Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RNASEH1

Gene Name Gene ID Reads Annotation
RNASEH1 ENSGALG00000016389 2694 ribonuclease H1 [Source:NCBI gene;Acc:395848]











Genes with expression patterns similar to RNASEH1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RNASEH1 ENSGALG00000016389 2694 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribonuclease H1 [Source:NCBI gene;Acc:395848]
2. NUDT6 ENSGALG00000011834 1309 1.75 - - - - - - - 0.901 0.849 - nudix hydrolase 6 [Source:HGNC Symbol;Acc:HGNC:8053]
3. RCAN3 ENSGALG00000004282 7778 1.745 - - - - - - 0.853 0.892 - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
4. SLC25A28 ENSGALG00000007479 4902 1.737 - - - - - - - 0.917 0.820 - solute carrier family 25 member 28 [Source:HGNC Symbol;Acc:HGNC:23472]
5. NDRG3 ENSGALG00000001492 5919 1.717 - - - - - - 0.794 0.923 - - NDRG family member 3 [Source:HGNC Symbol;Acc:HGNC:14462]
6. AIP ENSGALG00000040247 4166 1.705 - - - - - - 0.775 0.930 - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
7. PHF2 ENSGALG00000039208 2003 1.696 - - - - - - - 0.907 0.789 - PHD finger protein 2 [Source:HGNC Symbol;Acc:HGNC:8920]
8. ATP6V0A2 ENSGALG00000003194 4824 1.696 - - - - - - - 0.853 0.843 - ATPase H+ transporting V0 subunit a2 [Source:NCBI gene;Acc:395473]
9. PKN3 532 1.695 - - - - - - 0.796 0.899 - - protein kinase N3, transcript variant X2
10. CLCN7 ENSGALG00000030826 3173 1.669 - - - - - - 0.857 - 0.812 - chloride voltage-gated channel 7 [Source:NCBI gene;Acc:416656]
11. BIVM ENSGALG00000016861 3987 1.65 - - - - - - 0.836 0.814 - - basic, immunoglobulin-like variable motif containing [Source:NCBI gene;Acc:374099]
12. NPR2 ENSGALG00000027630 871 1.614 - - 0.709 - - - - 0.905 - - natriuretic peptide receptor 2 [Source:HGNC Symbol;Acc:HGNC:7944]
13. PRPF40A ENSGALG00000012526 7724 1.612 - - - - - - 0.804 0.808 - - pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
14. GLT8D1 ENSGALG00000001642 4232 1.59 - - - - - - - 0.861 0.729 - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
15. TLCD2 ENSGALG00000021592 1166 1.557 - - - - - - 0.798 - 0.759 - TLC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:33522]
16. NPNT ENSGALG00000043555 3002 1.522 - - - - - - - 0.794 0.728 - nephronectin [Source:HGNC Symbol;Acc:HGNC:27405]
17. C9orf64 ENSGALG00000012589 6097 1.516 - - - - - - - 0.799 0.717 - chromosome 9 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:28144]
18. UBR4 ENSGALG00000030563 5225 1.5 - - - - - - 0.733 0.767 - - ubiquitin protein ligase E3 component n-recognin 4 [Source:HGNC Symbol;Acc:HGNC:30313]
19. RNF185 ENSGALG00000006960 5428 1.484 - - - - - - 0.742 0.742 - - ring finger protein 185 [Source:NCBI gene;Acc:416965]
20. CEP170 ENSGALG00000010733 4177 1.476 - - 0.713 - - - 0.763 - - - centrosomal protein 170 [Source:HGNC Symbol;Acc:HGNC:28920]
21. SRF ENSGALG00000032029 6983 1.432 - - - - - - - 0.728 0.704 - serum response factor [Source:NCBI gene;Acc:396103]
22. ENTPD4 ENSGALG00000000390 1394 0.947 - - - - - - - 0.947 - - ectonucleoside triphosphate diphosphohydrolase 4 [Source:HGNC Symbol;Acc:HGNC:14573]
23. ITFG1 ENSGALG00000004049 2934 0.945 - - - - - - - 0.945 - - integrin alpha FG-GAP repeat containing 1 [Source:NCBI gene;Acc:415742]
24. BACE2 ENSGALG00000034932 1570 0.933 - - - - - - - 0.933 - - beta-secretase 2 [Source:HGNC Symbol;Acc:HGNC:934]
25. GKAP1 ENSGALG00000012586 2908 0.931 - - - - - - - 0.931 - - G kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:17496]
26. NPAT ENSGALG00000017162 1574 0.931 - - - - - - - 0.931 - - nuclear protein, coactivator of histone transcription [Source:HGNC Symbol;Acc:HGNC:7896]
27. UBN1 ENSGALG00000031416 2848 0.93 - - - - - - - 0.930 - - ubinuclein 1 [Source:NCBI gene;Acc:416398]
28. TMEM161A ENSGALG00000025809 2813 0.926 - - - - - - - 0.926 - - transmembrane protein 161A [Source:HGNC Symbol;Acc:HGNC:26020]
29. SPATA2 ENSGALG00000008026 2040 0.923 - - - - - - - 0.923 - - spermatogenesis associated 2 [Source:NCBI gene;Acc:419355]
30. AGRN ENSGALG00000039193 8135 0.922 - - - - - - - 0.922 - - agrin [Source:NCBI gene;Acc:396538]
31. DOK5 ENSGALG00000007786 1732 0.921 - - - - - - - 0.921 - - docking protein 5 [Source:HGNC Symbol;Acc:HGNC:16173]
32. SLC19A1 ENSGALG00000030511 1397 0.921 - - - - - - - 0.921 - - solute carrier family 19 member 1 [Source:NCBI gene;Acc:424034]
33. FGFR1 ENSGALG00000039786 4480 0.92 - - - - - - - 0.920 - - fibroblast growth factor receptor 1 [Source:NCBI gene;Acc:396516]
34. ARNTL2 ENSGALG00000014096 998 0.919 - - - - - - - 0.919 - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:NCBI gene;Acc:373925]
35. MTUS1 ENSGALG00000013615 1040 0.919 - - - - - - - 0.919 - - microtubule associated tumor suppressor 1, transcript variant X4
36. CCNL2 ENSGALG00000001551 2620 0.919 - - - - - - - 0.919 - - cyclin L2 [Source:NCBI gene;Acc:395124]
37. SMG8 ENSGALG00000005093 5557 0.919 - - - - - - - 0.919 - - SMG8 nonsense mediated mRNA decay factor
38. HAGHL ENSGALG00000021040 1568 0.918 - - - - - - - 0.918 - - hydroxyacylglutathione hydrolase-like [Source:NCBI gene;Acc:416536]
39. RIMKLB ENSGALG00000040184 281 0.916 - - - - - - - 0.916 - - ribosomal modification protein rimK like family member B [Source:HGNC Symbol;Acc:HGNC:29228]
40. SPATA2L ENSGALG00000044991 463 0.915 - - - - - - - 0.915 - - spermatogenesis associated 2 like [Source:HGNC Symbol;Acc:HGNC:28393]
41. BUD13 ENSGALG00000025882 1800 0.915 - - - - - - - 0.915 - - BUD13 homolog [Source:NCBI gene;Acc:428248]
42. TPM3 ENSGALG00000013537 934 0.914 - - - - - - - 0.914 - - Gallus gallus tropomyosin 3 (TPM3), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001352039]
43. ANGPTL1 ENSGALG00000004290 1922 0.913 - - - - - - - 0.913 - - angiopoietin like 1 [Source:NCBI gene;Acc:770850]
44. CLCN5 ENSGALG00000007234 1143 0.912 - - - - - - - 0.912 - - chloride voltage-gated channel 5 [Source:HGNC Symbol;Acc:HGNC:2023]
45. USP28 ENSGALG00000006969 2645 0.912 - - - - - - - 0.912 - - ubiquitin specific peptidase 28 [Source:NCBI gene;Acc:428246]
46. MORC3 ENSGALG00000036556 2976 0.912 - - - - - - 0.912 - - - MORC family CW-type zinc finger 3 [Source:NCBI gene;Acc:418513]
47. PECR ENSGALG00000011497 1714 0.912 - - - - - - - 0.912 - - peroxisomal trans-2-enoyl-CoA reductase [Source:NCBI gene;Acc:424224]
48. PPP2R3A ENSGALG00000034512 1091 0.911 - - - - - - - 0.911 - - protein phosphatase 2 regulatory subunit B''alpha [Source:HGNC Symbol;Acc:HGNC:9307]
49. TICAM1 ENSGALG00000026850 723 0.911 - - - - - - - 0.911 - - toll like receptor adaptor molecule 1 [Source:NCBI gene;Acc:100008585]
50. MTIF2 ENSGALG00000031265 2366 0.91 - - - - - - - 0.910 - - mitochondrial translational initiation factor 2 [Source:NCBI gene;Acc:421213]
51. NRG1 ENSGALG00000015422 196 0.909 - - - - - - - 0.909 - - neuregulin 1 [Source:NCBI gene;Acc:373906]
52. ZNF750 ENSGALG00000001518 151 0.909 - - - - - - - 0.909 - - zinc finger protein 750 [Source:HGNC Symbol;Acc:HGNC:25843]
53. KIAA1009 KIAA1009 1261 0.908 - - - - - - - 0.908 - -
54. ZNF384 ENSGALG00000032599 2369 0.907 - - - - - - - 0.907 - - zinc finger protein 384 [Source:NCBI gene;Acc:770350]
55. AGGF1 ENSGALG00000004311 3011 0.906 - - - - - - - 0.906 - - angiogenic factor with G-patch and FHA domains 1, transcript variant X1
56. LRIG3 ENSGALG00000009755 6655 0.904 - - - - - - - 0.904 - - leucine rich repeats and immunoglobulin like domains 3 [Source:NCBI gene;Acc:417813]
57. RASA3 ENSGALG00000016817 2146 0.904 - - - - - - - 0.904 - - RAS p21 protein activator 3 [Source:NCBI gene;Acc:418736]
58. ENSGALG00000021439 ENSGALG00000021439 628 0.904 - - - - - - - 0.904 - -
59. GPSM1 ENSGALG00000001797 943 0.903 - - - - - - - - 0.903 - G protein signaling modulator 1 [Source:HGNC Symbol;Acc:HGNC:17858]
60. APBB2 ENSGALG00000014262 569 0.902 - - - - - - - 0.902 - - amyloid beta precursor protein binding family B member 2 [Source:HGNC Symbol;Acc:HGNC:582]
61. ZBTB18 ENSGALG00000010705 3433 0.902 - - - - - - - 0.902 - - zinc finger and BTB domain containing 18 [Source:HGNC Symbol;Acc:HGNC:13030]
62. CRABP2 ENSGALG00000029140 559 0.902 - - - - - - - 0.902 - - cellular retinoic acid binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2339]
63. DMA DMA 1012 0.9 - - - - - - - 0.900 - -
64. ATP1B3 ENSGALG00000002764 1890 0.9 - - - - - - - 0.900 - - ATPase Na+/K+ transporting subunit beta 3 [Source:NCBI gene;Acc:396549]
65. PDZD8 ENSGALG00000029095 1068 0.9 - - - - - - - 0.900 - - PDZ domain containing 8 [Source:HGNC Symbol;Acc:HGNC:26974]
66. TXNDC11 ENSGALG00000003154 2224 0.9 - - - - - - - 0.900 - - thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
67. RBM46 ENSGALG00000009278 98 0.899 - - - - - - - 0.899 - - RNA binding motif protein 46 [Source:HGNC Symbol;Acc:HGNC:28401]
68. PAIP1 ENSGALG00000014867 202 0.899 - - - - - - - 0.899 - - poly(A) binding protein interacting protein 1 [Source:NCBI gene;Acc:427195]
69. SRR ENSGALG00000003155 93 0.898 - - - - - - - 0.898 - - serine racemase [Source:HGNC Symbol;Acc:HGNC:14398]
70. VPS13D ENSGALG00000034777 2350 0.898 - - - - - - - 0.898 - - vacuolar protein sorting 13 homolog D [Source:HGNC Symbol;Acc:HGNC:23595]
71. GPN3 ENSGALG00000003807 6320 0.897 - - - - - - 0.897 - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
72. SH3TC1 ENSGALG00000015568 484 0.897 - - - - - - - 0.897 - - SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
73. NT5C3B ENSGALG00000003651 5190 0.897 - - - - - - - 0.897 - - 5'-nucleotidase, cytosolic IIIB [Source:NCBI gene;Acc:420034]
74. MMP15 ENSGALG00000038758 49988 0.897 - - - - - - - 0.897 - - matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]
75. TRPC1 ENSGALG00000002639 296 0.896 - - - - - - - 0.896 - - transient receptor potential cation channel subfamily C member 1 [Source:NCBI gene;Acc:424776]
76. RFX7 ENSGALG00000041896 69 0.896 - - - - - - - 0.896 - - regulatory factor X7 [Source:HGNC Symbol;Acc:HGNC:25777]
77. EML1 1941 0.896 - - - - - - - 0.896 - - echinoderm microtubule associated protein like 1, transcript variant X11
78. ABHD12B ENSGALG00000020342 511 0.896 - - - - - - - 0.896 - - abhydrolase domain containing 12B, transcript variant X2
79. EPGN ENSGALG00000010859 187 0.896 - - - - - - - 0.896 - - epithelial mitogen [Source:NCBI gene;Acc:497270]
80. ENSGALG00000011233 ENSGALG00000011233 42 0.895 - - - - - - - 0.895 - -
81. gga-mir-1466 ENSGALG00000025170 487 0.895 - - - - - - - - 0.895 - gga-mir-1466 [Source:miRBase;Acc:MI0007071]
82. PCYOX1 ENSGALG00000013878 2200 0.895 - - - - - - - 0.895 - - prenylcysteine oxidase 1 [Source:HGNC Symbol;Acc:HGNC:20588]
83. KLF6 ENSGALG00000033178 679 0.895 - - - - - - - 0.895 - - Kruppel like factor 6 [Source:NCBI gene;Acc:420463]
84. CCDC117 ENSGALG00000005784 185 0.894 - - - - - - - 0.894 - - coiled-coil domain containing 117 [Source:HGNC Symbol;Acc:HGNC:26599]
85. G2E3 ENSGALG00000009907 1754 0.894 - - - - - - - 0.894 - - G2/M-phase specific E3 ubiquitin protein ligase [Source:NCBI gene;Acc:423305]
86. URM1 ENSGALG00000004971 17880 0.893 - - - - - - 0.893 - - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
87. GP1BB ENSGALG00000021529 348 0.893 - - - - - - - 0.893 - - glycoprotein Ib platelet subunit beta [Source:HGNC Symbol;Acc:HGNC:4440]
88. NCAPH ENSGALG00000032270 2103 0.892 - - - - - - - 0.892 - - non-SMC condensin I complex subunit H [Source:NCBI gene;Acc:425304]
89. ASTN2 ENSGALG00000007038 1748 0.892 - - - - - - - 0.892 - - astrotactin 2 [Source:HGNC Symbol;Acc:HGNC:17021]
90. FBXL8 ENSGALG00000003201 847 0.891 - - - - - - - 0.891 - - F-box and leucine rich repeat protein 8 [Source:NCBI gene;Acc:415701]
91. RPS6KA5 ENSGALG00000030580 218 0.891 - - - - - - - - 0.891 - ribosomal protein S6 kinase A5 [Source:NCBI gene;Acc:423408]
92. DBNDD2 ENSGALG00000003921 8301 0.89 - - - - - - 0.890 - - - dysbindin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15881]
93. ZYX ENSGALG00000014688 8686 0.886 - - - - - - 0.886 - - - zyxin [Source:NCBI gene;Acc:418300]
94. HOOK1 ENSGALG00000010889 1007 0.886 - - - - - - - 0.886 - - hook microtubule tethering protein 1 [Source:NCBI gene;Acc:424675]
95. BRCA1 ENSGALG00000002781 2052 0.885 - - - - - - - 0.885 - - BRCA1, DNA repair associated [Source:NCBI gene;Acc:373983]
96. PJA2 ENSGALG00000000264 1574 0.884 - - - - - - - - 0.884 - praja ring finger ubiquitin ligase 2, transcript variant X1
97. POLR1B ENSGALG00000032273 3845 0.884 - - - - - - - 0.884 - - RNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]
98. HSDL1 ENSGALG00000003273 1108 0.883 - - - - - - - - 0.883 - hydroxysteroid dehydrogenase like 1 [Source:NCBI gene;Acc:415703]
99. KIF21B ENSGALG00000034347 4144 0.883 - - - - - - - 0.883 - - kinesin family member 21B [Source:HGNC Symbol;Acc:HGNC:29442]
100. CCDC80 ENSGALG00000015193 1387 0.882 - - - - - - - 0.882 - - coiled-coil domain containing 80 [Source:NCBI gene;Acc:395074]

There are 586 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA