Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RNF180

Gene Name Gene ID Reads Annotation
RNF180 ENSGALG00000014743 3 ring finger protein 180 [Source:HGNC Symbol;Acc:HGNC:27752]











Genes with expression patterns similar to RNF180

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RNF180 ENSGALG00000014743 3 3 - - 1.000 1.000 - - - - - 1.000 ring finger protein 180 [Source:HGNC Symbol;Acc:HGNC:27752]
2. FAM71D ENSGALG00000043908 2 1.752 - - 1.000 - - - - - - 0.752 family with sequence similarity 71, member D
3. ENSGALG00000004635 ENSGALG00000004635 2 1.476 - - 0.724 - - - - - - 0.752
4. ENSGALG00000016269 ENSGALG00000016269 3 1 - - - 1.000 - - - - - -
5. ENSGALG00000026222 ENSGALG00000026222 3 1 - - 1.000 - - - - - - -
6. CSMD1 ENSGALG00000035230 12 1 - - 1.000 - - - - - - - CUB and Sushi multiple domains 1 [Source:HGNC Symbol;Acc:HGNC:14026]
7. SLC6A6 ENSGALG00000006425 31 1 - - - 1.000 - - - - - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
8. ENSGALG00000011567 ENSGALG00000011567 2 1 - - 1.000 - - - - - - -
9. ENSGALG00000026418 ENSGALG00000026418 2 1 - - 1.000 - - - - - - -
10. GAS2L1 ENSGALG00000036731 2 1 - - 1.000 - - - - - - - growth arrest specific 2 like 1 [Source:HGNC Symbol;Acc:HGNC:16955]
11. DES ENSGALG00000011306 16 1 - - - 1.000 - - - - - - desmin [Source:HGNC Symbol;Acc:HGNC:2770]
12. FRMPD3 ENSGALG00000028975 3 1 - - 1.000 - - - - - - - FERM and PDZ domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29382]
13. GDNF ENSGALG00000003716 7 1 - - 1.000 - - - - - - - glial cell derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:4232]
14. FLT4 ENSGALG00000005802 5 1 - - - 1.000 - - - - - - fms related tyrosine kinase 4 [Source:NCBI gene;Acc:395742]
15. KCNK10 ENSGALG00000010598 7 1 - - 1.000 - - - - - - - potassium two pore domain channel subfamily K member 10 [Source:HGNC Symbol;Acc:HGNC:6273]
16. CROCC 5 1 - - 1.000 - - - - - - - ciliary rootlet coiled-coil, rootletin, transcript variant X6
17. ABCG5 ENSGALG00000009955 4 1 - - 1.000 - - - - - - - ATP binding cassette subfamily G member 5 [Source:HGNC Symbol;Acc:HGNC:13886]
18. NHSL1 ENSGALG00000026981 11 1 - - - 1.000 - - - - - - NHS like 1 [Source:HGNC Symbol;Acc:HGNC:21021]
19. DNAH14 ENSGALG00000045078 1 1 - - 1.000 - - - - - - - dynein, axonemal, heavy chain 14
20. ABHD3 ENSGALG00000014938 9 1 - - - 1.000 - - - - - - abhydrolase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:18718]
21. KCNRG ENSGALG00000017012 4 1 - - - 1.000 - - - - - - potassium channel regulator [Source:HGNC Symbol;Acc:HGNC:18893]
22. ENSGALG00000004223 ENSGALG00000004223 7 1 - - 1.000 - - - - - - -
23. SLC5A12 ENSGALG00000013304 1 1 - - 1.000 - - - - - - - solute carrier family 5 member 12 [Source:HGNC Symbol;Acc:HGNC:28750]
24. SOX2 ENSGALG00000043460 6 1 - - - 1.000 - - - - - - SRY-box 2 [Source:NCBI gene;Acc:396105]
25. SLC14A2 SLC14A2 4 1 - - 1.000 - - - - - - -
26. ENTPD2 ENSGALG00000039696 3 1 - - 1.000 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 2 [Source:NCBI gene;Acc:395797]
27. ENSGALG00000026840 ENSGALG00000026840 1 1 - - 1.000 - - - - - - -
28. GPR132 ENSGALG00000027407 9 1 - - 1.000 - - - - - - - G protein-coupled receptor 132, transcript variant X2
29. K123 ENSGALG00000041978 16 1 - - 1.000 - - - - - - - K123 protein [Source:NCBI gene;Acc:395873]
30. CHST9 ENSGALG00000019489 21 1 - - 1.000 - - - - - - - carbohydrate sulfotransferase 9 [Source:HGNC Symbol;Acc:HGNC:19898]
31. AQP8 10 1 - - 1.000 - - - - - - - aquaporin 8
32. CALCR ENSGALG00000009509 7 1 - - 1.000 - - - - - - - calcitonin receptor [Source:HGNC Symbol;Acc:HGNC:1440]
33. SHROOM4 ENSGALG00000033953 3 1 - - 1.000 - - - - - - - shroom family member 4 [Source:HGNC Symbol;Acc:HGNC:29215]
34. MFSD11 ENSGALG00000001777 8 1 - - 1.000 - - - - - - - major facilitator superfamily domain containing 11 [Source:HGNC Symbol;Acc:HGNC:25458]
35. ENSGALG00000005482 ENSGALG00000005482 1 1 - - - 1.000 - - - - - -
36. GJD4 ENSGALG00000007065 1 1 - - 1.000 - - - - - - - gap junction protein delta 4 [Source:HGNC Symbol;Acc:HGNC:23296]
37. ENSGALG00000014037 ENSGALG00000014037 3 1 - - 1.000 - - - - - - -
38. TRPM6 3 1 - - 1.000 - - - - - - - transient receptor potential cation channel subfamily M member 6, transcript variant X3
39. gga-let-7i ENSGALG00000018237 2 1 - - - 1.000 - - - - - - gga-let-7i [Source:miRBase;Acc:MI0001168]
40. PP2D1 ENSGALG00000044362 2 1 - - - 1.000 - - - - - - protein phosphatase 2C like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28406]
41. CALB1 ENSGALG00000032282 16 1 - - - 1.000 - - - - - - calbindin 1 [Source:NCBI gene;Acc:396519]
42. DEPTOR ENSGALG00000005790 6 1 - - 1.000 - - - - - - - DEP domain containing MTOR-interacting protein
43. CMTM4 ENSGALG00000005251 5 1 - - 1.000 - - - - - - - CKLF like MARVEL transmembrane domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19175]
44. DLK1 ENSGALG00000011244 5 1 - - 1.000 - - - - - - - delta like non-canonical Notch ligand 1 [Source:NCBI gene;Acc:423459]
45. CMYA5 16 1 - - - 1.000 - - - - - - cardiomyopathy associated 5
46. GPRC6A ENSGALG00000014925 21 1 - - 1.000 - - - - - - - G protein-coupled receptor class C group 6 member A [Source:HGNC Symbol;Acc:HGNC:18510]
47. IMPG1 ENSGALG00000015897 4 1 - - 1.000 - - - - - - - interphotoreceptor matrix proteoglycan 1 [Source:NCBI gene;Acc:374088]
48. KIAA1522 ENSGALG00000003539 1 1 - - 1.000 - - - - - - - KIAA1522 [Source:HGNC Symbol;Acc:HGNC:29301]
49. ENSGALG00000028322 ENSGALG00000028322 19 1 - - 1.000 - - - - - - -
50. ISPD ENSGALG00000010795 7 1 - - 1.000 - - - - - - - isoprenoid synthase domain containing [Source:HGNC Symbol;Acc:HGNC:37276]
51. GPR156 ENSGALG00000014973 4 1 - - - 1.000 - - - - - - G protein-coupled receptor 156, transcript variant X4
52. ENSGALG00000025985 ENSGALG00000025985 1 1 - - - 1.000 - - - - - -
53. LIN7A ENSGALG00000010939 8 1 - - 1.000 - - - - - - - lin-7 homolog A, crumbs cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:17787]
54. A2ML2 ENSGALG00000014252 3 1 - - 1.000 - - - - - - - alpha-2-macroglobulin-like 2, transcript variant X6
55. HPSE2 ENSGALG00000007508 1 1 - - 1.000 - - - - - - - heparanase 2 (inactive), transcript variant X4
56. PSKH1 5 1 - - 1.000 - - - - - - - protein serine kinase H1, transcript variant X1
57. MSGN1 ENSGALG00000016469 17 1 - - 1.000 - - - - - - - mesogenin 1 [Source:NCBI gene;Acc:395419]
58. FGA ENSGALG00000009266 291 1 - - 1.000 - - - - - - - fibrinogen alpha chain [Source:NCBI gene;Acc:396307]
59. BTN1A1 ENSGALG00000000589 20 1 - - 1.000 - - - - - - - butyrophilin subfamily 1 member A1 [Source:NCBI gene;Acc:420061]
60. PRG4 3 1 - - - 1.000 - - - - - - proteoglycan 4
61. HOXA11 ENSGALG00000040021 3 1 - - - 1.000 - - - - - - homeobox A11 [Source:NCBI gene;Acc:395327]
62. TRIM66 ENSGALG00000005958 5 1 - - 1.000 - - - - - - - tripartite motif containing 66 [Source:HGNC Symbol;Acc:HGNC:29005]
63. HELB ENSGALG00000009885 8 1 - - - 1.000 - - - - - - DNA helicase B [Source:HGNC Symbol;Acc:HGNC:17196]
64. 5S_2 5S_2 58 1 - - 1.000 - - - - - - -
65. FSD2 ENSGALG00000005996 2 1 - - 1.000 - - - - - - - fibronectin type III and SPRY domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18024]
66. ACD ENSGALG00000044706 6 1 - - 1.000 - - - - - - - ACD, shelterin complex subunit and telomerase recruitment factor, transcript variant X4
67. AHRR ENSGALG00000013402 2 0.935 - - 0.935 - - - - - - - aryl-hydrocarbon receptor repressor [Source:NCBI gene;Acc:420989]
68. CRYBA4 ENSGALG00000005634 56 0.933 - - - - - - - - - 0.933 crystallin beta A4 [Source:NCBI gene;Acc:373998]
69. CNGB3 ENSGALG00000037644 1 0.929 - - - 0.929 - - - - - - cyclic nucleotide gated channel beta 3 [Source:HGNC Symbol;Acc:HGNC:2153]
70. SNORA50 SNORA50 9 0.924 - - 0.924 - - - - - - -
71. DYTN ENSGALG00000008562 2 0.917 - - 0.917 - - - - - - - dystrotelin [Source:HGNC Symbol;Acc:HGNC:23279]
72. ARHGAP28 ENSGALG00000014758 34 0.909 - - - - - - - - - 0.909 Rho GTPase activating protein 28 [Source:HGNC Symbol;Acc:HGNC:25509]
73. ENSGALG00000010222 ENSGALG00000010222 4 0.897 - - 0.897 - - - - - - -
74. B3GNT7 ENSGALG00000007701 929 0.894 - - - 0.894 - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
75. MYBPC3 ENSGALG00000008148 315 0.867 - - 0.867 - - - - - - - myosin binding protein C, cardiac [Source:NCBI gene;Acc:396013]
76. RNF6 ENSGALG00000017105 11 0.862 - - - 0.862 - - - - - - ring finger protein 6 [Source:HGNC Symbol;Acc:HGNC:10069]
77. ENSGALG00000009485 ENSGALG00000009485 4 0.857 - - - 0.857 - - - - - -
78. GHRH ENSGALG00000003842 30 0.856 - - 0.856 - - - - - - - growth hormone releasing hormone [Source:NCBI gene;Acc:419178]
79. ENSGALG00000023265 ENSGALG00000023265 4 0.854 - - - 0.854 - - - - - -
80. KIAA2013 ENSGALG00000004533 8 0.854 - - - 0.854 - - - - - - KIAA2013 [Source:HGNC Symbol;Acc:HGNC:28513]
81. CACNA2D4 4 0.846 - - - 0.846 - - - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 4
82. EBF1 ENSGALG00000003699 23 0.834 - - - 0.834 - - - - - - early B-cell factor 1 [Source:NCBI gene;Acc:395512]
83. PIKFYVE ENSGALG00000008842 3 0.823 - - 0.823 - - - - - - - phosphoinositide kinase, FYVE-type zinc finger containing [Source:HGNC Symbol;Acc:HGNC:23785]
84. MST1R ENSGALG00000003103 11 0.818 - - 0.818 - - - - - - - macrophage stimulating 1 receptor [Source:NCBI gene;Acc:427573]
85. PCDH19 ENSGALG00000006822 13 0.815 - - - 0.815 - - - - - - protocadherin 19 [Source:NCBI gene;Acc:422263]
86. U4 U4 69 0.802 - - - 0.802 - - - - - -
87. ENSGALG00000017301 ENSGALG00000017301 29 0.801 - - - 0.801 - - - - - -
88. CILP ENSGALG00000007358 20 0.792 - - 0.792 - - - - - - - cartilage intermediate layer protein [Source:HGNC Symbol;Acc:HGNC:1980]
89. ALPI ENSGALG00000023866 19 0.792 - - 0.792 - - - - - - - alkaline phosphatase, intestinal, transcript variant X2
90. VWA3B ENSGALG00000040709 5 0.792 - - 0.792 - - - - - - - von Willebrand factor A domain containing 3B [Source:HGNC Symbol;Acc:HGNC:28385]
91. TROJANZ ENSGALG00000027747 37 0.792 - - 0.792 - - - - - - - Gallus gallus phosphotyrosine phosphatase kappa-like-Z (TROJANZ), mRNA. [Source:RefSeq mRNA;Acc:NM_001318459]
92. EGF ENSGALG00000012155 8 0.789 - - - 0.789 - - - - - - epidermal growth factor [Source:NCBI gene;Acc:408035]
93. ENSGALG00000004692 ENSGALG00000004692 59 0.789 - - - 0.789 - - - - - -
94. GRAMD1B ENSGALG00000006494 5 0.789 - - 0.789 - - - - - - - GRAM domain containing 1B [Source:HGNC Symbol;Acc:HGNC:29214]
95. PTPN23 ENSGALG00000038522 93 0.789 - - - 0.789 - - - - - - protein tyrosine phosphatase, non-receptor type 23 [Source:HGNC Symbol;Acc:HGNC:14406]
96. ABRA ENSGALG00000041043 16 0.786 - - - 0.786 - - - - - - actin binding Rho activating protein [Source:HGNC Symbol;Acc:HGNC:30655]
97. DDC ENSGALG00000013094 230 0.777 - - - - - - - - - 0.777 dopa decarboxylase [Source:HGNC Symbol;Acc:HGNC:2719]
98. COL4A3 ENSGALG00000038612 41 0.77 - - - 0.770 - - - - - - collagen type IV alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2204]
99. FAM43B ENSGALG00000026367 2 0.761 - - 0.761 - - - - - - - family with sequence similarity 43 member B [Source:HGNC Symbol;Acc:HGNC:31791]
100. MMEL1 ENSGALG00000001115 46 0.76 - - - 0.760 - - - - - - membrane metalloendopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:14668]

There are 44 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA