Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RNF39

Gene Name Gene ID Reads Annotation
RNF39 RNF39 52










Genes with expression patterns similar to RNF39

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RNF39 RNF39 52 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000
2. si:dkey-253d23.8 ENSDARG00000094427 26 1.98 - 1.000 - - 0.980 - - - - si:dkey-253d23.8 [Source:ZFIN;Acc:ZDB-GENE-050208-568]
3. UBXN11 ENSDARG00000053828 22 1.897 - - - 0.992 - - - - 0.905 UBX domain protein 11 [Source:ZFIN;Acc:ZDB-GENE-100922-125]
4. lyst ENSDARG00000008575, ENSDARG00000113634 55 1.862 - 0.862 - - - 1.000 - - - lysosomal trafficking regulator [Source:ZFIN;Acc:ZDB-GENE-070702-1]
5. si:dkey-29b11.3 ENSDARG00000087388 29 1.822 1.000 - - - - 0.822 - - - si:dkey-29b11.3 [Source:ZFIN;Acc:ZDB-GENE-100922-178]
6. si:ch211-136m16.8 ENSDARG00000090767 91 1.82 0.958 0.862 - - - - - - - si:ch211-136m16.8 [Source:ZFIN;Acc:ZDB-GENE-121214-301]
7. TOR4A_1 TOR4A_1 20 1.808 0.946 0.862 - - - - - - -
8. tbx21 ENSDARG00000004473, ENSDARG00000115643 30 1.763 0.869 - - - - 0.894 - - - T-box 21 [Source:ZFIN;Acc:ZDB-GENE-080104-3]
9. slc10a3 ENSDARG00000103220 30 1.756 - 0.862 - - - 0.894 - - - solute carrier family 10, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2347]
10. drd2b ENSDARG00000011091, ENSDARG00000111351 130 1.739 - 0.820 - 0.919 - - - - - dopamine receptor D2b [Source:ZFIN;Acc:ZDB-GENE-030910-2]
11. si:dkey-11f4.16 ENSDARG00000099799 121 1.708 0.839 0.869 - - - - - - - si:dkey-11f4.16 [Source:ZFIN;Acc:ZDB-GENE-070912-357]
12. BX511006.2 BX511006.2 29 1.699 - - - - 0.989 0.710 - - -
13. si:dkey-199f5.4 ENSDARG00000110483 4 1.697 - - - - 0.987 0.710 - - - si:dkey-199f5.4 [Source:ZFIN;Acc:ZDB-GENE-100922-53]
14. si:dkey-117m1.3 si:dkey-117m1.3 154 1.693 0.800 - - 0.893 - - - - -
15. VDR VDR 489 1.692 0.724 - - 0.968 - - - - -
16. cx30.9 ENSDARG00000070362 17 1.678 - - - - 0.968 0.710 - - - connexin 30.9 [Source:ZFIN;Acc:ZDB-GENE-050616-2]
17. itgbl1 ENSDARG00000040985 705 1.665 - 0.862 - - 0.803 - - - - integrin, beta-like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-410]
18. chst14 ENSDARG00000043011 345 1.663 - - - 0.916 - 0.747 - - - carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14 [Source:ZFIN;Acc:ZDB-GENE-040401-3]
19. arhgef28 ENSDARG00000060415 142 1.659 - 0.718 - 0.941 - - - - - Rho guanine nucleotide exchange factor (GEF) 28 [Source:ZFIN;Acc:ZDB-GENE-060531-28]
20. abl2 ENSDARG00000013841 145 1.654 - - - 0.944 - 0.710 - - - c-abl oncogene 2, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-020809-2]
21. rims1a ENSDARG00000074680 143 1.651 0.911 - - - 0.740 - - - - regulating synaptic membrane exocytosis 1a [Source:ZFIN;Acc:ZDB-GENE-090312-135]
22. wdr45l wdr45l 123 1.645 0.826 - - - 0.819 - - - -
23. pde10a ENSDARG00000003449 60 1.628 0.909 - - - - - - - 0.719 phosphodiesterase 10A [Source:ZFIN;Acc:ZDB-GENE-040426-1115]
24. si:dkey-229d11.5 ENSDARG00000094392 33 1.617 0.907 - - - - 0.710 - - - si:dkey-229d11.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5342]
25. mtmr7a ENSDARG00000037101, ENSDARG00000111336 161 1.616 0.808 0.808 - - - - - - - myotubularin related protein 7a [Source:ZFIN;Acc:ZDB-GENE-060421-7754]
26. si:ch211-110p13.9 ENSDARG00000093821 82 1.609 - 0.862 - - - - - - 0.747 si:ch211-110p13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-9]
27. si:ch211-113a14.14_2 si:ch211-113a14.14_2 156 1.59 0.869 0.721 - - - - - - -
28. PEG3_3 PEG3_3 165 1.571 - - - 0.861 - 0.710 - - -
29. si:dkey-238o14.8 si:dkey-238o14.8 32 1.565 - 0.725 - - 0.840 - - - -
30. spef2 ENSDARG00000098330 59 1.532 - 0.701 - - - - - - 0.831 sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
31. ccdc80l2 ENSDARG00000044695 150 1.53 - - - 0.801 0.729 - - - - coiled-coil domain containing 80 like 2 [Source:ZFIN;Acc:ZDB-GENE-091118-63]
32. SLC22A23_1 SLC22A23_1 308 1.529 0.805 - - 0.724 - - - - -
33. si:dkey-3p4.8 ENSDARG00000114124 82 1.52 - 0.744 - - - 0.776 - - - si:dkey-3p4.8 [Source:ZFIN;Acc:ZDB-GENE-120215-16]
34. nitr3c ENSDARG00000057620, ENSDARG00000077998, ENSDARG00000111724 96 1.514 - - - 0.791 - - - - 0.723 novel immune-type receptor 3c [Source:ZFIN;Acc:ZDB-GENE-041001-13]
35. lifrb ENSDARG00000039863 102 1.489 - 0.718 - - 0.771 - - - - leukemia inhibitory factor receptor alpha b [Source:ZFIN;Acc:ZDB-GENE-080107-2]
36. hacl1 ENSDARG00000020529 228 1.474 0.760 - - - - - - - 0.714 2-hydroxyacyl-CoA lyase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2058]
37. nphp1 ENSDARG00000009046, ENSDARG00000113790 104 1.472 - - - 0.723 - - - - 0.749 nephronophthisis 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1234]
38. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 1.447 - - - 0.737 - 0.710 - - - cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
39. zgc:174862 ENSDARG00000077571 201 1.44 - 0.730 - - - 0.710 - - - zgc:174862 [Source:ZFIN;Acc:ZDB-GENE-080303-29]
40. pla2g15 ENSDARG00000103271 4 1.435 - 0.725 - - - 0.710 - - - phospholipase A2, group XV [Source:ZFIN;Acc:ZDB-GENE-030131-6948]
41. si:ch211-207e19.15 ENSDARG00000113022 5 1.42 - - 0.710 - - 0.710 - - - si:ch211-207e19.15 [Source:ZFIN;Acc:ZDB-GENE-110914-27]
42. FAM175B FAM175B 23 1 - 1.000 - - - - - - -
43. ripply2 ENSDARG00000070535 18 1 - 1.000 - - - - - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
44. crym ENSDARG00000062817 171 1 1.000 - - - - - - - - crystallin, mu [Source:ZFIN;Acc:ZDB-GENE-070112-1782]
45. lrp2bp ENSDARG00000040478 21 1 - - - - - 1.000 - - - LRP2 binding protein [Source:ZFIN;Acc:ZDB-GENE-070615-41]
46. sall1b ENSDARG00000075891 32 1 - 1.000 - - - - - - - spalt-like transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-020228-3]
47. si:ch211-255a21.4 si:ch211-255a21.4 26 1 1.000 - - - - - - - -
48. SLC9A3R2_1 SLC9A3R2_1 28 1 - - - - - 1.000 - - -
49. FCHSD2 FCHSD2 35 1 1.000 - - - - - - - -
50. zgc:173570 ENSDARG00000037645, ENSDARG00000114242 46 1 - 1.000 - - - - - - - zgc:173570 [Source:ZFIN;Acc:ZDB-GENE-080218-15]
51. si:ch211-260c23.1 13 1 - 1.000 - - - - - - - si:ch211-260c23.1, transcript variant X7
52. SAC3D1 SAC3D1 72 1 - 1.000 - - - - - - -
53. ncs1b ENSDARG00000054186 252 1 - 1.000 - - - - - - - neuronal calcium sensor 1b [Source:ZFIN;Acc:ZDB-GENE-050930-1]
54. CU929036.1 CU929036.1 7 1 1.000 - - - - - - - -
55. si:ch211-229g14.3 ENSDARG00000095101 5 1 1.000 - - - - - - - - si:ch211-229g14.3 [Source:ZFIN;Acc:ZDB-GENE-081104-187]
56. nr6a1a ENSDARG00000096224, ENSDARG00000101508 24 1 - 1.000 - - - - - - - nuclear receptor subfamily 6, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-991207-19]
57. PPP2R2A PPP2R2A 50 1 1.000 - - - - - - - -
58. si:ch211-113a14.14_3 si:ch211-113a14.14_3 21 1 1.000 - - - - - - - -
59. bik ENSDARG00000045549 18 1 1.000 - - - - - - - - BCL2 interacting killer [Source:ZFIN;Acc:ZDB-GENE-041210-181]
60. VASP VASP 22 1 1.000 - - - - - - - -
61. INF2 37 1 1.000 - - - - - - - - inverted formin, FH2 and WH2 domain containing
62. gngt2a ENSDARG00000010680, ENSDARG00000110351 337 1 1.000 - - - - - - - - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7595]
63. U3_9 U3_9 4 1 1.000 - - - - - - - -
64. ampd2 ampd2 6 1 1.000 - - - - - - - -
65. si:dkey-225k4.1 ENSDARG00000092045 47 1 1.000 - - - - - - - - si:dkey-225k4.1 [Source:ZFIN;Acc:ZDB-GENE-091204-219]
66. si:dkey-228i19.34 si:dkey-228i19.34 43 1 1.000 - - - - - - - -
67. si:ch211-133l5.4 ENSDARG00000092533 5 1 1.000 - - - - - - - - si:ch211-133l5.4 [Source:ZFIN;Acc:ZDB-GENE-081104-114]
68. ARX ARX 71 1 1.000 - - - - - - - -
69. mcm6l ENSDARG00000033231, ENSDARG00000111624 23 1 - 1.000 - - - - - - - MCM6 minichromosome maintenance deficient 6, like [Source:ZFIN;Acc:ZDB-GENE-050913-141]
70. oprl1 ENSDARG00000071209 58 1 1.000 - - - - - - - - opiate receptor-like 1 [Source:ZFIN;Acc:ZDB-GENE-040312-4]
71. polg2 ENSDARG00000074933 117 1 - 1.000 - - - - - - - polymerase (DNA directed), gamma 2, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060810-116]
72. PEG3_7 PEG3_7 15 1 1.000 - - - - - - - -
73. CU459094.2 ENSDARG00000113503 5 1 - - - - - 1.000 - - - uncharacterized LOC100331538 [Source:NCBI gene;Acc:100331538]
74. slco1c1 ENSDARG00000016749 30 1 - 1.000 - - - - - - - solute carrier organic anion transporter family, member 1C1 [Source:ZFIN;Acc:ZDB-GENE-041210-50]
75. BX323064.1 ENSDARG00000099914 11 1 - 1.000 - - - - - - -
76. wu:fb63a08 38 1 1.000 - - - - - - - - wu:fb63a08
77. si:dkey-7c18.24 ENSDARG00000041433, ENSDARG00000113434, ENSDARG00000116523 89 1 - - - - - 1.000 - - - si:dkey-7c18.24 [Source:ZFIN;Acc:ZDB-GENE-041014-63]
78. SLC39A11 ENSDARG00000098194 23 1 1.000 - - - - - - - - solute carrier family 39 member 11 [Source:HGNC Symbol;Acc:HGNC:14463]
79. si:dkey-222h21.11 ENSDARG00000092984 13 1 1.000 - - - - - - - - si:dkey-222h21.11 [Source:ZFIN;Acc:ZDB-GENE-081031-32]
80. zbtb14 ENSDARG00000098273 36 1 1.000 - - - - - - - - zinc finger and BTB domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-040426-2946]
81. rps6ka1 ENSDARG00000033437 366 1 - 1.000 - - - - - - - ribosomal protein S6 kinase a, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-060929-516]
82. aldh9a1a.2 ENSDARG00000055331, ENSDARG00000117162 45 1 1.000 - - - - - - - - aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-081104-507]
83. wnt2 ENSDARG00000041117, ENSDARG00000115436 242 1 - 1.000 - - - - - - - wingless-type MMTV integration site family member 2 [Source:ZFIN;Acc:ZDB-GENE-980526-416]
84. fgfr1b ENSDARG00000011190 10 1 1.000 - - - - - - - - fibroblast growth factor receptor 1b [Source:ZFIN;Acc:ZDB-GENE-060503-14]
85. FNDC3A ENSDARG00000105503 11 1 - 1.000 - - - - - - - fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
86. adra2c ENSDARG00000069669, ENSDARG00000109788, ENSDARG00000110072 61 0.997 0.997 - - - - - - - - adrenoceptor alpha 2C [Source:ZFIN;Acc:ZDB-GENE-021010-3]
87. si:dkey-253d23.3 ENSDARG00000095643 66 0.996 0.996 - - - - - - - - si:dkey-253d23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-330]
88. znf692 ENSDARG00000078434 137 0.996 0.996 - - - - - - - - zinc finger protein 692 [Source:ZFIN;Acc:ZDB-GENE-081104-484]
89. RCVRN RCVRN 66 0.995 0.995 - - - - - - - -
90. slc13a3 ENSDARG00000069478, ENSDARG00000115362 100 0.993 0.993 - - - - - - - - solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2486]
91. U6_18 U6_18 12 0.992 - - - - 0.992 - - - -
92. BX004816.4 BX004816.4 33 0.992 - - - 0.992 - - - - -
93. mei4 ENSDARG00000043912 10 0.991 - - - 0.991 - - - - - meiosis-specific, MEI4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040724-211]
94. CR339053.3 CR339053.3 244 0.991 0.991 - - - - - - - -
95. si:dkeyp-110e4.11 ENSDARG00000071585 148 0.991 0.991 - - - - - - - - si:dkeyp-110e4.11 [Source:ZFIN;Acc:ZDB-GENE-070424-267]
96. RPS11 ENSDARG00000053058 32 0.99 - - - - 0.990 - - - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
97. LRTM1 ENSDARG00000098742 21 0.99 - - - - 0.990 - - - - leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]
98. crygm2d16 ENSDARG00000076790 129 0.989 - - - - 0.989 - - - - crystallin, gamma M2d16 [Source:ZFIN;Acc:ZDB-GENE-071004-53]
99. alox5ap ENSDARG00000054755, ENSDARG00000113460 52 0.988 0.988 - - - - - - - - arachidonate 5-lipoxygenase-activating protein [Source:ZFIN;Acc:ZDB-GENE-030131-9322]
100. zgc:165582 ENSDARG00000074362 198 0.988 0.988 - - - - - - - - zgc:165582 [Source:ZFIN;Acc:ZDB-GENE-070820-9]

There are 1152 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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