Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RNF11

Gene Name Gene ID Reads Annotation
RNF11 ENSGALG00000010539 8617 ring finger protein 11 [Source:NCBI gene;Acc:424631]











Genes with expression patterns similar to RNF11

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RNF11 ENSGALG00000010539 8617 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ring finger protein 11 [Source:NCBI gene;Acc:424631]
2. COL4A5 ENSGALG00000008141 15874 1.898 - - - - 0.903 - 0.995 - - - collagen type IV alpha 5 chain [Source:HGNC Symbol;Acc:HGNC:2207]
3. RALGAPA1 ENSGALG00000010088 6005 1.748 - - - - - - 0.997 0.751 - - Ral GTPase activating protein catalytic alpha subunit 1 [Source:NCBI gene;Acc:423327]
4. MSH2 ENSGALG00000008962 9709 1.744 - - - - - - 0.991 0.753 - - mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]
5. ADSL ENSGALG00000012034 10280 1.729 - - - - 0.950 - - 0.779 - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
6. FAM18B1 ENSGALG00000001335 5177 1.728 - - - - 0.958 - - 0.770 - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
7. TMEM258 ENSGALG00000038292 31116 1.711 - - - - - - 0.997 0.714 - - transmembrane protein 258 [Source:NCBI gene;Acc:422964]
8. TLK1 ENSGALG00000009569 5446 1.708 - - - - 0.946 - - 0.762 - - tousled like kinase 1 [Source:HGNC Symbol;Acc:HGNC:11841]
9. WSB2 ENSGALG00000008151 13246 1.707 - - - - 0.945 - - 0.762 - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
10. BTBD7 4136 1.697 - - - - 0.954 - - 0.743 - - BTB domain containing 7, transcript variant X2
11. MPPED1 ENSGALG00000014186 5726 1.683 - - - - 0.942 - - 0.741 - - metallophosphoesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1306]
12. NMT1 ENSGALG00000000857 5770 1.667 - - - - 0.952 - - 0.715 - - N-myristoyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:7857]
13. CRIPT ENSGALG00000010014 4311 1.664 - - - - 0.958 - - 0.706 - - CXXC repeat containing interactor of PDZ3 domain [Source:NCBI gene;Acc:421412]
14. ZNF217 ZNF217 14511 1.654 - - - - 0.909 - - 0.745 - -
15. UGDH ENSGALG00000041993 23474 1.649 - - - - 0.882 - 0.767 - - - UDP-glucose 6-dehydrogenase [Source:NCBI gene;Acc:422792]
16. PRKACB ENSGALG00000028530 12506 1.639 - - - - 0.887 - - 0.752 - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
17. ADSS ENSGALG00000010702 7207 1.52 - - - - - - - 0.711 0.809 - adenylosuccinate synthase [Source:NCBI gene;Acc:428579]
18. MYEOV2 MYEOV2 5155 1.442 - - 0.731 - - - - 0.711 - -
19. SESTD1 ENSGALG00000009031 13090 0.998 - - - - - - 0.998 - - - SEC14 and spectrin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18379]
20. SSB ENSGALG00000009677 25335 0.998 - - - - - - 0.998 - - - Sjogren syndrome antigen B [Source:NCBI gene;Acc:395268]
21. BCKDHB ENSGALG00000040702 9373 0.998 - - - - - - 0.998 - - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:NCBI gene;Acc:395375]
22. CTNNA1 ENSGALG00000002447 22379 0.998 - - - - - - 0.998 - - - catenin alpha 1 [Source:HGNC Symbol;Acc:HGNC:2509]
23. FASN ENSGALG00000040896 17372 0.998 - - - - - - 0.998 - - - fatty acid synthase [Source:NCBI gene;Acc:396061]
24. NUS1 ENSGALG00000014899 13352 0.997 - - - - - - 0.997 - - - NUS1, dehydrodolichyl diphosphate synthase subunit [Source:HGNC Symbol;Acc:HGNC:21042]
25. TPX2 ENSGALG00000006267 26087 0.997 - - - - - - 0.997 - - - TPX2, microtubule nucleation factor [Source:NCBI gene;Acc:395081]
26. RANBP3 ENSGALG00000000577 8856 0.997 - - - - - - 0.997 - - - RAN binding protein 3 [Source:HGNC Symbol;Acc:HGNC:9850]
27. INPP5K ENSGALG00000002739 8120 0.997 - - - - - - 0.997 - - - inositol polyphosphate-5-phosphatase K [Source:NCBI gene;Acc:771549]
28. UFSP2 ENSGALG00000010601 5809 0.997 - - - - - - 0.997 - - - UFM1 specific peptidase 2 [Source:NCBI gene;Acc:422542]
29. XRCC3 ENSGALG00000011533 3768 0.997 - - - - - - 0.997 - - - X-ray repair cross complementing 3 [Source:NCBI gene;Acc:423485]
30. DNAH17 1389 0.996 - - - - - - 0.996 - - - dynein axonemal heavy chain 17, transcript variant X6
31. PSMD7 ENSGALG00000000707 26350 0.996 - - - - - - 0.996 - - - proteasome 26S subunit, non-ATPase 7 [Source:HGNC Symbol;Acc:HGNC:9565]
32. RWDD2B ENSGALG00000015807 3601 0.996 - - - - - - 0.996 - - - RWD domain containing 2B [Source:HGNC Symbol;Acc:HGNC:1302]
33. ACAT1 ENSGALG00000017163 6239 0.996 - - - - - - 0.996 - - - acetyl-CoA acetyltransferase 1 [Source:NCBI gene;Acc:418968]
34. DGCR14 DGCR14 2633 0.996 - - - - - - 0.996 - - -
35. ENSGALG00000023608 ENSGALG00000023608 1538 0.996 - - - - - - 0.996 - - -
36. GCC1 ENSGALG00000033149 1915 0.996 - - - - - - 0.996 - - - GRIP and coiled-coil domain containing 1 [Source:NCBI gene;Acc:430581]
37. MAST4 ENSGALG00000014784 4153 0.996 - - - - - - 0.996 - - - microtubule associated serine/threonine kinase family member 4 [Source:HGNC Symbol;Acc:HGNC:19037]
38. CEP19 ENSGALG00000006405 1645 0.996 - - - - - - 0.996 - - - centrosomal protein 19 [Source:NCBI gene;Acc:424858]
39. HEY1 ENSGALG00000035031 8795 0.996 - - - - - - 0.996 - - - hes related family bHLH transcription factor with YRPW motif 1 [Source:HGNC Symbol;Acc:HGNC:4880]
40. ZNF385D ENSGALG00000011283 2578 0.996 - - - - - - 0.996 - - - zinc finger protein 385D [Source:HGNC Symbol;Acc:HGNC:26191]
41. USMG5 ENSGALG00000034645 33263 0.996 - - - - - - 0.996 - - - up-regulated during skeletal muscle growth 5 homolog (mouse) [Source:NCBI gene;Acc:423873]
42. ENSGALG00000023447 ENSGALG00000023447 17486 0.995 - - - - - - 0.995 - - -
43. RNF4 ENSGALG00000015668 15780 0.995 - - - - - - 0.995 - - - ring finger protein 4 [Source:NCBI gene;Acc:422886]
44. UFM1 ENSGALG00000017042 15794 0.995 - - - - - - 0.995 - - - ubiquitin fold modifier 1 [Source:NCBI gene;Acc:418894]
45. AP3B2 2331 0.995 - - - - - - 0.995 - - - adaptor related protein complex 3 beta 2 subunit, transcript variant X7
46. CKS1B ENSGALG00000028664 42261 0.992 - - - - - - 0.992 - - - CDC28 protein kinase regulatory subunit 1B [Source:NCBI gene;Acc:100134845]
47. SRPR SRPR 21067 0.992 - - - - - - 0.992 - - -
48. MRPS21 ENSGALG00000000456 35298 0.99 - - - - - - 0.990 - - - mitochondrial ribosomal protein S21 [Source:NCBI gene;Acc:426666]
49. CFL2 ENSGALG00000010027 16952 0.989 - - - - - - 0.989 - - - cofilin 2 [Source:NCBI gene;Acc:423320]
50. H3-IX_1 H3-IX_1 54392 0.981 - - - - - - 0.981 - - -
51. MAPRE1 ENSGALG00000006657 64346 0.976 - - - - - - 0.976 - - - microtubule associated protein RP/EB family member 1 [Source:NCBI gene;Acc:419288]
52. SOD2 ENSGALG00000011661 13178 0.968 - - - - 0.968 - - - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
53. RBM15B 5416 0.965 - - - - 0.965 - - - - - RNA binding motif protein 15B
54. KDM1A ENSGALG00000033469 20632 0.962 - - - - 0.962 - - - - - lysine demethylase 1A [Source:HGNC Symbol;Acc:HGNC:29079]
55. ZNF326 ENSGALG00000006113 15141 0.961 - - - - 0.961 - - - - - zinc finger protein 326 [Source:NCBI gene;Acc:424512]
56. HABP4 ENSGALG00000012628 2894 0.96 - - - - 0.960 - - - - - hyaluronan binding protein 4 [Source:NCBI gene;Acc:395444]
57. PAXIP1 ENSGALG00000036064 3120 0.96 - - - - 0.960 - - - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
58. SUGT1 ENSGALG00000016946 22881 0.959 - - - - 0.959 - - - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone [Source:NCBI gene;Acc:418827]
59. CNOT2 ENSGALG00000010042 7612 0.959 - - - - 0.959 - - - - - CCR4-NOT transcription complex subunit 2 [Source:NCBI gene;Acc:417851]
60. COPG2 ENSGALG00000008144 4542 0.959 - - - - 0.959 - - - - - coatomer protein complex subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:2237]
61. gga-mir-1778 ENSGALG00000025181 8765 0.957 - - - - 0.957 - - - - - gga-mir-1778 [Source:miRBase;Acc:MI0007521]
62. TXNDC9 ENSGALG00000032090 6804 0.957 - - - - 0.957 - - - - - thioredoxin domain containing 9 [Source:HGNC Symbol;Acc:HGNC:24110]
63. FOCAD ENSGALG00000015071 3677 0.957 - - - - 0.957 - - - - - focadhesin [Source:NCBI gene;Acc:427233]
64. TDRD3 ENSGALG00000016936 3412 0.957 - - - - 0.957 - - - - - tudor domain containing 3 [Source:NCBI gene;Acc:418823]
65. AIP ENSGALG00000040247 4166 0.956 - - - - 0.956 - - - - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
66. SMS ENSGALG00000016379 11607 0.956 - - - - 0.956 - - - - - spermine synthase [Source:NCBI gene;Acc:418602]
67. AEN ENSGALG00000044204 2633 0.956 - - - - 0.956 - - - - - apoptosis enhancing nuclease, transcript variant X1
68. MAP2K4 ENSGALG00000032178 5982 0.955 - - - - 0.955 - - - - - mitogen-activated protein kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6844]
69. RHBDF1 ENSGALG00000007434 2359 0.954 - - - - 0.954 - - - - - rhomboid 5 homolog 1 [Source:HGNC Symbol;Acc:HGNC:20561]
70. C9orf89 C9orf89 3056 0.954 - - - - 0.954 - - - - -
71. PIK3CD ENSGALG00000002583 1036 0.954 - - - - 0.954 - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta [Source:NCBI gene;Acc:419444]
72. ENSGALG00000005720 ENSGALG00000005720 1666 0.954 - - - - 0.954 - - - - -
73. TIMM21 ENSGALG00000013709 3215 0.953 - - - - 0.953 - - - - - translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
74. MAP3K13 ENSGALG00000006655 632 0.953 - - - - 0.953 - - - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
75. CCDC101 CCDC101 9111 0.953 - - - - 0.953 - - - - -
76. CSNK1E ENSGALG00000032257 2165 0.953 - - - - 0.953 - - - - - casein kinase 1 epsilon [Source:NCBI gene;Acc:378891]
77. TMEM65 ENSGALG00000037371 776 0.953 - - - - 0.953 - - - - - transmembrane protein 65 [Source:NCBI gene;Acc:428387]
78. CDR2L ENSGALG00000026295 4142 0.953 - - - - 0.953 - - - - - cerebellar degeneration related protein 2 like [Source:HGNC Symbol;Acc:HGNC:29999]
79. PCIF1 ENSGALG00000023547 867 0.953 - - - - 0.953 - - - - - PDX1 C-terminal inhibiting factor 1 [Source:HGNC Symbol;Acc:HGNC:16200]
80. EIF4G3 ENSGALG00000010084 5881 0.952 - - - - 0.952 - - - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
81. NOL12 ENSGALG00000012410 5658 0.952 - - - - 0.952 - - - - - nucleolar protein 12
82. MTG1 ENSGALG00000003549 5032 0.952 - - - - 0.952 - - - - - mitochondrial ribosome associated GTPase 1 [Source:NCBI gene;Acc:791224]
83. MAP1LC3A ENSGALG00000038721 2230 0.952 - - - - 0.952 - - - - - microtubule associated protein 1 light chain 3 alpha
84. PDXP ENSGALG00000023131 2663 0.952 - - - - 0.952 - - - - - pyridoxal phosphatase [Source:HGNC Symbol;Acc:HGNC:30259]
85. FBXW7 ENSGALG00000010103 5982 0.951 - - - - 0.951 - - - - - F-box and WD repeat domain containing 7 [Source:HGNC Symbol;Acc:HGNC:16712]
86. ASPM ENSGALG00000032398 12784 0.951 - - - - 0.951 - - - - - abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
87. TMEM167A ENSGALG00000027332 13862 0.951 - - - - 0.951 - - - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
88. DARS ENSGALG00000012355 2887 0.951 - - - - 0.951 - - - - - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
89. ITPK1 ENSGALG00000034898 4212 0.951 - - - - 0.951 - - - - - inositol-tetrakisphosphate 1-kinase [Source:NCBI gene;Acc:423421]
90. COPB2 ENSGALG00000005357 15208 0.951 - - - - 0.951 - - - - - coatomer protein complex subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:2232]
91. UTP15 ENSGALG00000013510 13122 0.951 - - - - 0.951 - - - - - UTP15, small subunit processome component [Source:NCBI gene;Acc:426152]
92. TIA1 ENSGALG00000013879 16330 0.951 - - - - 0.951 - - - - - TIA1 cytotoxic granule associated RNA binding protein [Source:NCBI gene;Acc:771327]
93. MXD4 ENSGALG00000015688 1472 0.95 - - - - 0.950 - - - - - MAX dimerization protein 4 [Source:NCBI gene;Acc:422890]
94. ZC3H15 ENSGALG00000041857 19808 0.95 - - - - 0.950 - - - - - zinc finger CCCH-type containing 15 [Source:NCBI gene;Acc:423992]
95. HNRNPA2B1 ENSGALG00000011036 53662 0.95 - - - - - - 0.950 - - - heterogeneous nuclear ribonucleoprotein A2/B1 [Source:NCBI gene;Acc:420627]
96. CLSPN ENSGALG00000002346 2590 0.95 - - - - 0.950 - - - - - claspin [Source:NCBI gene;Acc:428223]
97. LSMD1 LSMD1 2562 0.95 - - - - 0.950 - - - - -
98. RSU1 ENSGALG00000040891 12561 0.95 - - - - 0.950 - - - - - Ras suppressor protein 1 [Source:NCBI gene;Acc:420524]
99. B4GAL-T7 B4GAL-T7 12356 0.95 - - - - 0.950 - - - - -
100. KAT6A ENSGALG00000003641 2631 0.95 - - - - 0.950 - - - - - lysine acetyltransferase 6A [Source:HGNC Symbol;Acc:HGNC:13013]

There are 445 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA