Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RNF168

Gene Name Gene ID Reads Annotation
RNF168 ENSGALG00000006392 507 ring finger protein 168 [Source:HGNC Symbol;Acc:HGNC:26661]











Genes with expression patterns similar to RNF168

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RNF168 ENSGALG00000006392 507 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 ring finger protein 168 [Source:HGNC Symbol;Acc:HGNC:26661]
2. PIGL ENSGALG00000004492 669 1 - - - - - - - 1.000 - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
3. ENSGALG00000012250 ENSGALG00000012250 581 1 - - - - - - - 1.000 - -
4. ATP2B4 ENSGALG00000003601 3746 1 - - - - - - - 1.000 - - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
5. SNIP1 ENSGALG00000002010 1429 1 - - - - - - - 1.000 - - Smad nuclear interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:30587]
6. PDCD6IP ENSGALG00000033500 580 1 - - - - - - - 1.000 - - programmed cell death 6 interacting protein [Source:NCBI gene;Acc:420725]
7. ELAVL4 ENSGALG00000010533 4978 1 - - - - - - - 1.000 - - ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
8. SPDYA ENSGALG00000017392 503 1 - - - - - - - 1.000 - - speedy/RINGO cell cycle regulator family member A [Source:HGNC Symbol;Acc:HGNC:30613]
9. ZNF319 ENSGALG00000000999 1272 1 - - - - - - - 1.000 - - zinc finger protein 319 [Source:HGNC Symbol;Acc:HGNC:13644]
10. FBF1 ENSGALG00000002179 1738 1 - - - - - - - 1.000 - - Fas binding factor 1 [Source:NCBI gene;Acc:770159]
11. ALS2 ENSGALG00000008415 2576 0.999 - - - - - - - 0.999 - - ALS2, alsin Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:443]
12. CRELD2 ENSGALG00000008551 2084 0.999 - - - - - - - 0.999 - - cysteine rich with EGF like domains 2 [Source:NCBI gene;Acc:417735]
13. SLC35D1 ENSGALG00000011121 4456 0.999 - - - - - - - 0.999 - - solute carrier family 35 member D1 [Source:HGNC Symbol;Acc:HGNC:20800]
14. RFT1 ENSGALG00000001945 2446 0.999 - - - - - - - 0.999 - - RFT1 homolog [Source:NCBI gene;Acc:770487]
15. RNFT1 ENSGALG00000005205 2888 0.998 - - - - - - - 0.998 - - ring finger protein, transmembrane 1 [Source:HGNC Symbol;Acc:HGNC:30206]
16. RAI2 ENSGALG00000016538 1074 0.998 - - - - - - - 0.998 - - retinoic acid induced 2 [Source:HGNC Symbol;Acc:HGNC:9835]
17. NVL ENSGALG00000009322 5286 0.997 - - - - - - - 0.997 - - nuclear VCP-like [Source:NCBI gene;Acc:421326]
18. TMEM192 ENSGALG00000009528 2428 0.997 - - - - - - - 0.997 - - transmembrane protein 192 [Source:HGNC Symbol;Acc:HGNC:26775]
19. PMP22 ENSGALG00000031425 5358 0.997 - - - - - - - 0.997 - - peripheral myelin protein 22 [Source:NCBI gene;Acc:417327]
20. C6ORF192 C6ORF192 4224 0.996 - - - - - - - 0.996 - -
21. CENPL ENSGALG00000038411 4867 0.996 - - - - - - - 0.996 - - centromere protein L [Source:NCBI gene;Acc:426563]
22. MAP2K2 ENSGALG00000001267 3857 0.995 - - - - - - - 0.995 - - mitogen-activated protein kinase kinase 2 [Source:NCBI gene;Acc:396349]
23. ATE1 ENSGALG00000009502 3751 0.995 - - - - - - - 0.995 - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
24. NBL1 ENSGALG00000040297 8165 0.994 - - - - - - - 0.994 - - neuroblastoma 1, DAN family BMP antagonist [Source:NCBI gene;Acc:373952]
25. IFNAR2 ENSGALG00000041867 1596 0.994 - - - - - - - 0.994 - - interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
26. TMEM126A ENSGALG00000014066 6149 0.994 - - - - - - - 0.994 - - transmembrane protein 126A [Source:HGNC Symbol;Acc:HGNC:25382]
27. FUNDC2 ENSGALG00000029585 9334 0.993 - - - - - - - 0.993 - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
28. RCOR3 ENSGALG00000009871 7022 0.992 - - - - - - - 0.992 - - REST corepressor 3 [Source:NCBI gene;Acc:421380]
29. CETN1 ENSGALG00000026741 7243 0.992 - - - - - - - 0.992 - - centrin 1 [Source:NCBI gene;Acc:422668]
30. TTL ENSGALG00000008614 3991 0.992 - - - - - - - 0.992 - - tubulin tyrosine ligase [Source:NCBI gene;Acc:416711]
31. DLC1 ENSGALG00000013715 5297 0.991 - - - - - - - 0.991 - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
32. YAF2 ENSGALG00000009540 8452 0.991 - - - - - - - 0.991 - - YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
33. PPP3R1 ENSGALG00000023648 3417 0.991 - - - - - - - 0.991 - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
34. CRNKL1 ENSGALG00000008429 7280 0.99 - - - - - - - 0.990 - - crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
35. CDCA7 ENSGALG00000040833 7484 0.99 - - - - - - - 0.990 - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
36. G3BP2 ENSGALG00000010882 21129 0.986 - - - - - - - 0.986 - - G3BP stress granule assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:30291]
37. PPM1D ENSGALG00000035610 6530 0.986 - - - - - - - 0.986 - - protein phosphatase, Mg2+/Mn2+ dependent 1D [Source:HGNC Symbol;Acc:HGNC:9277]
38. RBM7 ENSGALG00000007017 8779 0.985 - - - - - - - 0.985 - - RNA binding motif protein 7 [Source:NCBI gene;Acc:419760]
39. PDHB ENSGALG00000029576 12254 0.982 - - - - - - - 0.982 - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
40. gga-mir-6587 ENSGALG00000026386 9441 0.981 - - - - - - - 0.981 - - gga-mir-6587 [Source:miRBase;Acc:MI0022407]
41. EXO1 ENSGALG00000010748 7572 0.979 - - - - - - - 0.979 - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
42. JSC JSC 7982 0.975 - - - - - - - 0.975 - -
43. RFC3 ENSGALG00000017064 7011 0.971 - - - - - - - 0.971 - - replication factor C subunit 3 [Source:NCBI gene;Acc:418907]
44. KIAA0196 KIAA0196 4011 0.971 - - - - - - - 0.971 - -
45. XPO5 ENSGALG00000010341 24765 0.969 - - - - - - - 0.969 - - exportin 5 [Source:NCBI gene;Acc:421450]
46. NUP107 ENSGALG00000009934 2097 0.965 - - - - - - - 0.965 - - nucleoporin 107 [Source:NCBI gene;Acc:101751988]
47. INPP5A ENSGALG00000010493 6769 0.961 - - - - - - - 0.961 - - inositol polyphosphate-5-phosphatase A [Source:HGNC Symbol;Acc:HGNC:6076]
48. COX7A2L ENSGALG00000037996 13646 0.96 - - - - - - - 0.960 - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
49. GARS ENSGALG00000005694 18264 0.96 - - - - - - - 0.960 - - glycyl-tRNA synthetase [Source:NCBI gene;Acc:428403]
50. SBNO1 ENSGALG00000003392 6731 0.959 - - - - - - - 0.959 - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
51. AP2B1 ENSGALG00000042125 13229 0.958 - - - - - - - 0.958 - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
52. ANKRD11 ENSGALG00000006222 12327 0.958 - - - - - - - 0.958 - - ankyrin repeat domain 11, transcript variant X2
53. SFT2D1 ENSGALG00000020005 10855 0.957 - - - - - - - 0.957 - - SFT2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21102]
54. TPD52 ENSGALG00000040167 9891 0.954 - - - - - - - 0.954 - - tumor protein D52 [Source:NCBI gene;Acc:770339]
55. XRCC5 ENSGALG00000011492 6802 0.941 - - - - - - - 0.941 - - X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]
56. MRPL54 ENSGALG00000027611 39450 0.929 - - - - - - - 0.929 - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
57. PRTG ENSGALG00000037336 34665 0.919 - - - - - - - 0.919 - - protogenin [Source:NCBI gene;Acc:415407]
58. Sep-02_1 Sep-02_1 19203 0.916 - - - - - - - 0.916 - -
59. PPA2 ENSGALG00000010582 22301 0.915 - - - - - - - 0.915 - - pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
60. ENSGALG00000017396 ENSGALG00000017396 9028 0.907 - - - - - - - 0.907 - -
61. CHD4 ENSGALG00000013565 25695 0.907 - - - - - - - 0.907 - - chromodomain helicase DNA binding protein 4
62. ZOV3 ZOV3 3267 0.904 - - - - - - - 0.904 - -
63. ASXL1 ENSGALG00000006612 273 0.903 - - - - - - - - - 0.903 ASXL transcriptional regulator 1 [Source:HGNC Symbol;Acc:HGNC:18318]
64. CDC42EP4 ENSGALG00000023364 9240 0.902 - - - - - - - 0.902 - - CDC42 effector protein 4 [Source:HGNC Symbol;Acc:HGNC:17147]
65. TNFAIP8L1 ENSGALG00000004266 12611 0.901 - - - - - - - 0.901 - - TNF alpha induced protein 8 like 1 [Source:NCBI gene;Acc:420162]
66. FAM98A ENSGALG00000010428 9585 0.901 - - - - - - - 0.901 - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
67. SLC25A39 ENSGALG00000042894 10654 0.899 - - - - - - - 0.899 - - solute carrier family 25 member 39 [Source:HGNC Symbol;Acc:HGNC:24279]
68. WAPAL WAPAL 625 0.886 - - - - - - - - - 0.886
69. LRPPRC ENSGALG00000009967 17091 0.874 - - - - - - - 0.874 - - leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
70. ENSGALG00000023609 ENSGALG00000023609 6933 0.869 - - - - - - - 0.869 - -
71. CHANK3 CHANK3 218 0.858 - - - - - - - - - 0.858
72. ATP6V1G1 ENSGALG00000007190 82534 0.854 - - - - - - - 0.854 - - ATPase H+ transporting V1 subunit G1 [Source:NCBI gene;Acc:417249]
73. KLHL29 ENSGALG00000016495 582 0.841 - - - - - - - - - 0.841 kelch like family member 29 [Source:HGNC Symbol;Acc:HGNC:29404]
74. TBC1D2B ENSGALG00000003322 54 0.839 - - - - - 0.839 - - - - TBC1 domain family member 2B [Source:HGNC Symbol;Acc:HGNC:29183]
75. GTF2H5 ENSGALG00000013733 12293 0.834 - - - - - - - 0.834 - - general transcription factor IIH subunit 5 [Source:NCBI gene;Acc:769754]
76. ENSGALG00000013164 ENSGALG00000013164 3 0.828 - - - - - 0.828 - - - -
77. TMTC4 ENSGALG00000016870 40 0.823 - - - - - 0.823 - - - - transmembrane and tetratricopeptide repeat containing 4 [Source:HGNC Symbol;Acc:HGNC:25904]
78. ATP10D ENSGALG00000014192 94 0.814 - - - - - - - - - 0.814 ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
79. MAPK6 ENSGALG00000031448 28384 0.81 - - - - - - - 0.810 - - mitogen-activated protein kinase 6 [Source:NCBI gene;Acc:415419]
80. GINS4 ENSGALG00000045374 870 0.809 - - - - - - - - - 0.809 Gallus gallus GINS complex subunit 4 (Sld5 homolog) (GINS4), mRNA. [Source:RefSeq mRNA;Acc:NM_001354864]
81. ISPD ENSGALG00000010795 7 0.796 - - - - - - - - - 0.796 isoprenoid synthase domain containing [Source:HGNC Symbol;Acc:HGNC:37276]
82. LRRC49 ENSGALG00000004059 29 0.794 - - - - - - - - - 0.794 leucine rich repeat containing 49 [Source:HGNC Symbol;Acc:HGNC:25965]
83. CHST8 ENSGALG00000004903 16 0.789 - - - - - - - - - 0.789 carbohydrate sulfotransferase 8 [Source:HGNC Symbol;Acc:HGNC:15993]
84. ENSGALG00000012920 ENSGALG00000012920 8 0.789 - - - - - - - - - 0.789
85. NOX3 ENSGALG00000013659 4 0.789 - - - - - - - - - 0.789 NADPH oxidase 3 [Source:HGNC Symbol;Acc:HGNC:7890]
86. NCX1 NCX1 9 0.789 - - - - - - - - - 0.789
87. C2 ENSGALG00000035721 5 0.789 - - - - - - - - - 0.789 complement C2 [Source:HGNC Symbol;Acc:HGNC:1248]
88. IFNG ENSGALG00000009903 5 0.789 - - - - - - - - - 0.789 interferon gamma [Source:NCBI gene;Acc:396054]
89. SCT ENSGALG00000034822, ENSGALG00000037020 14 0.789 - - - - - - - - - 0.789 secretin, transcript variant X6
90. ROS1 ENSGALG00000014913 7 0.789 - - - - - - - - - 0.789 ROS proto-oncogene 1, receptor tyrosine kinase [Source:NCBI gene;Acc:396192]
91. GPR12 ENSGALG00000017102 4 0.789 - - - - - - - - - 0.789 G protein-coupled receptor 12 [Source:HGNC Symbol;Acc:HGNC:4466]
92. MUC4 4 0.789 - - - - - - - - - 0.789 mucin 4, cell surface associated, transcript variant X5
93. DENND1B ENSGALG00000002246 6 0.786 - - - - - - - - - 0.786 DENN domain containing 1B [Source:HGNC Symbol;Acc:HGNC:28404]
94. STOML3 ENSGALG00000017039 6 0.783 - - - - - - - - - 0.783 stomatin like 3 [Source:HGNC Symbol;Acc:HGNC:19420]
95. CFH ENSGALG00000002431 31 0.783 - - - - - - - - - 0.783 complement factor H, transcript variant X1
96. CSF3 ENSGALG00000030907 11 0.783 - - - - - - - - - 0.783 colony stimulating factor 3 [Source:NCBI gene;Acc:396216]
97. BACH1 ENSGALG00000015828 114 0.782 - - - - - - - - - 0.782 BTB domain and CNC homolog 1 [Source:HGNC Symbol;Acc:HGNC:935]
98. ABHD17A ENSGALG00000041163 5578 0.781 - - - - - - - 0.781 - - abhydrolase domain containing 17A [Source:HGNC Symbol;Acc:HGNC:28756]
99. AQP1 ENSGALG00000005209 111 0.779 - - - - - - - - - 0.779 aquaporin 1 [Source:NCBI gene;Acc:420384]
100. CCR5 ENSGALG00000037077 23 0.778 - - - - - - - - - 0.778 C-C motif chemokine receptor 5 [Source:NCBI gene;Acc:420695]

There are 66 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA