Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RLIM

Gene Name Gene ID Reads Annotation
RLIM ENSGALG00000007750 447 ring finger protein, LIM domain interacting [Source:NCBI gene;Acc:395630]











Genes with expression patterns similar to RLIM

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RLIM ENSGALG00000007750 447 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 ring finger protein, LIM domain interacting [Source:NCBI gene;Acc:395630]
2. ENSGALG00000012250 ENSGALG00000012250 581 0.829 - - - - - - - - - 0.829
3. ADORA2B ENSGALG00000014182 26 0.828 - - - - - - - - - 0.828 adenosine A2b receptor [Source:NCBI gene;Acc:395971]
4. AGRP ENSGALG00000002244 27 0.824 - - - - - - - - - 0.824 agouti related neuropeptide [Source:NCBI gene;Acc:427535]
5. WDR72 ENSGALG00000004545 5 0.823 - - - - - - - - - 0.823 WD repeat domain 72 [Source:HGNC Symbol;Acc:HGNC:26790]
6. CACNB2 ENSGALG00000008591 53 0.821 - - - - - - - - - 0.821 calcium voltage-gated channel auxiliary subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:1402]
7. NEIL3 ENSGALG00000010719 47 0.819 - - - - - - - - - 0.819 nei like DNA glycosylase 3 [Source:HGNC Symbol;Acc:HGNC:24573]
8. RPUSD2 ENSGALG00000041216 9 0.819 - - - - - - - - - 0.819 RNA pseudouridylate synthase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24180]
9. LCAT ENSGALG00000028928 484 0.812 - - - - - - - - - 0.812 lecithin-cholesterol acyltransferase [Source:NCBI gene;Acc:396136]
10. ST6GALNAC3 ENSGALG00000009027 17 0.811 - - - - - - - - - 0.811 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:19343]
11. HPD ENSGALG00000004343 244 0.803 - - - - - - - - - 0.803 4-hydroxyphenylpyruvate dioxygenase [Source:NCBI gene;Acc:416852]
12. SURF1 ENSGALG00000033754 2130 0.801 - - - - - - 0.801 - - - SURF1, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:417157]
13. ATP6V0E1 10 0.801 - - - - - - - - - 0.801 ATPase H+ transporting V0 subunit e1
14. PPM1H ENSGALG00000009805 3 0.801 - - - - - - - - - 0.801 protein phosphatase, Mg2+/Mn2+ dependent 1H [Source:HGNC Symbol;Acc:HGNC:18583]
15. CYP2H1 CYP2H1 363 0.801 - - - - - - - - - 0.801
16. ENSGALG00000016213 ENSGALG00000016213 33 0.801 - - - - - - - - - 0.801
17. AGO2 ENSGALG00000040957 25 0.801 - - - - - - - - - 0.801 argonaute 2, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3263]
18. HOXD11 ENSGALG00000039629 658 0.801 - - - - - - - - - 0.801 homeobox D11 [Source:NCBI gene;Acc:395328]
19. ENSGALG00000026657 ENSGALG00000026657 4 0.801 - - - - - - - - - 0.801
20. RAD54B ENSGALG00000043597 1699 0.8 - - - - - - 0.800 - - - RAD54 homolog B [Source:NCBI gene;Acc:395449]
21. DLX3 ENSGALG00000040529 37 0.799 - - - - - - - - - 0.799 Gallus gallus distal-less homeobox 3 (DLX3), mRNA. [Source:RefSeq mRNA;Acc:NM_204804]
22. TJP3 ENSGALG00000000748 45 0.797 - - - - - - - - - 0.797 tight junction protein 3 [Source:HGNC Symbol;Acc:HGNC:11829]
23. WDR41 ENSGALG00000004350 16 0.795 - - - - - - - - - 0.795 WD repeat domain 41 [Source:HGNC Symbol;Acc:HGNC:25601]
24. SLC12A8 ENSGALG00000012045 39 0.793 - - - - - - - - - 0.793 solute carrier family 12 member 8 [Source:HGNC Symbol;Acc:HGNC:15595]
25. CNST ENSGALG00000010649 18 0.792 - - - - - - - - - 0.792 consortin, connexin sorting protein [Source:HGNC Symbol;Acc:HGNC:26486]
26. KYNU ENSGALG00000012418 353 0.791 - - - - - - - - - 0.791 kynureninase, transcript variant X3
27. GEMIN5 ENSGALG00000003937 1685 0.79 - - - - - - - 0.790 - - gem nuclear organelle associated protein 5 [Source:HGNC Symbol;Acc:HGNC:20043]
28. HGF/SF HGF/SF 345 0.789 - - - - - - - - - 0.789
29. TPP1 52 0.784 - - - - - - - - - 0.784 tripeptidyl peptidase 1
30. HEATR2 HEATR2 2143 0.784 - - - - - - 0.784 - - -
31. ACSS1 ENSGALG00000008632 397 0.782 - - - - - - - - - 0.782 acyl-CoA synthetase short chain family member 1 [Source:HGNC Symbol;Acc:HGNC:16091]
32. TIPRL ENSGALG00000015246 7875 0.782 - - - - - - - 0.782 - - TOR signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:30231]
33. C11H16ORF70 C11H16ORF70 7 0.779 - - - - - - - - - 0.779
34. GON4L ENSGALG00000014643 1737 0.776 - - - - - - 0.776 - - - gon-4 like, transcript variant X2
35. LOC112532477 ENSGALG00000027520 40 0.775 - - - - - - - - - 0.775 fibrinogen-like protein 1-like protein
36. JAKMIP1 ENSGALG00000015528 11 0.774 - - - - - - - - - 0.774 janus kinase and microtubule interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:26460]
37. MAPK1 ENSGALG00000001501 34 0.773 - - - - - - - - - 0.773 mitogen-activated protein kinase 1 [Source:NCBI gene;Acc:373953]
38. WNT5B ENSGALG00000012998 35 0.773 - - - - - - - - - 0.773 Wnt family member 5B [Source:NCBI gene;Acc:418154]
39. SYNE1 ENSGALG00000013505 2324 0.77 - - - - - - - 0.770 - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
40. ADSS ENSGALG00000010702 7207 0.767 - - - - - - - 0.767 - - adenylosuccinate synthase [Source:NCBI gene;Acc:428579]
41. UROC1 ENSGALG00000006306 75 0.766 - - - - - - - - - 0.766 urocanate hydratase 1 [Source:HGNC Symbol;Acc:HGNC:26444]
42. ENSGALG00000016141 ENSGALG00000016141 10 0.76 - - - - - - - - - 0.760
43. VPS29L ENSGALG00000005951 31 0.759 - - - - - - - 0.759 - - VPS29 retromer complex component-like [Source:NCBI gene;Acc:416931]
44. GOSR1 ENSGALG00000004326 1556 0.757 - - - - - - - 0.757 - - golgi SNAP receptor complex member 1 [Source:NCBI gene;Acc:417591]
45. MVD ENSGALG00000007267 4374 0.757 - - - - - - - 0.757 - - mevalonate diphosphate decarboxylase [Source:HGNC Symbol;Acc:HGNC:7529]
46. MOB3C ENSGALG00000025946 164 0.755 - - - - - - - - - 0.755 MOB kinase activator 3C [Source:HGNC Symbol;Acc:HGNC:29800]
47. SOSTDC1 ENSGALG00000036836 1081 0.753 - - - - - - - 0.753 - - sclerostin domain containing 1 [Source:NCBI gene;Acc:378800]
48. DDX49 ENSGALG00000003130 5216 0.753 - - - - - - - 0.753 - - DEAD-box helicase 49 [Source:NCBI gene;Acc:420116]
49. LRRC8C ENSGALG00000006170 43 0.75 - - - - - - - - - 0.750 leucine rich repeat containing 8 VRAC subunit C [Source:HGNC Symbol;Acc:HGNC:25075]
50. C1orf159 ENSGALG00000027363 1672 0.75 - - - - - - - 0.750 - - chromosome 1 open reading frame 159 [Source:HGNC Symbol;Acc:HGNC:26062]
51. FAM13A ENSGALG00000010371 19 0.745 - - - - - - - - - 0.745 family with sequence similarity 13 member A [Source:HGNC Symbol;Acc:HGNC:19367]
52. TMEM206 ENSGALG00000009822 80 0.741 - - - - - - - - - 0.741 transmembrane protein 206 [Source:HGNC Symbol;Acc:HGNC:25593]
53. FANCB ENSGALG00000016569 1193 0.741 - - - - - - - 0.741 - - FA complementation group B [Source:NCBI gene;Acc:418628]
54. TANGO2 ENSGALG00000002056 1971 0.74 - - - - - - - 0.740 - - transport and golgi organization 2 homolog [Source:NCBI gene;Acc:416784]
55. KLHDC1 ENSGALG00000012241 349 0.739 - - - - - - - - - 0.739 kelch domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19836]
56. ENTPD7 ENSGALG00000023691 46 0.739 - - - - - - - - - 0.739 ectonucleoside triphosphate diphosphohydrolase 7 [Source:HGNC Symbol;Acc:HGNC:19745]
57. TMEM9 ENSGALG00000000226 635 0.734 - - - - - - - - - 0.734 transmembrane protein 9 [Source:HGNC Symbol;Acc:HGNC:18823]
58. COPS7B ENSGALG00000007752 1588 0.734 - - - - - - - 0.734 - - COP9 signalosome subunit 7B [Source:HGNC Symbol;Acc:HGNC:16760]
59. UIMC1 ENSGALG00000001158 22 0.734 - - - - - - - - - 0.734 ubiquitin interaction motif containing 1 [Source:HGNC Symbol;Acc:HGNC:30298]
60. EDN3 ENSGALG00000040880 1061 0.734 - - - - - - 0.734 - - - endothelin 3 [Source:HGNC Symbol;Acc:HGNC:3178]
61. ENSGALG00000026668 ENSGALG00000026668 34 0.734 - - - - - - - - - 0.734
62. RAB19 ENSGALG00000012850 155 0.732 - - - - - - - 0.732 - - RAB19, member RAS oncogene family [Source:NCBI gene;Acc:418113]
63. ENSGALG00000018733 ENSGALG00000018733 175 0.732 - - - - - - - - - 0.732
64. ENSGALG00000005445 ENSGALG00000005445 16 0.731 - - - - - - - - - 0.731
65. DISP3 ENSGALG00000004662 146 0.73 - - - - - - - - - 0.730 dispatched RND transporter family member 3 [Source:NCBI gene;Acc:419497]
66. LCOR ENSGALG00000028512 30 0.729 - - - - - - - - - 0.729 ligand dependent nuclear receptor corepressor, transcript variant X16
67. ENSGALG00000001886 ENSGALG00000001886 1024 0.729 - - - - - - - 0.729 - -
68. DEF6 ENSGALG00000002615 1038 0.729 - - - - - - - - - 0.729 DEF6, guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:2760]
69. FBP1 ENSGALG00000012613 258 0.728 - - - - - - - 0.728 - - fructose-bisphosphatase 1 [Source:NCBI gene;Acc:395218]
70. CNTN3 ENSGALG00000007862 193 0.728 - - - - - - - - - 0.728 contactin 3 [Source:HGNC Symbol;Acc:HGNC:2173]
71. KIAA1244 KIAA1244 62 0.728 - - - - - - - - - 0.728
72. SLC6A2 ENSGALG00000003560 108 0.728 - - - - - - - - - 0.728 solute carrier family 6 member 2 [Source:NCBI gene;Acc:395458]
73. G2E3 ENSGALG00000009907 1754 0.727 - - - - - - 0.727 - - - G2/M-phase specific E3 ubiquitin protein ligase [Source:NCBI gene;Acc:423305]
74. SYT17 ENSGALG00000030534 385 0.727 - - - - - - - 0.727 - - synaptotagmin 17 [Source:HGNC Symbol;Acc:HGNC:24119]
75. STRIP2 ENSGALG00000038520 616 0.726 - - - - - - - - - 0.726 striatin interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:22209]
76. TDRP ENSGALG00000016356 36 0.726 - - - - - - - - - 0.726 testis development related protein [Source:HGNC Symbol;Acc:HGNC:26951]
77. MFSD9 ENSGALG00000016792 40 0.724 - - - - - - - - - 0.724 major facilitator superfamily domain containing 9 [Source:HGNC Symbol;Acc:HGNC:28158]
78. TFB1M ENSGALG00000013647 84 0.723 - - - - - - - - - 0.723 transcription factor B1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:17037]
79. ZFAND3 ENSGALG00000010134 34 0.722 - - - - - - - - - 0.722 zinc finger AN1-type containing 3 [Source:HGNC Symbol;Acc:HGNC:18019]
80. EDNRA ENSGALG00000010013 2472 0.721 - - - - - - 0.721 - - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
81. SULF2 ENSGALG00000004593 428 0.719 - - - - - - 0.719 - - - sulfatase 2 [Source:HGNC Symbol;Acc:HGNC:20392]
82. SMG7 ENSGALG00000004667 707 0.718 - - - - - - - - - 0.718 SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
83. AUH ENSGALG00000021843 349 0.717 - - - - - - - - - 0.717 AU RNA binding methylglutaconyl-CoA hydratase [Source:NCBI gene;Acc:427269]
84. RSBN1 ENSGALG00000001860 761 0.717 - - - - - - 0.717 - - - round spermatid basic protein 1 [Source:HGNC Symbol;Acc:HGNC:25642]
85. CETN2 ENSGALG00000007510 1688 0.716 - - - - - - - 0.716 - - centrin 2 [Source:NCBI gene;Acc:422303]
86. PRKAA1 ENSGALG00000014832 547 0.716 - - - - - - - 0.716 - - protein kinase AMP-activated catalytic subunit alpha 1 [Source:NCBI gene;Acc:427185]
87. U2SURP ENSGALG00000002612 4255 0.715 - - - - - - 0.715 - - - U2 snRNP associated SURP domain containing [Source:HGNC Symbol;Acc:HGNC:30855]
88. FIBIN ENSGALG00000023904 3350 0.714 - - - - - - 0.714 - - - fin bud initiation factor homolog [Source:NCBI gene;Acc:426933]
89. XPNPEP3 ENSGALG00000012003 2253 0.71 - - - - - - 0.710 - - - X-prolyl aminopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:28052]
90. KIAA1671 ENSGALG00000005512 2540 0.71 - - - - - - - 0.710 - - KIAA1671 [Source:NCBI gene;Acc:768701]
91. CHD6 477 0.709 - - - - - - - 0.709 - - chromodomain helicase DNA binding protein 6, transcript variant X10
92. RIPK2 ENSGALG00000043535 671 0.707 - - - - - - - - - 0.707 receptor interacting serine/threonine kinase 2 [Source:NCBI gene;Acc:420215]
93. ZC3HAV1 ENSGALG00000013911 162 0.705 - - - - - - - - - 0.705 zinc finger CCCH-type containing, antiviral 1 [Source:NCBI gene;Acc:426315]
94. CPOX ENSGALG00000015240 5292 0.705 - - 0.705 - - - - - - - coproporphyrinogen oxidase
95. TSPAN4 ENSGALG00000006837 150 0.704 - - - - - - 0.704 - - - tetraspanin 4 [Source:HGNC Symbol;Acc:HGNC:11859]
96. CADM2 ENSGALG00000043393 810 0.704 - - - - - - 0.704 - - - cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:29849]
97. GPSM1 ENSGALG00000001797 943 0.703 - - - - - - - 0.703 - - G protein signaling modulator 1 [Source:HGNC Symbol;Acc:HGNC:17858]
98. TNIP2 ENSGALG00000015666 28 0.702 - - - - - - - - - 0.702 TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
99. MMACHC ENSGALG00000010234 77 0.702 - - - - - - - - - 0.702 methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria [Source:NCBI gene;Acc:424597]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA