Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RNF38

Gene Name Gene ID Reads Annotation
RNF38 ENSDARG00000062055 3901 ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]










Genes with expression patterns similar to RNF38

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RNF38 ENSDARG00000062055 3901 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
2. C7H4orf48 C7H4orf48 1455 2.565 - - - - 0.991 0.867 - 0.707 -
3. pl10 pl10 10795 2.528 - - - - - 0.768 0.791 - 0.969
4. rmnd5b ENSDARG00000043359 3054 2.506 - - - - 0.940 0.844 0.722 - - required for meiotic nuclear division 5 homolog B [Source:ZFIN;Acc:ZDB-GENE-040426-1744]
5. pou2f1b ENSDARG00000007996 2172 2.493 - 0.799 - - 0.994 - 0.700 - - POU class 2 homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2422]
6. h2afy2_1 ENSDARG00000087897 9887 2.483 - - - - 0.927 0.833 0.723 - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
7. uba1 ENSDARG00000037559 11579 2.463 - - - - - 0.714 0.812 - 0.937 ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
8. arid1aa ENSDARG00000101710 3644 2.424 - 0.721 - - 0.892 0.811 - - - AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
9. CYTH2 ENSDARG00000028800 2349 2.415 - 0.799 0.724 - - 0.892 - - - cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
10. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 2.413 - - - - 0.811 0.838 0.764 - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
11. ptenb ENSDARG00000056623 5783 2.363 - - - - 0.866 0.747 0.750 - - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
12. ddx19 ENSDARG00000005699 4602 2.355 - - - - 0.895 0.725 0.735 - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
13. ARFGAP1 ENSDARG00000101616 2952 2.317 - 0.731 - - - 0.816 0.770 - - ADP-ribosylation factor GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-041114-130]
14. dlgap4a ENSDARG00000060849 1813 2.309 - 0.747 - - - 0.774 - 0.788 - discs, large (Drosophila) homolog-associated protein 4a [Source:ZFIN;Acc:ZDB-GENE-080219-51]
15. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 2.301 - - - 0.713 0.856 0.732 - - - POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
16. tmeff1b ENSDARG00000056740 11253 2.291 - - - - 0.819 0.752 0.720 - - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
17. ca16b ENSDARG00000060123 389 2.284 0.729 0.792 - - - 0.763 - - - carbonic anhydrase XVI b [Source:ZFIN;Acc:ZDB-GENE-080818-1]
18. ylpm1 ENSDARG00000043680 7676 2.258 - 0.752 0.744 - - - 0.762 - - YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
19. lypla2 ENSDARG00000053656 8971 2.227 - - - 0.726 - 0.771 0.730 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
20. polr2a ENSDARG00000099966 5706 2.169 - 0.721 0.706 - - 0.742 - - - polymerase (RNA) II (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-041008-78]
21. tead1a ENSDARG00000028159 3574 1.974 - - - - 0.987 - - - 0.987 TEA domain family member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2101]
22. scocb ENSDARG00000002217 1844 1.87 - - - - 0.992 0.878 - - - short coiled-coil protein b [Source:ZFIN;Acc:ZDB-GENE-041010-41]
23. api5 ENSDARG00000033597 6655 1.869 - - - - 0.892 - - - 0.977 apoptosis inhibitor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-395]
24. plp1a ENSDARG00000103732 3544 1.815 - - - - 0.957 0.858 - - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
25. CDCA4 ENSDARG00000042319 7918 1.809 - - - - - 0.855 - - 0.954 cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
26. kif2c ENSDARG00000076228 2281 1.804 - 0.825 - - - - - - 0.979 kinesin family member 2C [Source:ZFIN;Acc:ZDB-GENE-070912-298]
27. si:ch211-132g1.3 ENSDARG00000089477 769 1.798 - 0.808 - - 0.990 - - - - si:ch211-132g1.3 [Source:ZFIN;Acc:ZDB-GENE-090312-148]
28. fmnl2b ENSDARG00000075041 1744 1.791 - - - 0.822 0.969 - - - - formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
29. scrt2 ENSDARG00000056175 4331 1.785 - - - - - 0.821 - - 0.964 scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
30. cand1 ENSDARG00000017841 8164 1.781 - - - - 0.988 0.793 - - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
31. ube2e1 ENSDARG00000116649 10656 1.775 - - - - - 0.803 - - 0.972 ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
32. lppr3a lppr3a 1294 1.773 - - - - 0.990 0.783 - - -
33. cercam ENSDARG00000079049, ENSDARG00000109573 2228 1.771 - - - - 0.989 - 0.782 - - cerebral endothelial cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-030131-9787]
34. ARHGAP23 ARHGAP23 3946 1.77 - 0.791 - - 0.979 - - - -
35. cxcl14 ENSDARG00000056627, ENSDARG00000113190 4665 1.769 - 0.808 - - - - - - 0.961 chemokine (C-X-C motif) ligand 14 [Source:ZFIN;Acc:ZDB-GENE-000619-1]
36. sipa1l2 ENSDARG00000061640 4545 1.766 - - - - 0.973 0.793 - - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
37. tubg1 ENSDARG00000015610 2433 1.762 - 0.770 - - 0.992 - - - - tubulin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-836]
38. acin1a ENSDARG00000054290 14023 1.758 - - - - - - 0.865 - 0.893 apoptotic chromatin condensation inducer 1a [Source:ZFIN;Acc:ZDB-GENE-030616-583]
39. id4 ENSDARG00000045131 2916 1.757 - - - - - 0.769 - - 0.988 inhibitor of DNA binding 4 [Source:ZFIN;Acc:ZDB-GENE-051113-208]
40. MRPL51 ENSDARG00000041340, ENSDARG00000113440 1544 1.74 - 0.751 - - 0.989 - - - - mitochondrial ribosomal protein L51 [Source:ZFIN;Acc:ZDB-GENE-050320-40]
41. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.739 - - - - - - 0.770 - 0.969 alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
42. MAPRE2 ENSDARG00000099943 3041 1.738 - - - - 0.988 - 0.750 - - microtubule-associated protein, RP/EB family, member 2 [Source:ZFIN;Acc:ZDB-GENE-071004-41]
43. ndrg3a ENSDARG00000013087 5581 1.725 - - - - - 0.749 - - 0.976 ndrg family member 3a [Source:ZFIN;Acc:ZDB-GENE-980526-124]
44. rad21a_1 ENSDARG00000006092 4482 1.724 - - - - - - 0.744 - 0.980 RAD21 cohesin complex component a [Source:ZFIN;Acc:ZDB-GENE-030131-994]
45. prmt5 ENSDARG00000079605, ENSDARG00000116785 4676 1.72 - - - - 0.740 - - - 0.980 protein arginine methyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-030616-585]
46. magt1 ENSDARG00000058062 3903 1.716 - 0.747 - - 0.969 - - - - magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
47. e2f7 ENSDARG00000008986 1439 1.714 - - - 0.720 0.994 - - - - E2F transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-030131-3527]
48. si:ch211-198b3.1 si:ch211-198b3.1 765 1.71 - 0.834 - 0.876 - - - - -
49. dctn5 ENSDARG00000003573 1100 1.709 - - - - - 0.729 - - 0.980 dynactin 5 [Source:ZFIN;Acc:ZDB-GENE-040718-201]
50. shfm1 7620 1.706 - - - - - 0.726 - - 0.980 split hand/foot malformation (ectrodactyly) type 1
51. rhot1a ENSDARG00000099996 2059 1.701 0.711 - - - 0.990 - - - - ras homolog family member T1a [Source:ZFIN;Acc:ZDB-GENE-030131-5354]
52. RNF145 RNF145 1364 1.7 - - - - - - 0.719 - 0.981
53. safb ENSDARG00000020467 5608 1.695 - 0.730 - - 0.965 - - - - scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
54. spryd4 ENSDARG00000023309, ENSDARG00000114062 2091 1.692 - - - - 0.987 - 0.705 - - SPRY domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-180]
55. acap3a ENSDARG00000075990 9652 1.689 - - - - - - 0.718 - 0.971 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1711]
56. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 1.689 - - - - 0.956 0.733 - - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
57. mpp6b ENSDARG00000029761 2142 1.688 - - - - 0.987 - 0.701 - - membrane protein, palmitoylated 6b (MAGUK p55 subfamily member 6) [Source:ZFIN;Acc:ZDB-GENE-040426-775]
58. fam96b 2255 1.686 - - - - - 0.706 - - 0.980 family with sequence similarity 96, member B
59. srrm1 ENSDARG00000001244 4972 1.684 - - - - 0.837 - 0.847 - - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
60. si:dkey-42i9.4 ENSDARG00000008049 4752 1.682 - - - - - - 0.705 - 0.977 si:dkey-42i9.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8398]
61. mtdha ENSDARG00000014159, ENSDARG00000115030 9903 1.682 - - - - - 0.740 - - 0.942 metadherin a [Source:ZFIN;Acc:ZDB-GENE-030616-615]
62. nkx6.1 ENSDARG00000022569 3779 1.682 - - - 0.702 0.980 - - - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
63. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.673 - - - - - 0.869 0.804 - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
64. ctbp2 ctbp2 3255 1.667 - - - - - 0.929 0.738 - -
65. FP016176.1 FP016176.1 7030 1.665 - - - - 0.884 - 0.781 - -
66. CBFA2T3 ENSDARG00000079012 6799 1.663 - - - - - - 0.738 - 0.925 core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
67. smarce1 ENSDARG00000016871 9628 1.661 - - - - - 0.902 0.759 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
68. atxn2l ENSDARG00000011597, ENSDARG00000112336 2104 1.657 - 0.821 - - - 0.836 - - - ataxin 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-3246]
69. tspan5a ENSDARG00000086033 1865 1.656 - - - - - 0.890 0.766 - - tetraspanin 5a [Source:ZFIN;Acc:ZDB-GENE-041010-145]
70. hoxa9a ENSDARG00000105013 1509 1.652 - - - - - 0.840 0.812 - - homeobox A9a [Source:ZFIN;Acc:ZDB-GENE-000823-1]
71. GATAD2B ENSDARG00000005834 3855 1.652 - - - - - 0.835 0.817 - - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
72. gars ENSDARG00000059070 17015 1.651 - - - 0.758 0.893 - - - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
73. nr2f6b ENSDARG00000003165 5855 1.65 - - - - 0.860 - 0.790 - - nuclear receptor subfamily 2, group F, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-2351]
74. myh10 ENSDARG00000000103 7522 1.647 - - - - 0.872 0.775 - - - myosin, heavy chain 10, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030616-162]
75. pknox1.1_1 ENSDARG00000018765 203 1.644 - - - 0.846 - 0.798 - - - pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
76. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 1.642 - - - - 0.889 0.753 - - - minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
77. si:ch73-46j18.5 ENSDARG00000092467 6002 1.639 - - - - 0.868 - 0.771 - - si:ch73-46j18.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7892]
78. h2afva ENSDARG00000068820 16427 1.639 - - - - 0.846 - 0.793 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
79. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.638 - - - 0.758 - 0.880 - - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
80. clstn1 ENSDARG00000031720 5286 1.636 - - - - 0.931 - 0.705 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
81. khsrp ENSDARG00000026489 15738 1.632 0.711 - - - - 0.921 - - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
82. bcl11ab ENSDARG00000063153 3032 1.63 - - - - - 0.908 0.722 - - B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
83. hcfc1b ENSDARG00000012519 3633 1.63 - - - - - 0.870 0.760 - - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
84. vezf1a ENSDARG00000008247 1449 1.63 - - - - - 0.840 0.790 - - vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
85. hmp19 2554 1.63 - - - - - 0.892 - 0.738 - HMP19 protein
86. bub1bb ENSDARG00000074927 1667 1.627 - 0.850 - - - 0.777 - - - BUB1 mitotic checkpoint serine/threonine kinase Bb [Source:ZFIN;Acc:ZDB-GENE-030829-51]
87. rnf10 ENSDARG00000079687 6768 1.626 - - - 0.849 - - 0.777 - - ring finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2969]
88. tdg tdg 3269 1.62 - - - - - 0.869 0.751 - -
89. si:ch73-21g5.7 ENSDARG00000093156 9412 1.619 - - - 0.737 - 0.882 - - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
90. hoxb1b ENSDARG00000054033, ENSDARG00000112663 1967 1.614 0.706 - - - - 0.908 - - - homeobox B1b [Source:ZFIN;Acc:ZDB-GENE-980526-290]
91. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 1.612 - - - - - 0.876 0.736 - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
92. esm1 ENSDARG00000104370 186 1.61 - 0.805 - - - 0.805 - - - endothelial cell-specific molecule 1 [Source:ZFIN;Acc:ZDB-GENE-060929-748]
93. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.608 - - - - - 0.899 0.709 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
94. rac3b ENSDARG00000020795 1523 1.607 - 0.827 - - - 0.780 - - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
95. calm1a ENSDARG00000021811 4791 1.606 - - - - - 0.812 0.794 - - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
96. nusap1 ENSDARG00000002403 6953 1.606 - - - - - 0.870 0.736 - - nucleolar and spindle associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030827-5]
97. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.606 - - - - - 0.881 0.725 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
98. wu:fb30e12 wu:fb30e12 1254 1.605 - - - 0.839 - 0.766 - - -
99. sppl2 ENSDARG00000030448 1040 1.602 - - - - - 0.824 0.778 - - signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
100. pak2b ENSDARG00000018476 4331 1.601 - - - - - 0.794 0.807 - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]

There are 2098 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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