonemal complex protein 1 [Source:HGNC Symbol;Acc:HGNC:11487]
98. EXD3 30 0.853 - - - - - 0.853 - - - - exonuclease 3'-5' domain containing 3, transcript variant X23
99. RBM15 ENSGALG00000000401 22 0.852 - - - - 0.852 - - - - - RNA binding motif protein 15 [Source:HGNC Symbol;Acc:HGNC:14959]
100. ARFGEF2 ENSGALG00000004663 98 0.831 - - - - - 0.831 - - - - ADP ribosylation factor guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:15853]

There are 80 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA