Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RNF5

Gene Name Gene ID Reads Annotation
RNF5 ENSDARG00000075606 1730 ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]










Genes with expression patterns similar to RNF5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RNF5 ENSDARG00000075606 1730 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
2. dlg5a ENSDARG00000074059 1834 2.844 0.946 - - - - - - 0.916 0.982 discs, large homolog 5a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-3149]
3. sppl2 ENSDARG00000030448 1040 2.621 - - - - - 0.754 - 0.900 0.967 signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
4. CASKIN2_1 CASKIN2_1 2299 2.55 0.868 0.700 - - - - - 0.982 -
5. phactr4a ENSDARG00000015552 1315 2.532 - 0.725 - - - - 0.820 - 0.987 phosphatase and actin regulator 4a [Source:ZFIN;Acc:ZDB-GENE-051030-69]
6. fam89a ENSDARG00000079979 4375 2.495 0.905 - - - - - 0.799 - 0.791 family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
7. plk2b ENSDARG00000019130, ENSDARG00000111402 328 2.489 0.969 0.738 - - - 0.782 - - - polo-like kinase 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070720-17]
8. xylt1 ENSDARG00000061248 2357 2.471 - - - - - 0.758 - 0.924 0.789 xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
9. mvp ENSDARG00000021242 6875 2.422 0.715 - - - - - - 0.789 0.918 major vault protein [Source:ZFIN;Acc:ZDB-GENE-030826-33]
10. gmfb ENSDARG00000028327 6522 2.398 0.937 0.709 - 0.752 - - - - - glia maturation factor, beta [Source:ZFIN;Acc:ZDB-GENE-040426-2114]
11. arhgap5 ENSDARG00000061294 2228 2.384 - 0.731 - - - - 0.710 - 0.943 Rho GTPase activating protein 5 [Source:ZFIN;Acc:ZDB-GENE-081014-1]
12. ptbp1a ENSDARG00000019362 6290 2.187 - 0.712 - 0.764 - - 0.711 - - polypyrimidine tract binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-492]
13. prc1a ENSDARG00000100918 1746 1.962 - - - - - - - 0.976 0.986 protein regulator of cytokinesis 1a [Source:ZFIN;Acc:ZDB-GENE-020801-3]
14. ptpn21 ENSDARG00000062248 2010 1.948 0.979 - - - - - - 0.969 - protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
15. tmem55a 1331 1.94 0.970 - - - - - - 0.970 - transmembrane protein 55A
16. si:dkey-238o13.4 ENSDARG00000078847 884 1.917 0.937 - - - - - - 0.980 - si:dkey-238o13.4 [Source:ZFIN;Acc:ZDB-GENE-070705-403]
17. cib1 ENSDARG00000103118 291 1.894 0.983 - - - - 0.911 - - - calcium and integrin binding 1 (calmyrin) [Source:ZFIN;Acc:ZDB-GENE-050417-170]
18. atp2a3 ENSDARG00000060978 1408 1.885 0.919 - - - - - - - 0.966 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:ZFIN;Acc:ZDB-GENE-060531-103]
19. sin3ab ENSDARG00000059812 2140 1.874 - - - - - 0.884 - - 0.990 SIN3 transcription regulator family member Ab [Source:ZFIN;Acc:ZDB-GENE-030131-2066]
20. sh3yl1 ENSDARG00000074393 815 1.87 0.900 - - - - - - - 0.970 SH3 and SYLF domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040128-16]
21. dhrs3b ENSDARG00000044803 2931 1.844 - - - - - 0.873 - - 0.971 dehydrogenase/reductase (SDR family) member 3b [Source:ZFIN;Acc:ZDB-GENE-041010-172]
22. pycr1 pycr1 1258 1.838 0.983 - - - - 0.855 - - -
23. actr5 ENSDARG00000098235 237 1.837 0.978 - - - - 0.859 - - - ARP5 actin related protein 5 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2877]
24. iah1 ENSDARG00000015765 326 1.83 0.965 - - - - 0.865 - - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-186]
25. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.83 0.882 - - - - - - - 0.948 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
26. asnsd1 830 1.825 - - - - - 0.843 - 0.982 - asparagine synthetase domain containing 1, transcript variant X1
27. SCML2 ENSDARG00000012949 1310 1.825 0.949 - - - - - - 0.876 - Scm polycomb group protein like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-546]
28. alad ENSDARG00000100372 1711 1.82 0.891 - - - - 0.929 - - - aminolevulinate dehydratase [Source:ZFIN;Acc:ZDB-GENE-050417-123]
29. spred1 ENSDARG00000041449, ENSDARG00000117025 1124 1.819 - - - - - 0.909 - 0.910 - sprouty-related, EVH1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2338]
30. plat ENSDARG00000062707 491 1.817 - - - - - 0.839 - 0.978 - plasminogen activator, tissue [Source:ZFIN;Acc:ZDB-GENE-081104-181]
31. WDFY3 ENSDARG00000078890 2092 1.814 - - - - - 0.901 - - 0.913 WD repeat and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-153]
32. srp19 ENSDARG00000035699 2624 1.812 0.933 - - - - - - 0.879 - signal recognition particle 19 [Source:ZFIN;Acc:ZDB-GENE-040426-2657]
33. thap4 ENSDARG00000077323 434 1.808 0.972 - - - - 0.836 - - - THAP domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070912-5]
34. prpf31 ENSDARG00000095904 526 1.801 - - - - - 0.818 - 0.983 - PRP31 pre-mRNA processing factor 31 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1561]
35. gabpb2a ENSDARG00000007943 1570 1.797 - - - - - 0.904 - 0.893 - GA binding protein transcription factor subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5733]
36. map2k1 ENSDARG00000007825 373 1.794 0.951 - - - - - 0.843 - - mitogen-activated protein kinase kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2759]
37. cxcr4a ENSDARG00000057633 1829 1.792 - - - - - - - 0.924 0.868 chemokine (C-X-C motif) receptor 4a [Source:ZFIN;Acc:ZDB-GENE-020102-1]
38. ek1 ENSDARG00000020080 742 1.791 - - - - - 0.808 - 0.983 - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
39. phf10 ENSDARG00000070084 1210 1.791 - - - - - 0.814 - 0.977 - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
40. MALSU1 MALSU1 1251 1.791 - - - - - 0.822 - - 0.969
41. ankrd10b ENSDARG00000004771 654 1.79 0.958 - - - - 0.832 - - - ankyrin repeat domain 10b [Source:ZFIN;Acc:ZDB-GENE-061013-49]
42. chmp3 ENSDARG00000038064 577 1.79 0.934 - - - - 0.856 - - - charged multivesicular body protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2600]
43. rnf11a ENSDARG00000010442 592 1.789 0.963 - - - - 0.826 - - - ring finger protein 11a [Source:ZFIN;Acc:ZDB-GENE-040426-1277]
44. atcaya ENSDARG00000071678 344 1.785 - - - - - 0.802 - 0.983 - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
45. nme3 ENSDARG00000100990 3889 1.784 0.913 - - - - - - - 0.871 NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
46. schip1 ENSDARG00000035175 3838 1.776 - - - - - - - 0.913 0.863 schwannomin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-466]
47. nexmifb ENSDARG00000029296 416 1.773 - - - - - 0.794 - 0.979 - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
48. si:dkeyp-120h9.1 ENSDARG00000020278 3120 1.772 0.902 - - - - 0.870 - - - si:dkeyp-120h9.1 [Source:ZFIN;Acc:ZDB-GENE-070705-534]
49. mpv17 ENSDARG00000032431 1225 1.769 0.789 - - - - - - - 0.980 MpV17 mitochondrial inner membrane protein [Source:ZFIN;Acc:ZDB-GENE-040426-1168]
50. fam65b 557 1.768 - - - - - 0.798 - - 0.970 family with sequence similarity 65, member B, transcript variant X4
51. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 1.764 - - - - - 0.851 - 0.913 - D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
52. hspbp1 ENSDARG00000102937 260 1.761 0.924 - - - - 0.837 - - - HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 [Source:ZFIN;Acc:ZDB-GENE-030219-55]
53. si:dkey-180p18.9 381 1.761 - - - - - 0.811 - 0.950 - si:dkey-180p18.9
54. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.76 0.954 - - - - 0.806 - - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
55. MAP3K6 MAP3K6 181 1.755 0.934 - - - - 0.821 - - -
56. unc119b ENSDARG00000044362 1528 1.752 - - - - - 0.812 - 0.940 - unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
57. smcr8a ENSDARG00000052818 559 1.752 - - - - - 0.771 - 0.981 - Smith-Magenis syndrome chromosome region, candidate 8a [Source:ZFIN;Acc:ZDB-GENE-071212-4]
58. tmed7 ENSDARG00000046022 2435 1.75 0.872 - - - - - - 0.878 - transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
59. sumo3b ENSDARG00000035993 3414 1.746 0.946 - - - - - - 0.800 - small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
60. sp1 ENSDARG00000088347 1697 1.741 - - - - - 0.775 - 0.966 - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
61. CABZ01072954.1 CABZ01072954.1 2330 1.741 - - - - - 0.785 - 0.956 -
62. tceb1a 969 1.741 - 0.758 - - - - - 0.983 - transcription elongation factor B (SIII), polypeptide 1a, transcript variant X4
63. itga11a ENSDARG00000036086, ENSDARG00000111495 254 1.74 - - - - - 0.755 - 0.985 - integrin, alpha 11a [Source:ZFIN;Acc:ZDB-GENE-050324-1]
64. bcl9 ENSDARG00000036687 1124 1.739 - - - - - 0.755 - 0.984 - B cell CLL/lymphoma 9 [Source:ZFIN;Acc:ZDB-GENE-090313-135]
65. glipr2l ENSDARG00000016837 440 1.736 0.899 - - - - 0.837 - - - GLI pathogenesis-related 2, like [Source:ZFIN;Acc:ZDB-GENE-041010-53]
66. id3 ENSDARG00000054823 3484 1.736 - - - - - - - 0.826 0.910 inhibitor of DNA binding 3 [Source:ZFIN;Acc:ZDB-GENE-020515-1]
67. her15.2 her15.2 1701 1.736 0.894 - - - - 0.842 - - -
68. mir205 2147 1.732 0.752 - - - - - - - 0.980 microRNA 205
69. asap2b ENSDARG00000019564 1660 1.731 - 0.776 - - - - - - 0.955 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5060]
70. golga7 ENSDARG00000057676 4691 1.73 0.890 - - - - - - 0.840 - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
71. coil ENSDARG00000040070 863 1.728 - - - - - 0.740 - - 0.988 coilin p80 [Source:ZFIN;Acc:ZDB-GENE-000330-8]
72. LDLR LDLR 838 1.722 0.738 - - - - - - - 0.984
73. sec31b ENSDARG00000002916 1792 1.722 - - - - - - - 0.771 0.951 SEC31 homolog B, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-060418-2]
74. PLEKHM3 ENSDARG00000030633 496 1.721 0.954 - - - - 0.767 - - - pleckstrin homology domain containing, family M, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-382]
75. ccdc90b ENSDARG00000044626, ENSDARG00000110887 501 1.718 - - - - - - 0.734 - 0.984 coiled-coil domain containing 90B [Source:ZFIN;Acc:ZDB-GENE-040724-162]
76. anxa4 ENSDARG00000036456 3332 1.716 - 0.771 - - - - - - 0.945 annexin A4 [Source:ZFIN;Acc:ZDB-GENE-030707-1]
77. ube2kb ENSDARG00000013505, ENSDARG00000114039 3968 1.713 - - - - - - 0.751 - 0.962 ubiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-980605-9]
78. rab23 ENSDARG00000004151 1077 1.712 - - - - - 0.739 - 0.973 - RAB23, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050522-328]
79. mllt3 ENSDARG00000006754 985 1.71 - - - - - - 0.730 0.980 - MLLT3, super elongation complex subunit [Source:ZFIN;Acc:ZDB-GENE-050417-356]
80. lztr1 ENSDARG00000015905, ENSDARG00000114621 632 1.705 0.967 0.738 - - - - - - - leucine-zipper-like transcription regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9564]
81. tubgcp2 ENSDARG00000013079 1520 1.702 - - - - - 0.735 - 0.967 - tubulin, gamma complex associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-150]
82. g6pd ENSDARG00000071065, ENSDARG00000111009 1618 1.701 - 0.748 - - - - - - 0.953 glucose-6-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070508-4]
83. pmpca ENSDARG00000102607 1024 1.697 - 0.717 - - - - - 0.980 - peptidase (mitochondrial processing) alpha [Source:ZFIN;Acc:ZDB-GENE-030131-5809]
84. CPAMD8 ENSDARG00000056530 3481 1.696 0.756 - - - - - - - 0.940 C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
85. vta1 ENSDARG00000013732 6072 1.692 0.872 - - - - - - 0.820 - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
86. fam155a ENSDARG00000075858 91 1.691 0.981 - - - - 0.710 - - - family with sequence similarity 155, member A [Source:ZFIN;Acc:ZDB-GENE-090313-34]
87. rpz5 ENSDARG00000075718 1703 1.686 - 0.748 - - - - - - 0.938 rapunzel 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4678]
88. CDC42SE2 ENSDARG00000094577, ENSDARG00000113403 606 1.684 - - - - - 0.705 - 0.979 - CDC42 small effector 2 [Source:ZFIN;Acc:ZDB-GENE-080204-45]
89. klf13 ENSDARG00000061368 1151 1.683 - 0.723 - - - - - 0.960 - Kruppel-like factor 13 [Source:ZFIN;Acc:ZDB-GENE-060929-1274]
90. zgc:110626 ENSDARG00000053159 1124 1.682 0.956 - - - - 0.726 - - - zgc:110626 [Source:ZFIN;Acc:ZDB-GENE-050417-447]
91. aldh1l1 ENSDARG00000077004, ENSDARG00000114342 2113 1.681 - 0.781 - - - - - 0.900 - aldehyde dehydrogenase 1 family, member L1 [Source:ZFIN;Acc:ZDB-GENE-100519-4]
92. si:ch211-120j21.1 si:ch211-120j21.1 638 1.679 0.899 0.780 - - - - - - -
93. tax1bp3 ENSDARG00000059177 4324 1.678 0.947 - - - - - 0.731 - - Tax1 (human T-cell leukemia virus type I) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2830]
94. il17rd ENSDARG00000098359 1153 1.677 - - - - - 0.706 - - 0.971 interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
95. aup1 ENSDARG00000092609 2431 1.676 0.944 - - - - - 0.732 - - ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
96. psenen ENSDARG00000068698 2777 1.673 - - - - - 0.702 - 0.971 - presenilin enhancer, gamma-secretase subunit [Source:ZFIN;Acc:ZDB-GENE-040218-1]
97. rerea ENSDARG00000077353 4162 1.672 0.902 - - - - 0.770 - - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
98. irx5a ENSDARG00000034043 1694 1.672 - - - - - 0.711 - 0.961 - iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
99. tnfrsf1a ENSDARG00000018569 842 1.669 0.911 - - - - - 0.758 - - tumor necrosis factor receptor superfamily, member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2252]
100. gle1 ENSDARG00000043559 1362 1.665 - - - - - 0.829 - 0.836 - GLE1 RNA export mediator homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040831-4]

There are 2378 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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