Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RNF216

Gene Name Gene ID Reads Annotation
RNF216 ENSGALG00000004629 84 ring finger protein 216 [Source:HGNC Symbol;Acc:HGNC:21698]











Genes with expression patterns similar to RNF216

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RNF216 ENSGALG00000004629 84 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 ring finger protein 216 [Source:HGNC Symbol;Acc:HGNC:21698]
2. ATMIN ENSGALG00000040475 16 1.657 - - 0.913 - - - 0.744 - - - ATM interactor [Source:HGNC Symbol;Acc:HGNC:29034]
3. GLUL ENSGALG00000043754 71 1.535 - - 0.791 - - - 0.744 - - - glutamate-ammonia ligase [Source:NCBI gene;Acc:396489]
4. HECTD2 ENSGALG00000038043 177 1 - - - - - - 1.000 - - - HECT domain E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:26736]
5. RC3H2 ENSGALG00000001253 18 1 - - - - - - - 1.000 - - ring finger and CCCH-type domains 2 [Source:HGNC Symbol;Acc:HGNC:21461]
6. ERCC6L2 ENSGALG00000012621 77 0.962 - - - - - - - 0.962 - - excision repair cross-complementation group 6 like 2, transcript variant X8
7. ENSGALG00000004753 ENSGALG00000004753 63 0.94 - - - - - - - 0.940 - -
8. PTPRE ENSGALG00000009823 250 0.922 - - 0.922 - - - - - - - protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
9. ENSGALG00000026496 ENSGALG00000026496 9 0.92 - - 0.920 - - - - - - -
10. PARK2 166 0.919 - - 0.919 - - - - - - - parkin RBR E3 ubiquitin protein ligase
11. TET2 ENSGALG00000010592 143 0.916 - - - - - - 0.916 - - - tet methylcytosine dioxygenase 2 [Source:NCBI gene;Acc:422540]
12. OSGIN1 ENSGALG00000003323 7 0.913 - - 0.913 - - - - - - - oxidative stress induced growth inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:30093]
13. AOX1 ENSGALG00000008185 14 0.913 - - 0.913 - - - - - - - aldehyde oxidase 1 [Source:NCBI gene;Acc:424071]
14. ADCYAP1 ENSGALG00000014858 9 0.913 - - 0.913 - - - - - - - adenylate cyclase activating polypeptide 1 [Source:NCBI gene;Acc:408251]
15. LOC771308 ENSGALG00000000274 7 0.913 - - 0.913 - - - - - - - growth hormone releasing hormone receptor, transcript variant X2
16. MMR1L2 ENSGALG00000028357 7 0.913 - - 0.913 - - - - - - - Gallus gallus macrophage mannose receptor 1-like 2 (MMR1L2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319010]
17. TEX33 ENSGALG00000012490 11 0.913 - - 0.913 - - - - - - - testis expressed 33, transcript variant X2
18. RAB3C ENSGALG00000014726 10 0.913 - - 0.913 - - - - - - - RAB3C, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30269]
19. SGMS2 ENSGALG00000010535 42 0.913 - - 0.913 - - - - - - - sphingomyelin synthase 2 [Source:NCBI gene;Acc:422529]
20. FAR-2 FAR-2 24 0.911 - - 0.911 - - - - - - -
21. FASTK ENSGALG00000033058 21 0.909 - - 0.909 - - - - - - - Fas activated serine/threonine kinase
22. ELFN2 ENSGALG00000012446 11 0.909 - - 0.909 - - - - - - - extracellular leucine rich repeat and fibronectin type III domain containing 2 [Source:HGNC Symbol;Acc:HGNC:29396]
23. CLDN15 ENSGALG00000038964 21 0.908 - - 0.908 - - - - - - - claudin 15, transcript variant X4
24. FGF7 ENSGALG00000028158 189 0.904 - - 0.904 - - - - - - - fibroblast growth factor 7 [Source:NCBI gene;Acc:415439]
25. SLC4A10 ENSGALG00000030032 56 0.898 - - 0.898 - - - - - - - solute carrier family 4 member 10 [Source:HGNC Symbol;Acc:HGNC:13811]
26. SCG2 ENSGALG00000029819 26 0.895 - - 0.895 - - - - - - - secretogranin II [Source:HGNC Symbol;Acc:HGNC:10575]
27. SK2 SK2 74 0.894 - - 0.894 - - - - - - -
28. SLC38A9 ENSGALG00000014712 16 0.893 - - 0.893 - - - - - - - solute carrier family 38 member 9 [Source:HGNC Symbol;Acc:HGNC:26907]
29. PTPRF ENSGALG00000010053 27 0.891 - - 0.891 - - - - - - - protein tyrosine phosphatase, receptor type F [Source:HGNC Symbol;Acc:HGNC:9670]
30. ACYP2 ENSGALG00000027632 90 0.89 - - - - - - - 0.890 - - acylphosphatase 2 [Source:NCBI gene;Acc:421217]
31. ALOX5 ENSGALG00000005857 73 0.889 - - 0.889 - - - - - - - arachidonate 5-lipoxygenase [Source:HGNC Symbol;Acc:HGNC:435]
32. ADAMTS12 55 0.889 - - 0.889 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
33. TRIM29 ENSGALG00000042360 34 0.887 - - 0.887 - - - - - - - tripartite motif containing 29 [Source:HGNC Symbol;Acc:HGNC:17274]
34. ENSGALG00000024048 ENSGALG00000024048 50 0.887 - - 0.887 - - - - - - -
35. ENSGALG00000004951 ENSGALG00000004951 18 0.884 - - 0.884 - - - - - - -
36. ENSGALG00000019522 ENSGALG00000019522 122 0.876 - - 0.876 - - - - - - -
37. CPPED1 ENSGALG00000040854 202 0.873 - - 0.873 - - - - - - - calcineurin like phosphoesterase domain containing 1 [Source:NCBI gene;Acc:416418]
38. ALG13 318 0.871 - - 0.871 - - - - - - - ALG13, UDP-N-acetylglucosaminyltransferase subunit
39. PIGM ENSGALG00000010768 41 0.871 - - - - - - - - - 0.871 phosphatidylinositol glycan anchor biosynthesis class M [Source:NCBI gene;Acc:428583]
40. C16orf72 ENSGALG00000007291 228 0.87 - - 0.870 - - - - - - - chromosome 16 open reading frame 72 [Source:HGNC Symbol;Acc:HGNC:30103]
41. S100A13 ENSGALG00000046614 201 0.869 - - 0.869 - - - - - - - S100 calcium binding protein A13 [Source:HGNC Symbol;Acc:HGNC:10490]
42. XK ENSGALG00000016262 60 0.869 - - 0.869 - - - - - - - X-linked Kx blood group [Source:NCBI gene;Acc:427991]
43. CD44 ENSGALG00000039080 100 0.867 - - 0.867 - - - - - - - CD44 molecule (Indian blood group) [Source:NCBI gene;Acc:395666]
44. GDAP2 ENSGALG00000014794 523 0.867 - - 0.867 - - - - - - - ganglioside induced differentiation associated protein 2 [Source:HGNC Symbol;Acc:HGNC:18010]
45. SEH1L ENSGALG00000013872 315 0.863 - - 0.863 - - - - - - - SEH1 like nucleoporin [Source:HGNC Symbol;Acc:HGNC:30379]
46. MIER2 ENSGALG00000001108 25 0.861 - - - - - - - 0.861 - - MIER family member 2 [Source:HGNC Symbol;Acc:HGNC:29210]
47. GUF1 ENSGALG00000014217 211 0.86 - - 0.860 - - - - - - - GUF1 homolog, GTPase [Source:HGNC Symbol;Acc:HGNC:25799]
48. PDE6G ENSGALG00000004514 231 0.853 - - 0.853 - - - - - - - phosphodiesterase 6G [Source:NCBI gene;Acc:395091]
49. CNR1 ENSGALG00000037511 38 0.85 - - - - - - - 0.850 - - cannabinoid receptor 1 [Source:NCBI gene;Acc:428633]
50. MAN1B1 ENSGALG00000037375 308 0.845 - - 0.845 - - - - - - - mannosidase alpha class 1B member 1 [Source:HGNC Symbol;Acc:HGNC:6823]
51. RNASEL ENSGALG00000042986 460 0.845 - - 0.845 - - - - - - - ribonuclease L [Source:NCBI gene;Acc:424410]
52. RDH11 ENSGALG00000009538 110 0.844 - - - - - - 0.844 - - - retinol dehydrogenase 11 [Source:HGNC Symbol;Acc:HGNC:17964]
53. CBLB ENSGALG00000015351 59 0.841 - - - - - - - 0.841 - - Cbl proto-oncogene B [Source:HGNC Symbol;Acc:HGNC:1542]
54. EOMES ENSGALG00000027247 27 0.841 - - - - - - 0.841 - - - Gallus gallus eomesodermin (EOMES), mRNA. [Source:RefSeq mRNA;Acc:NM_001321555]
55. CC2D1B ENSGALG00000010619 66 0.84 - - 0.840 - - - - - - - coiled-coil and C2 domain containing 1B [Source:HGNC Symbol;Acc:HGNC:29386]
56. OTUD1 ENSGALG00000026426 2120 0.839 - - 0.839 - - - - - - - OTU deubiquitinase 1 [Source:HGNC Symbol;Acc:HGNC:27346]
57. TADA2B ENSGALG00000015547 55 0.838 - - 0.838 - - - - - - - transcriptional adaptor 2B [Source:HGNC Symbol;Acc:HGNC:30781]
58. CAD ENSGALG00000016524 94 0.838 - - 0.838 - - - - - - - carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, transcript variant X2
59. TMEM206 ENSGALG00000009822 80 0.838 - - 0.838 - - - - - - - transmembrane protein 206 [Source:HGNC Symbol;Acc:HGNC:25593]
60. DMRT1 ENSGALG00000010160 425 0.836 - - 0.836 - - - - - - - doublesex and mab-3 related transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:2934]
61. PLEKHG4 ENSGALG00000023898 65 0.835 - - 0.835 - - - - - - - pleckstrin homology and RhoGEF domain containing G4 [Source:HGNC Symbol;Acc:HGNC:24501]
62. MAP3K21 ENSGALG00000011008 54 0.834 - - 0.834 - - - - - - - mitogen-activated protein kinase kinase kinase 21 [Source:HGNC Symbol;Acc:HGNC:29798]
63. SMYD2 ENSGALG00000009788 225 0.833 - - - - - - 0.833 - - - SET and MYND domain containing 2 [Source:NCBI gene;Acc:421361]
64. PPM1A ENSGALG00000011917 281 0.83 - - - - - - - 0.830 - - protein phosphatase, Mg2+/Mn2+ dependent 1A [Source:HGNC Symbol;Acc:HGNC:9275]
65. PQLC3 ENSGALG00000016449 39 0.83 - - 0.830 - - - - - - - PQ loop repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:28503]
66. TMEM17 ENSGALG00000026491 1000 0.83 - - 0.830 - - - - - - - transmembrane protein 17 [Source:NCBI gene;Acc:421284]
67. ZC3H12B ENSGALG00000039391 39 0.829 - - 0.829 - - - - - - - zinc finger CCCH-type containing 12B [Source:HGNC Symbol;Acc:HGNC:17407]
68. MTOR ENSGALG00000003339 328 0.829 - - 0.829 - - - - - - - mechanistic target of rapamycin kinase [Source:HGNC Symbol;Acc:HGNC:3942]
69. SV2B ENSGALG00000030250 164 0.824 - - 0.824 - - - - - - - synaptic vesicle glycoprotein 2B [Source:HGNC Symbol;Acc:HGNC:16874]
70. PAX2 ENSGALG00000005689 351 0.82 - - 0.820 - - - - - - - paired box 2 [Source:NCBI gene;Acc:395574]
71. RINT1 ENSGALG00000008123 1064 0.817 - - 0.817 - - - - - - - RAD50 interactor 1 [Source:NCBI gene;Acc:427848]
72. ACOT6 ENSGALG00000009292 38 0.816 - - - - - - - 0.816 - - acyl-CoA thioesterase 6 [Source:HGNC Symbol;Acc:HGNC:33159]
73. CABP2 ENSGALG00000037497 329 0.816 - - - - - - 0.816 - - - calcium binding protein 2 [Source:NCBI gene;Acc:429967]
74. GPR20 ENSGALG00000041730 1926 0.814 - - 0.814 - - - - - - - G protein-coupled receptor 20 [Source:HGNC Symbol;Acc:HGNC:4475]
75. FAM104A ENSGALG00000026401 162 0.812 - - 0.812 - - - - - - - family with sequence similarity 104 member A [Source:NCBI gene;Acc:417450]
76. CENPL ENSGALG00000038411 4867 0.812 - - 0.812 - - - - - - - centromere protein L [Source:NCBI gene;Acc:426563]
77. GRB10 ENSGALG00000013100 37 0.812 - - 0.812 - - - - - - - growth factor receptor bound protein 10 [Source:NCBI gene;Acc:420948]
78. RNF150 ENSGALG00000009865 80 0.811 - - 0.811 - - - - - - - ring finger protein 150 [Source:HGNC Symbol;Acc:HGNC:23138]
79. COL24A1 ENSGALG00000006864 161 0.811 - - 0.811 - - - - - - - collagen type XXIV alpha 1 chain, transcript variant X4
80. FBXW4 ENSGALG00000043428 300 0.81 - - 0.810 - - - - - - - F-box and WD repeat domain containing 4 [Source:HGNC Symbol;Acc:HGNC:10847]
81. FER1L6 ENSGALG00000033783 196 0.808 - - - - - 0.808 - - - - fer-1 like family member 6 [Source:HGNC Symbol;Acc:HGNC:28065]
82. DNAH17 1389 0.808 - - 0.808 - - - - - - - dynein axonemal heavy chain 17, transcript variant X6
83. FKBP6 ENSGALG00000029211 220 0.807 - - 0.807 - - - - - - - FK506 binding protein 6 [Source:HGNC Symbol;Acc:HGNC:3722]
84. MMACHC ENSGALG00000010234 77 0.807 - - - - - - - - - 0.807 methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria [Source:NCBI gene;Acc:424597]
85. ARHGEF10 ENSGALG00000016350 151 0.805 - - 0.805 - - - - - - - Rho guanine nucleotide exchange factor 10 [Source:HGNC Symbol;Acc:HGNC:14103]
86. KLHDC3 ENSGALG00000008536 1961 0.804 - - 0.804 - - - - - - - kelch domain containing 3 [Source:HGNC Symbol;Acc:HGNC:20704]
87. USP44 ENSGALG00000011400 254 0.803 - - 0.803 - - - - - - - ubiquitin specific peptidase 44 [Source:HGNC Symbol;Acc:HGNC:20064]
88. GPR89 GPR89 2253 0.803 - - 0.803 - - - - - - -
89. ENSGALG00000007050 ENSGALG00000007050 28 0.801 - - 0.801 - - - - - - -
90. SLC17A8 ENSGALG00000041122 57 0.801 - - 0.801 - - - - - - - Gallus gallus solute carrier family 17 member 8 (SLC17A8), mRNA. [Source:RefSeq mRNA;Acc:NM_001319029]
91. C1orf131 C1orf131 141 0.798 - - - - - - - 0.798 - -
92. SLC4A1AP ENSGALG00000010047 3171 0.795 - - 0.795 - - - - - - - solute carrier family 4 member 1 adaptor protein [Source:HGNC Symbol;Acc:HGNC:13813]
93. MTMR9 ENSGALG00000016649 2055 0.795 - - 0.795 - - - - - - - myotubularin related protein 9 [Source:NCBI gene;Acc:422033]
94. ENSGALG00000028413 ENSGALG00000028413 551 0.794 - - - - - - 0.794 - - -
95. DNAJC13 ENSGALG00000035068 180 0.792 - - 0.792 - - - - - - - DnaJ heat shock protein family (Hsp40) member C13 [Source:HGNC Symbol;Acc:HGNC:30343]
96. ROBO1 ENSGALG00000015511 213 0.792 - - 0.792 - - - - - - - roundabout guidance receptor 1 [Source:HGNC Symbol;Acc:HGNC:10249]
97. CTSS ENSGALG00000000775 591 0.79 - - 0.790 - - - - - - - cathepsin S [Source:NCBI gene;Acc:425657]
98. NRG1 ENSGALG00000015422 196 0.79 - - 0.790 - - - - - - - neuregulin 1 [Source:NCBI gene;Acc:373906]
99. JADE3 ENSGALG00000016727 55 0.789 - - 0.789 - - - - - - - jade family PHD finger 3 [Source:HGNC Symbol;Acc:HGNC:22982]
100. KCNJ15 ENSGALG00000016055 66 0.788 - - 0.788 - - - - - - - potassium voltage-gated channel subfamily J member 15 [Source:HGNC Symbol;Acc:HGNC:6261]

There are 217 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA