Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RNF111

Gene Name Gene ID Reads Annotation
RNF111 ENSDARG00000078802 1357 ring finger protein 111 [Source:ZFIN;Acc:ZDB-GENE-070808-2]










Genes with expression patterns similar to RNF111

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RNF111 ENSDARG00000078802 1357 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ring finger protein 111 [Source:ZFIN;Acc:ZDB-GENE-070808-2]
2. NTAN1 ENSDARG00000105182 844 2.583 - 0.875 - - - 0.732 0.976 - - N-terminal asparagine amidase [Source:ZFIN;Acc:ZDB-GENE-040426-1896]
3. nrg2a ENSDARG00000077818 854 1.974 - - - - 0.995 - 0.979 - - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
4. bin2b ENSDARG00000010255 2649 1.973 - - - - 0.996 - 0.977 - - bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
5. ifrd1 ENSDARG00000068708 2858 1.953 - - - - 0.991 - 0.962 - - interferon-related developmental regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6132]
6. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 1.952 - - - - 0.992 - 0.960 - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
7. VPS37B_1 VPS37B_1 1816 1.947 - - - - 0.991 - 0.956 - -
8. dnttip2 ENSDARG00000057648 2381 1.912 - - - - 0.959 - 0.953 - - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
9. svopl ENSDARG00000057983, ENSDARG00000116460 975 1.897 - 0.921 - - - - 0.976 - - SVOP-like [Source:ZFIN;Acc:ZDB-GENE-041114-109]
10. ctdspla ENSDARG00000071673 1447 1.885 - 0.895 - - 0.990 - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
11. rac3b ENSDARG00000020795 1523 1.851 - 0.876 - - - - 0.975 - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
12. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 1.85 - - - - - 0.872 0.978 - - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
13. kif2c ENSDARG00000076228 2281 1.839 - 0.872 - - - - 0.967 - - kinesin family member 2C [Source:ZFIN;Acc:ZDB-GENE-070912-298]
14. smim7 ENSDARG00000074848 1260 1.835 - 0.844 - - 0.991 - - - - small integral membrane protein 7 [Source:ZFIN;Acc:ZDB-GENE-060810-180]
15. phf21ab ENSDARG00000021378 1706 1.83 - 0.847 - - - - 0.983 - - PHD finger protein 21Ab [Source:ZFIN;Acc:ZDB-GENE-030131-6456]
16. ARHGAP23 ARHGAP23 3946 1.827 - 0.923 - - - - 0.904 - -
17. NDUFA3 ENSDARG00000041400 7939 1.821 - - - - 0.954 - 0.867 - - NADH:ubiquinone oxidoreductase subunit A3 [Source:ZFIN;Acc:ZDB-GENE-040801-18]
18. cxcl14 ENSDARG00000056627, ENSDARG00000113190 4665 1.82 - 0.846 - - - - 0.974 - - chemokine (C-X-C motif) ligand 14 [Source:ZFIN;Acc:ZDB-GENE-000619-1]
19. myof ENSDARG00000006112 618 1.815 - 0.866 - - - - 0.949 - - myoferlin [Source:ZFIN;Acc:ZDB-GENE-040426-1138]
20. ankrd50l ENSDARG00000007077 1115 1.815 - 0.865 - - - - 0.950 - - ankyrin repeat domain 50-like [Source:ZFIN;Acc:ZDB-GENE-041008-117]
21. ppp1r7 ENSDARG00000009740 2606 1.813 - 0.852 - - 0.961 - - - - protein phosphatase 1, regulatory (inhibitor) subunit 7 [Source:ZFIN;Acc:ZDB-GENE-051113-288]
22. ARID3A ENSDARG00000070843 1613 1.804 - 0.814 - - 0.990 - - - - AT rich interactive domain 3A (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-140106-97]
23. gde1 ENSDARG00000055108, ENSDARG00000110855 1261 1.802 - 0.836 - - - - 0.966 - - glycerophosphodiester phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-881]
24. kbtbd7 ENSDARG00000078001 367 1.798 - - - - - 0.817 0.981 - - kelch repeat and BTB (POZ) domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-070912-204]
25. gmps ENSDARG00000079848 8217 1.782 - - - - 0.847 - 0.935 - - guanine monophosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1503]
26. fbln2 ENSDARG00000015156 1694 1.778 - 0.879 - - - - 0.899 - - fibulin 2 [Source:ZFIN;Acc:ZDB-GENE-060711-1]
27. ERO1LB ERO1LB 1433 1.774 - - - - 0.995 0.779 - - -
28. CABZ01079427.1 CABZ01079427.1 1682 1.766 - 0.784 - - - - 0.982 - -
29. snx1a ENSDARG00000071031 3975 1.766 - 0.780 - - 0.986 - - - - sorting nexin 1a [Source:ZFIN;Acc:ZDB-GENE-060302-3]
30. nelfa ENSDARG00000061411, ENSDARG00000116904 581 1.765 - - - - - - 0.974 0.791 - negative elongation factor complex member A [Source:ZFIN;Acc:ZDB-GENE-030131-6400]
31. CABZ01084579.1 CABZ01084579.1 7181 1.759 - 0.849 - - - - 0.910 - -
32. tjp2b ENSDARG00000023443 1654 1.758 - 0.820 - - - - 0.938 - - tight junction protein 2b (zona occludens 2) [Source:ZFIN;Acc:ZDB-GENE-040718-58]
33. mmab ENSDARG00000068344 526 1.746 - 0.772 - - - - 0.974 - - methylmalonic aciduria (cobalamin deficiency) cblB type [Source:ZFIN;Acc:ZDB-GENE-060526-232]
34. aph1b ENSDARG00000005612, ENSDARG00000111794 3318 1.744 - - - - - 0.794 0.950 - - APH1B gamma secretase subunit [Source:ZFIN;Acc:ZDB-GENE-031118-31]
35. esyt3 ENSDARG00000006422 335 1.737 - - - - - 0.764 0.973 - - extended synaptotagmin-like protein 3 [Source:ZFIN;Acc:ZDB-GENE-050809-35]
36. gstal gstal 1865 1.731 - - - - - 0.784 0.947 - -
37. laptm4a ENSDARG00000006397 1698 1.726 - 0.750 - - - - 0.976 - - lysosomal protein transmembrane 4 alpha [Source:ZFIN;Acc:ZDB-GENE-030131-1024]
38. cdc14b ENSDARG00000021483 4958 1.712 0.739 - - - - - 0.973 - - cell division cycle 14B [Source:ZFIN;Acc:ZDB-GENE-040426-820]
39. lipf ENSDARG00000018529 1849 1.71 - 0.834 - - - - 0.876 - - lipase, gastric [Source:ZFIN;Acc:ZDB-GENE-040426-2737]
40. PRODH2 PRODH2 1153 1.704 - - - - - 0.784 0.920 - -
41. ankrd13c ENSDARG00000103831 3593 1.703 - - - - - 0.777 0.926 - - ankyrin repeat domain 13C [Source:ZFIN;Acc:ZDB-GENE-030131-3892]
42. gpcpd1 ENSDARG00000016011 2563 1.697 - 0.893 - - - - 0.804 - - glycerophosphocholine phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-472]
43. psmb2 ENSDARG00000031511 4016 1.696 - 0.712 - - 0.984 - - - - proteasome subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-353]
44. fermt1 ENSDARG00000052652 2394 1.689 - 0.791 - - - - 0.898 - - fermitin family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3264]
45. ndst2a ENSDARG00000086269 754 1.678 - 0.837 - - - 0.841 - - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a [Source:ZFIN;Acc:ZDB-GENE-060810-182]
46. cebpg ENSDARG00000036073 3791 1.677 - 0.705 - - 0.972 - - - - CCAAT enhancer binding protein gamma [Source:ZFIN;Acc:ZDB-GENE-020111-5]
47. slc35c2 ENSDARG00000037517, ENSDARG00000114428 3644 1.667 - - - - 0.959 - 0.708 - - solute carrier family 35 (GDP-fucose transporter), member C2 [Source:ZFIN;Acc:ZDB-GENE-030131-2202]
48. anxa1b ENSDARG00000100095 7763 1.661 - 0.773 - - 0.888 - - - - annexin A1b [Source:ZFIN;Acc:ZDB-GENE-030131-6554]
49. tet3 ENSDARG00000062646 6672 1.661 - 0.727 - - 0.934 - - - - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
50. slc2a2 ENSDARG00000056196 2061 1.658 - 0.805 - - - - 0.853 - - solute carrier family 2 (facilitated glucose transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1213]
51. si:ch211-114l13.11 si:ch211-114l13.11 4727 1.655 - - - - - 0.744 0.911 - -
52. cry5 ENSDARG00000019498 90 1.653 - 0.861 - - - 0.792 - - - cryptochrome circadian clock 5 [Source:ZFIN;Acc:ZDB-GENE-010426-8]
53. herpud1 ENSDARG00000024314 1207 1.65 - 0.823 - - 0.827 - - - - homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 [Source:ZFIN;Acc:ZDB-GENE-050913-47]
54. cope ENSDARG00000018562 17276 1.648 - - - - 0.709 - 0.939 - - coatomer protein complex, subunit epsilon [Source:ZFIN;Acc:ZDB-GENE-041114-59]
55. si:ch211-106k21.5 ENSDARG00000086052 684 1.637 - 0.870 - - - 0.767 - - - si:ch211-106k21.5 [Source:ZFIN;Acc:ZDB-GENE-070912-7]
56. btr30 ENSDARG00000102591 506 1.62 - 0.824 - - - 0.796 - - - bloodthirsty-related gene family, member 30 [Source:ZFIN;Acc:ZDB-GENE-040426-1407]
57. UBE2D2 ENSDARG00000043484 11723 1.619 - - - - 0.764 - 0.855 - - ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-120312-1]
58. C22H6orf89 C22H6orf89 1076 1.615 - 0.854 - - - 0.761 - - -
59. slbp ENSDARG00000100558 3405 1.612 - 0.869 - - - 0.743 - - - stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
60. itgb1b.2 ENSDARG00000022689 523 1.588 - 0.863 - - - 0.725 - - - integrin, beta 1b.2 [Source:ZFIN;Acc:ZDB-GENE-040426-2598]
61. prc1b ENSDARG00000005993 780 1.538 - 0.785 - - - 0.753 - - - protein regulator of cytokinesis 1b [Source:ZFIN;Acc:ZDB-GENE-040426-777]
62. cnpy1 ENSDARG00000003757 1132 1.534 - 0.792 - - - 0.742 - - - canopy FGF signaling regulator 1 [Source:ZFIN;Acc:ZDB-GENE-060315-3]
63. mfsd8 ENSDARG00000103235, ENSDARG00000115968 2067 1.528 - 0.789 - - - - 0.739 - - major facilitator superfamily domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-060818-29]
64. PPP1R1B ENSDARG00000076280 352 1.524 - 0.740 - - - 0.784 - - - protein phosphatase 1, regulatory (inhibitor) subunit 1B [Source:ZFIN;Acc:ZDB-GENE-120126-1]
65. cpvl ENSDARG00000056480 2115 1.497 - 0.759 - - - 0.738 - - - carboxypeptidase, vitellogenic-like [Source:ZFIN;Acc:ZDB-GENE-031219-2]
66. cry1a cry1a 738 1.488 - 0.770 - - - 0.718 - - -
67. FBXO33 ENSDARG00000075400 1164 1.469 - 0.753 - - - 0.716 - - - F-box protein 33 [Source:ZFIN;Acc:ZDB-GENE-100618-2]
68. BX005175.1 ENSDARG00000112442 441 1.462 0.722 - - - - 0.740 - - - protein kinase C, delta b [Source:NCBI gene;Acc:100150844]
69. depdc7 232 1.444 0.736 - - - - 0.708 - - - DEP domain containing 7, transcript variant X1
70. acsl3a ENSDARG00000032079 897 1.441 0.705 - - - - - 0.736 - - acyl-CoA synthetase long chain family member 3a [Source:ZFIN;Acc:ZDB-GENE-050420-181]
71. tmem234 ENSDARG00000078333 488 0.997 - - - - 0.997 - - - - transmembrane protein 234 [Source:ZFIN;Acc:ZDB-GENE-090313-326]
72. C3H16orf89 C3H16orf89 449 0.997 - - - - 0.997 - - - -
73. git2b ENSDARG00000042791, ENSDARG00000111846 1332 0.997 - - - - 0.997 - - - - G protein-coupled receptor kinase interacting ArfGAP 2b [Source:ZFIN;Acc:ZDB-GENE-070112-2192]
74. sema3fa ENSDARG00000011163 759 0.996 - - - - 0.996 - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
75. trim24 ENSDARG00000103350 431 0.996 - - - - 0.996 - - - - tripartite motif containing 24 [Source:ZFIN;Acc:ZDB-GENE-030131-5913]
76. vldlr ENSDARG00000006257 772 0.996 - - - - 0.996 - - - - very low density lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-040426-803]
77. si:dkey-114e9.1 si:dkey-114e9.1 233 0.996 - - - - 0.996 - - - -
78. CABZ01073954.1 CABZ01073954.1 258 0.996 - - - - 0.996 - - - -
79. errfi1 errfi1 979 0.996 - - - - 0.996 - - - -
80. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 0.996 - - - - 0.996 - - - - synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
81. slc46a1 ENSDARG00000026149 297 0.996 - - - - 0.996 - - - - solute carrier family 46 (folate transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1012]
82. kcnq5a ENSDARG00000069954 492 0.996 - - - - 0.996 - - - - potassium voltage-gated channel, KQT-like subfamily, member 5a [Source:ZFIN;Acc:ZDB-GENE-090312-185]
83. epc1 epc1 1164 0.996 - - - - 0.996 - - - -
84. si:dkey-30k6.5 ENSDARG00000057238 617 0.996 - - - - 0.996 - - - - si:dkey-30k6.5 [Source:ZFIN;Acc:ZDB-GENE-091204-299]
85. si:dkey-70e17.2 si:dkey-70e17.2 371 0.996 - - - - 0.996 - - - -
86. pbx1a ENSDARG00000100494 854 0.996 - - - - 0.996 - - - - pre-B-cell leukemia homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000405-1]
87. ripk4 ENSDARG00000043211 775 0.995 - - - - 0.995 - - - - receptor-interacting serine-threonine kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2042]
88. elk3 ENSDARG00000018688, ENSDARG00000110853 1108 0.995 - - - - 0.995 - - - - ELK3, ETS-domain protein [Source:ZFIN;Acc:ZDB-GENE-030716-2]
89. slc4a2b ENSDARG00000052330 1900 0.995 - - - - 0.995 - - - - solute carrier family 4 (anion exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-030429-14]
90. acvr2aa ENSDARG00000011188 1454 0.995 - - - - 0.995 - - - - activin A receptor type 2Aa [Source:ZFIN;Acc:ZDB-GENE-980526-227]
91. wdr43 ENSDARG00000077264 1992 0.994 - - - - 0.994 - - - - WD repeat domain 43 [Source:ZFIN;Acc:ZDB-GENE-021231-3]
92. pim3 ENSDARG00000055129 1517 0.994 - - - - 0.994 - - - - Pim-3 proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050809-111]
93. inpp4aa ENSDARG00000063352 1297 0.994 - - - - 0.994 - - - - inositol polyphosphate-4-phosphatase type I Aa [Source:ZFIN;Acc:ZDB-GENE-060312-5]
94. gabpb2a ENSDARG00000007943 1570 0.994 - - - - 0.994 - - - - GA binding protein transcription factor subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5733]
95. ttc27 ENSDARG00000007918 1228 0.994 - - - - 0.994 - - - - tetratricopeptide repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-030102-1]
96. tpt1 ENSDARG00000092693 1110 0.994 - - - - 0.994 - - - - tumor protein, translationally-controlled 1 [Source:ZFIN;Acc:ZDB-GENE-990603-10]
97. klf11a ENSDARG00000030844 3972 0.993 - - - - 0.993 - - - - Kruppel-like factor 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3568]
98. slc48a1b ENSDARG00000026109 1427 0.993 - - - - 0.993 - - - - solute carrier family 48 (heme transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8226]
99. MARK3 MARK3 1767 0.993 - - - - 0.993 - - - -
100. KIF4A KIF4A 3322 0.993 - - - - 0.993 - - - -

There are 1484 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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