Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RNF38

Gene Name Gene ID Reads Annotation
RNF38 ENSGALG00000015311 506 ring finger protein 38 [Source:HGNC Symbol;Acc:HGNC:18052]











Genes with expression patterns similar to RNF38

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RNF38 ENSGALG00000015311 506 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 ring finger protein 38 [Source:HGNC Symbol;Acc:HGNC:18052]
2. SCAF8 ENSGALG00000013635 421 1.553 - - - - - 0.792 - 0.761 - - SR-related CTD associated factor 8 [Source:HGNC Symbol;Acc:HGNC:20959]
3. WHAMM ENSGALG00000006002 1678 1.499 - - - - - 0.789 0.710 - - - WAS protein homolog associated with actin, golgi membranes and microtubules [Source:HGNC Symbol;Acc:HGNC:30493]
4. WDR59 ENSGALG00000002798 815 1.459 - - - - - 0.728 0.731 - - - WD repeat domain 59 [Source:NCBI gene;Acc:415688]
5. CREG1 ENSGALG00000040426 1188 1.422 - - - - - 0.702 0.720 - - - cellular repressor of E1A stimulated genes 1 [Source:NCBI gene;Acc:768680]
6. TPCN3 ENSGALG00000008198 124 0.864 - - - - - 0.864 - - - - two-pore calcium channel 3 [Source:NCBI gene;Acc:421224]
7. PACSIN2 ENSGALG00000014159 601 0.855 - - - - - 0.855 - - - - protein kinase C and casein kinase substrate in neurons 2 [Source:NCBI gene;Acc:395975]
8. DEPDC7 ENSGALG00000011681 1181 0.851 - - - - - - 0.851 - - - DEP domain containing 7 [Source:NCBI gene;Acc:421593]
9. PYGB ENSGALG00000008508 2812 0.85 - - - - - 0.850 - - - - glycogen phosphorylase B [Source:NCBI gene;Acc:421248]
10. ACTN2 ENSGALG00000014463 1724 0.844 - - - - - 0.844 - - - - actinin alpha 2 [Source:NCBI gene;Acc:396263]
11. TTC7A ENSGALG00000010020 793 0.838 - - - - - 0.838 - - - - tetratricopeptide repeat domain 7A [Source:NCBI gene;Acc:421414]
12. EFCAB10 ENSGALG00000045949 514 0.838 - - - - - 0.838 - - - - EF-hand calcium binding domain 10 [Source:HGNC Symbol;Acc:HGNC:34531]
13. LEMD3 ENSGALG00000009873 347 0.837 - - - - - 0.837 - - - - LEM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28887]
14. MICAL3 ENSGALG00000013042 90 0.837 - - - - - - 0.837 - - - microtubule associated monooxygenase, calponin and LIM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24694]
15. GRB2 ENSGALG00000008016 216 0.837 - - - - - 0.837 - - - - growth factor receptor bound protein 2 [Source:NCBI gene;Acc:386572]
16. MGAT4B ENSGALG00000005924 2663 0.831 - - - - - 0.831 - - - - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [Source:HGNC Symbol;Acc:HGNC:7048]
17. GPR180 ENSGALG00000016897 1545 0.826 - - - - - - 0.826 - - - G protein-coupled receptor 180 [Source:HGNC Symbol;Acc:HGNC:28899]
18. PXDNL ENSGALG00000036838 548 0.825 - - - - - 0.825 - - - - peroxidasin like, transcript variant X1
19. CD200 ENSGALG00000015396 304 0.822 - - - - - 0.822 - - - - CD200 molecule [Source:NCBI gene;Acc:418425]
20. CNTN1 ENSGALG00000009523 158 0.822 - - - - - - 0.822 - - - contactin 1 [Source:NCBI gene;Acc:417786]
21. GYPC ENSGALG00000011566 99 0.821 - - - - - 0.821 - - - - glycophorin C (Gerbich blood group) [Source:NCBI gene;Acc:424230]
22. KLHL40 ENSGALG00000005292 61 0.819 - - - - - 0.819 - - - - kelch like family member 40 [Source:HGNC Symbol;Acc:HGNC:30372]
23. RAC3 ENSGALG00000040606 355 0.818 - - - - - 0.818 - - - - Rac family small GTPase 3 [Source:NCBI gene;Acc:395870]
24. DTNBP1 ENSGALG00000012703 539 0.817 - - - - - - 0.817 - - - dystrobrevin binding protein 1 [Source:NCBI gene;Acc:420840]
25. LEPRE1 LEPRE1 156 0.817 - - - - - 0.817 - - - -
26. UBAC2 ENSGALG00000016880 1343 0.816 - - - - - - 0.816 - - - UBA domain containing 2 [Source:NCBI gene;Acc:418778]
27. CLASP1 ENSGALG00000011645 1378 0.815 - - - - - 0.815 - - - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
28. TMEM150C ENSGALG00000011175 218 0.815 - - - - - - 0.815 - - - transmembrane protein 150C [Source:HGNC Symbol;Acc:HGNC:37263]
29. DSEL ENSGALG00000042505 92 0.814 - - - - - 0.814 - - - - dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
30. C9orf96 C9orf96 43 0.814 - - - - - 0.814 - - - -
31. OLFML1 ENSGALG00000027184 19 0.814 - - - - - 0.814 - - - - olfactomedin like 1 [Source:HGNC Symbol;Acc:HGNC:24473]
32. ABCC3 ENSGALG00000007522 340 0.813 - - - - - 0.813 - - - - ATP binding cassette subfamily C member 3, transcript variant X5
33. DRD4 ENSGALG00000040761 79 0.813 - - - - - 0.813 - - - - dopamine receptor D4 [Source:NCBI gene;Acc:423016]
34. SH2D1B ENSGALG00000028448 17 0.813 - - - - - 0.813 - - - - SH2 domain containing 1B [Source:NCBI gene;Acc:418411]
35. ELMSAN1 ENSGALG00000009282 79 0.813 - - - - - 0.813 - - - - ELM2 and Myb/SANT domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19853]
36. KIF7 ENSGALG00000006611 33 0.813 - - - - - 0.813 - - - - kinesin family member 7 [Source:HGNC Symbol;Acc:HGNC:30497]
37. EPHB1 ENSGALG00000006609 346 0.813 - - - - - - 0.813 - - - EPH receptor B1, transcript variant X2
38. KIAA1324L ENSGALG00000030324 1695 0.812 - - - - - 0.812 - - - - KIAA1324 like [Source:HGNC Symbol;Acc:HGNC:21945]
39. ADNP2 ENSGALG00000035669 318 0.811 - - - - - 0.811 - - - - ADNP homeobox 2 [Source:HGNC Symbol;Acc:HGNC:23803]
40. GPD1L2 ENSGALG00000012061 31 0.81 - - - - - 0.810 - - - - glycerol-3-phosphate dehydrogenase 1-like 2
41. SKI ENSGALG00000001229 50 0.809 - - - - - - 0.809 - - - SKI proto-oncogene [Source:NCBI gene;Acc:428181]
42. MAN1B1 ENSGALG00000037375 308 0.809 - - - - - - 0.809 - - - mannosidase alpha class 1B member 1 [Source:HGNC Symbol;Acc:HGNC:6823]
43. C20orf26 C20orf26 69 0.808 - - 0.808 - - - - - - -
44. BYSL ENSGALG00000003467 7555 0.807 - - - - - 0.807 - - - - bystin like [Source:HGNC Symbol;Acc:HGNC:1157]
45. HJURP ENSGALG00000015363 54 0.807 - - - - - 0.807 - - - - Holliday junction recognition protein [Source:NCBI gene;Acc:418413]
46. ACN9 ACN9 269 0.807 - - - - - 0.807 - - - -
47. DHX35 ENSGALG00000003658 1090 0.806 - - - - - - 0.806 - - - DEAH-box helicase 35 [Source:HGNC Symbol;Acc:HGNC:15861]
48. ENSGALG00000026659 ENSGALG00000026659 131 0.805 - - - - - - 0.805 - - -
49. NIPAL4 ENSGALG00000039687 29 0.804 - - - - - 0.804 - - - - NIPA like domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28018]
50. ENSGALG00000014545 ENSGALG00000014545 285 0.804 - - - - - 0.804 - - - -
51. RNF214 ENSGALG00000036993 3729 0.804 - - - - - 0.804 - - - - ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
52. USP37 ENSGALG00000011427 280 0.803 - - - - - 0.803 - - - - ubiquitin specific peptidase 37 [Source:NCBI gene;Acc:424216]
53. SPSB3 ENSGALG00000002285 1329 0.803 - - - - - 0.803 - - - - splA/ryanodine receptor domain and SOCS box containing 3 [Source:HGNC Symbol;Acc:HGNC:30629]
54. PON2 ENSGALG00000009689 1416 0.803 - - - - - 0.803 - - - - paraoxonase 2 [Source:NCBI gene;Acc:395830]
55. GCHFR ENSGALG00000032239 1608 0.801 - - - - - 0.801 - - - - GTP cyclohydrolase I feedback regulator [Source:NCBI gene;Acc:423003]
56. QARS ENSGALG00000029980 4207 0.801 - - - - - - 0.801 - - - glutaminyl-tRNA synthetase [Source:NCBI gene;Acc:416057]
57. PKP1 ENSGALG00000000299 155 0.799 - - - - - - 0.799 - - - plakophilin 1 [Source:HGNC Symbol;Acc:HGNC:9023]
58. C1orf168 C1orf168 98 0.798 - - - - - 0.798 - - - -
59. CELF1 ENSGALG00000008097 4717 0.798 - - - - - 0.798 - - - - CUGBP Elav-like family member 1 [Source:NCBI gene;Acc:373923]
60. MCC ENSGALG00000000208 61 0.798 - - - - - 0.798 - - - - MCC, WNT signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:6935]
61. LOC419851 ENSGALG00000023953 80 0.798 - - - - - 0.798 - - - - complement component 4 binding protein, alpha chain
62. CAPRIN1 ENSGALG00000013532 1699 0.795 - - - - - - 0.795 - - - cell cycle associated protein 1 [Source:NCBI gene;Acc:426151]
63. FAM177A1 ENSGALG00000010046 4318 0.795 - - - - - 0.795 - - - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
64. YTHDF1 ENSGALG00000005745 135 0.794 - - - - - 0.794 - - - - YTH N6-methyladenosine RNA binding protein 1 [Source:NCBI gene;Acc:419238]
65. BLVRA ENSGALG00000031786 23 0.793 - - - - - 0.793 - - - - biliverdin reductase A [Source:HGNC Symbol;Acc:HGNC:1062]
66. CFH ENSGALG00000002431 31 0.792 - - - - - - 0.792 - - - complement factor H, transcript variant X1
67. ZC3H12C ENSGALG00000017154 59 0.792 - - - - - - 0.792 - - - zinc finger CCCH-type containing 12C [Source:HGNC Symbol;Acc:HGNC:29362]
68. WARS ENSGALG00000011228 193 0.791 - - - - - 0.791 - - - - tryptophanyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:12729]
69. FIGNL1 ENSGALG00000026363 2194 0.791 - - - - - 0.791 - - - - fidgetin like 1, transcript variant X2
70. PRKDC ENSGALG00000042469 449 0.791 - - - - - 0.791 - - - - protein kinase, DNA-activated, catalytic polypeptide [Source:NCBI gene;Acc:395376]
71. TMEM63A ENSGALG00000009275 1481 0.79 - - - - - 0.790 - - - - transmembrane protein 63A [Source:HGNC Symbol;Acc:HGNC:29118]
72. HSF3 ENSGALG00000040662 140 0.79 - - - - - - 0.790 - - - Heat shock factor protein 3 [Source:NCBI gene;Acc:422169]
73. C26H6ORF89 C26H6ORF89 1826 0.79 - - - - - - 0.790 - - -
74. ATG10 ENSGALG00000027714 1100 0.789 - - - - - 0.789 - - - - autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]
75. AQP1 ENSGALG00000005209 111 0.789 - - - - - 0.789 - - - - aquaporin 1 [Source:NCBI gene;Acc:420384]
76. SERPINF2 ENSGALG00000002987 236 0.788 - - - - - 0.788 - - - - serpin family F member 2 [Source:HGNC Symbol;Acc:HGNC:9075]
77. GTF3C4 ENSGALG00000031016 1221 0.788 - - - - - 0.788 - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
78. ENSGALG00000003817 ENSGALG00000003817 45 0.788 - - - - - - 0.788 - - -
79. NBEAL2 ENSGALG00000039120 277 0.788 - - - - - - 0.788 - - - neurobeachin like 2 [Source:HGNC Symbol;Acc:HGNC:31928]
80. WBP2NL ENSGALG00000011908 23 0.787 - - - - - - 0.787 - - - Gallus gallus WBP2 N-terminal like (WBP2NL), mRNA. [Source:RefSeq mRNA;Acc:NM_001318465]
81. C5NT1AL ENSGALG00000006608 277 0.787 - - - - - - 0.787 - - - cytosolic 5'-nucleotidase 1A-like, transcript variant X2
82. SMOC2 ENSGALG00000011205 340 0.786 - - - - - 0.786 - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
83. CVG1 CVG1 636 0.786 - - - - - - 0.786 - - -
84. C19H17ORF85 C19H17ORF85 2538 0.784 - - - - - 0.784 - - - -
85. CDC14A ENSGALG00000005248 502 0.784 - - - - - 0.784 - - - - cell division cycle 14A [Source:NCBI gene;Acc:424466]
86. RALGAPA2 240 0.784 - - - - - - 0.784 - - - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
87. CCDC135 CCDC135 220 0.783 - - - - - - 0.783 - - -
88. LTC4SL ENSGALG00000011450 645 0.783 - - - - - 0.783 - - - - leukotriene C4 synthase-like, transcript variant X3
89. EVC2 ENSGALG00000015029 51 0.782 - - - - - 0.782 - - - - EvC ciliary complex subunit 2 [Source:NCBI gene;Acc:770095]
90. GOLGA1 ENSGALG00000001025 334 0.782 - - - - - 0.782 - - - - golgin A1 [Source:HGNC Symbol;Acc:HGNC:4424]
91. NCBP2 ENSGALG00000006843 938 0.782 - - - - - - 0.782 - - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
92. DDX46 ENSGALG00000006404 8765 0.781 - - - - - - 0.781 - - - DEAD-box helicase 46 [Source:HGNC Symbol;Acc:HGNC:18681]
93. C8G ENSGALG00000040644 443 0.781 - - - - - - 0.781 - - - complement C8 gamma chain [Source:HGNC Symbol;Acc:HGNC:1354]
94. CSTF1 ENSGALG00000007757 789 0.78 - - - - - - 0.780 - - - cleavage stimulation factor subunit 1 [Source:HGNC Symbol;Acc:HGNC:2483]
95. PYGO1 ENSGALG00000004369 527 0.779 - - - - - - 0.779 - - - pygopus family PHD finger 1 [Source:NCBI gene;Acc:415408]
96. POLB ENSGALG00000040828 7462 0.779 - - - - - 0.779 - - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
97. HIST1H111R ENSGALG00000011783 1513 0.779 - - - - - - 0.779 - - - histone cluster 1, H1.11R [Source:NCBI gene;Acc:427896]
98. CTSB ENSGALG00000030016 177 0.779 - - - - - - 0.779 - - - cathepsin B [Source:NCBI gene;Acc:396329]
99. GPSM2 ENSGALG00000002090 50 0.778 - - - - - - 0.778 - - - G protein signaling modulator 2 [Source:HGNC Symbol;Acc:HGNC:29501]
100. ASCC3 ENSGALG00000015465 259 0.778 - - - - - 0.778 - - - - activating signal cointegrator 1 complex subunit 3 [Source:NCBI gene;Acc:421790]

There are 153 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA