Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for RNF20

Gene Name Gene ID Reads Annotation
RNF20 ENSGALG00000015548 7199 ring finger protein 20 [Source:NCBI gene;Acc:427310]











Genes with expression patterns similar to RNF20

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RNF20 ENSGALG00000015548 7199 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ring finger protein 20 [Source:NCBI gene;Acc:427310]
2. RBM25 ENSGALG00000009332 10842 2.252 0.710 - 0.833 - - - - - - 0.709 RNA binding motif protein 25 [Source:NCBI gene;Acc:423250]
3. TUBA4A ENSGALG00000000433 1367 1.697 - - 0.820 - - - 0.877 - - - tubulin alpha 4a
4. MBNL1 ENSGALG00000029190 3953 1.676 - - 0.818 - - - 0.858 - - - muscleblind like splicing regulator 1 [Source:NCBI gene;Acc:425033]
5. RAB1A ENSGALG00000031582 6929 1.664 0.729 - - - - - 0.935 - - - RAB1A, member RAS oncogene family [Source:NCBI gene;Acc:421273]
6. SRP72 ENSGALG00000011403 13666 1.661 - - 0.754 - - - 0.907 - - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
7. PARD3B ENSGALG00000042645 2893 1.656 - - 0.780 - - - 0.876 - - - par-3 family cell polarity regulator beta [Source:HGNC Symbol;Acc:HGNC:14446]
8. TOP2A ENSGALG00000003922 7726 1.648 0.732 - 0.916 - - - - - - - topoisomerase (DNA) II alpha [Source:NCBI gene;Acc:395570]
9. URM1 ENSGALG00000004971 17880 1.621 - - 0.822 - - - 0.799 - - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
10. RAB3IP ENSGALG00000009959 1652 1.618 - - 0.813 - - - 0.805 - - - RAB3A interacting protein, transcript variant X1
11. SELM SELM 6366 1.617 - - 0.763 - - - 0.854 - - -
12. SQLE ENSGALG00000036915 4172 1.616 - - 0.774 - - - 0.842 - - - squalene epoxidase [Source:NCBI gene;Acc:420335]
13. TNFAIP8 ENSGALG00000027761 2383 1.602 - - - - - - 0.888 0.714 - - TNF alpha induced protein 8 [Source:NCBI gene;Acc:427384]
14. CSTF3 ENSGALG00000011685 4711 1.594 - - 0.732 - - - 0.862 - - - cleavage stimulation factor subunit 3 [Source:NCBI gene;Acc:421595]
15. SHMT1 ENSGALG00000005046 1430 1.59 - - 0.832 - - - - 0.758 - - serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]
16. MTDH ENSGALG00000034050 9525 1.58 0.726 - - - - - 0.854 - - - metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
17. SNX14 ENSGALG00000015831 2554 1.539 - - 0.813 - - - 0.726 - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
18. NAP1L1 ENSGALG00000010238 14506 1.533 0.784 - - - - - 0.749 - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
19. SEC22B ENSGALG00000039704 16080 1.531 - - 0.798 - - - 0.733 - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
20. PRPF40A ENSGALG00000012526 7724 1.528 - - 0.817 - - - 0.711 - - - pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
21. SURF6 ENSGALG00000038413 11178 1.503 0.710 - 0.793 - - - - - - - surfeit 6 [Source:NCBI gene;Acc:417160]
22. PMPCB ENSGALG00000008280 6357 1.488 - - 0.711 - - - 0.777 - - - peptidase, mitochondrial processing beta subunit [Source:NCBI gene;Acc:417718]
23. KRIT1 ENSGALG00000042651 4486 1.486 - - 0.726 - - - 0.760 - - - KRIT1, ankyrin repeat containing [Source:NCBI gene;Acc:420549]
24. TMEM132C ENSGALG00000002714 2644 1.473 0.705 - 0.768 - - - - - - - transmembrane protein 132C, transcript variant X1
25. PHF14 ENSGALG00000038041 13687 1.469 - - 0.748 - - - - 0.721 - - PHD finger protein 14 [Source:NCBI gene;Acc:420583]
26. HISTH1 ENSGALG00000011747 16825 1.454 0.701 - - - - - 0.753 - - - histone H1
27. TPR ENSGALG00000005105 2924 0.964 - - - - - - 0.964 - - - translocated promoter region, nuclear basket protein [Source:HGNC Symbol;Acc:HGNC:12017]
28. NT5C2 ENSGALG00000008179 1760 0.95 - - - - - - 0.950 - - - 5'-nucleotidase, cytosolic II [Source:NCBI gene;Acc:423871]
29. FAM183A 242 0.94 - - - - - - 0.940 - - - family with sequence similarity 183 member A, transcript variant 2
30. DNAJC12 ENSGALG00000002769 1418 0.939 - - - - - - 0.939 - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
31. ZFYVE19 ENSGALG00000008460 2750 0.938 - - - - - - 0.938 - - - zinc finger FYVE-type containing 19 [Source:NCBI gene;Acc:423204]
32. USP54 ENSGALG00000005232 2749 0.937 - - - - - - 0.937 - - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
33. XPO7 ENSGALG00000001838 1875 0.934 - - - - - - 0.934 - - - exportin 7 [Source:NCBI gene;Acc:426925]
34. CEP290 ENSGALG00000011177 1559 0.934 - - - - - - 0.934 - - - centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
35. FAM57A ENSGALG00000004820 1492 0.933 - - - - - - 0.933 - - - family with sequence similarity 57 member A [Source:HGNC Symbol;Acc:HGNC:29646]
36. UPK3BL ENSGALG00000001885 1650 0.932 - - - - - - 0.932 - - - uroplakin 3B-like
37. CCNL1 ENSGALG00000009699 1033 0.93 - - - - - - 0.930 - - - cyclin L1 [Source:HGNC Symbol;Acc:HGNC:20569]
38. COPS8 ENSGALG00000033385 10166 0.93 - - - - - - 0.930 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
39. NSRP1 ENSGALG00000004186 1683 0.93 - - - - - - 0.930 - - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
40. ENSGALG00000013233 ENSGALG00000013233 3265 0.93 - - - - - - 0.930 - - -
41. HESX1 ENSGALG00000005506 203 0.93 - - - - - - 0.930 - - - HESX homeobox 1 [Source:NCBI gene;Acc:395864]
42. ERMP1 ENSGALG00000000438 1136 0.929 - - - - - - 0.929 - - - endoplasmic reticulum metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:23703]
43. NUP205 ENSGALG00000011662 4157 0.929 - - - - - - 0.929 - - - nucleoporin 205
44. CCNE2 ENSGALG00000040794 1229 0.927 - - - - - - 0.927 - - - cyclin E2 [Source:NCBI gene;Acc:420231]
45. DCLK2 ENSGALG00000032386 2253 0.926 - - - - - - 0.926 - - - doublecortin like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19002]
46. ENTPD8L ENSGALG00000008936 731 0.925 - - - - - - 0.925 - - - ectonucleoside triphosphate diphosphohydrolase 8-like
47. TM2D3 ENSGALG00000026271 2566 0.924 - - - - - - 0.924 - - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
48. DNAJC16 ENSGALG00000032832 750 0.924 - - - - - - 0.924 - - - DnaJ heat shock protein family (Hsp40) member C16 [Source:NCBI gene;Acc:429208]
49. SNORA31 SNORA31 183 0.922 - - - - - - 0.922 - - -
50. ENSGALG00000016099 ENSGALG00000016099 138 0.922 - - - - - - 0.922 - - -
51. MXRA5 ENSGALG00000016635 352 0.921 - - - - - - 0.921 - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
52. SPG11 ENSGALG00000008180 1890 0.919 - - - - - - 0.919 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
53. LFNG ENSGALG00000038515 5178 0.919 - - - - - - 0.919 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
54. PLCE1 ENSGALG00000039528 151 0.918 - - - - - - 0.918 - - - phospholipase C epsilon 1
55. SCUBE1 ENSGALG00000014178 91 0.918 - - - - - - 0.918 - - - signal peptide, CUB domain and EGF like domain containing 1, transcript variant X4
56. MESDC1 1013 0.918 - - - - - - 0.918 - - - mesoderm development candidate 1
57. PTN ENSGALG00000040493 864 0.918 - - - - - - 0.918 - - - pleiotrophin [Source:NCBI gene;Acc:418125]
58. ENSGALG00000026925 ENSGALG00000026925 119 0.918 - - - - - - 0.918 - - -
59. WDSUB1 ENSGALG00000012574 2038 0.918 - - - - - - 0.918 - - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
60. TCTE1 ENSGALG00000010165 65 0.918 - - - - - - 0.918 - - - t-complex-associated-testis-expressed 1 [Source:HGNC Symbol;Acc:HGNC:11693]
61. MST1 ENSGALG00000002722 994 0.916 - - - - - - 0.916 - - - macrophage stimulating 1 (hepatocyte growth factor-like) [Source:NCBI gene;Acc:396135]
62. C14orf80 C14orf80 1921 0.916 - - - - - - 0.916 - - -
63. METTL24 ENSGALG00000041120 60 0.916 - - - - - - 0.916 - - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
64. GRB14 ENSGALG00000020703 42 0.916 - - - - - - 0.916 - - - growth factor receptor bound protein 14 [Source:HGNC Symbol;Acc:HGNC:4565]
65. HEMK1 ENSGALG00000002253 40 0.916 - - - - - - 0.916 - - - HemK methyltransferase family member 1 [Source:HGNC Symbol;Acc:HGNC:24923]
66. PIK3R3 ENSGALG00000010335 374 0.914 - - - - - - 0.914 - - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
67. SDK2 ENSGALG00000031895 2682 0.914 - - - - - - 0.914 - - - sidekick cell adhesion molecule 2 [Source:NCBI gene;Acc:395215]
68. MBTPS1 ENSGALG00000003293 4843 0.914 - - - - - - 0.914 - - - membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
69. SUGP1 ENSGALG00000042132 2771 0.913 - - - - - - 0.913 - - - SURP and G-patch domain containing 1 [Source:NCBI gene;Acc:428349]
70. PGAP2 ENSGALG00000027762 2583 0.912 - - - - - - 0.912 - - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
71. MBNL2 ENSGALG00000016890 3162 0.912 - - - - - - 0.912 - - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
72. ENSGALG00000003619 ENSGALG00000003619 58 0.912 - - - - - - 0.912 - - -
73. GAS6 ENSGALG00000016820 481 0.911 - - - - - - 0.911 - - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
74. ENSGALG00000028164 ENSGALG00000028164 3325 0.91 - - - - - - 0.910 - - -
75. NCAPG2 ENSGALG00000006525 2319 0.909 - - - - - - 0.909 - - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
76. BPHL ENSGALG00000029659 501 0.909 - - - - - - 0.909 - - - biphenyl hydrolase like [Source:HGNC Symbol;Acc:HGNC:1094]
77. FAM193A ENSGALG00000015667 3075 0.909 - - - - - - 0.909 - - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
78. MPST ENSGALG00000040840 2122 0.908 - - - - - - 0.908 - - - mercaptopyruvate sulfurtransferase [Source:NCBI gene;Acc:418048]
79. UBE3B ENSGALG00000013851 1672 0.907 - - - - - - 0.907 - - - ubiquitin protein ligase E3B [Source:NCBI gene;Acc:776286]
80. PKN3 532 0.906 - - - - - - 0.906 - - - protein kinase N3, transcript variant X2
81. ALDH18A1 ENSGALG00000034655 3038 0.905 - - - - - - 0.905 - - - aldehyde dehydrogenase 18 family member A1, transcript variant X13
82. TM9SF4 ENSGALG00000006568 567 0.905 - - - - - - 0.905 - - - transmembrane 9 superfamily member 4 [Source:HGNC Symbol;Acc:HGNC:30797]
83. ENSGALG00000002852 ENSGALG00000002852 2687 0.904 - - - - - - 0.904 - - -
84. SCAF4 ENSGALG00000033965 2027 0.904 - - - - - - 0.904 - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
85. MBSP MBSP 5634 0.902 - - 0.902 - - - - - - -
86. WIPI1 ENSGALG00000004215 3359 0.9 - - - - - - 0.900 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
87. DIEXF ENSGALG00000009887 4782 0.9 - - - - - - 0.900 - - - digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
88. TMEM135 2283 0.899 - - - - - - 0.899 - - - transmembrane protein 135, transcript variant X4
89. NIN ENSGALG00000012361 2284 0.899 - - - - - - 0.899 - - - ninein [Source:HGNC Symbol;Acc:HGNC:14906]
90. THOC2 ENSGALG00000008507 9501 0.898 - - 0.898 - - - - - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
91. SLK ENSGALG00000008318 2220 0.896 - - 0.896 - - - - - - - STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
92. CDCA7L ENSGALG00000035978 2112 0.896 - - 0.896 - - - - - - - cell division cycle associated 7 like [Source:NCBI gene;Acc:420608]
93. SPAG9 ENSGALG00000034001 2314 0.896 - - - - - - 0.896 - - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
94. ATF7IP ENSGALG00000011814 1571 0.896 - - 0.896 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
95. SGSM3 ENSGALG00000012033 1839 0.895 - - - - - - 0.895 - - - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
96. B4GALT3 ENSGALG00000022891 2825 0.894 - - - - - - 0.894 - - - beta-1,4-galactosyltransferase 3
97. MSL3 ENSGALG00000041433 2957 0.892 - - - - - - 0.892 - - - MSL complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:7370]
98. LBR 6686 0.891 - - 0.891 - - - - - - - lamin B receptor, transcript variant X4
99. ATM ENSGALG00000017159 893 0.891 - - - - - - 0.891 - - - ATM serine/threonine kinase [Source:NCBI gene;Acc:395401]
100. SLC25A21 ENSGALG00000010117 536 0.889 - - - - - - 0.889 - - - solute carrier family 25 member 21 [Source:HGNC Symbol;Acc:HGNC:14411]

There are 596 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA