Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RLIM

Gene Name Gene ID Reads Annotation
RLIM ENSDARG00000079306 514 ring finger protein, LIM domain interacting [Source:ZFIN;Acc:ZDB-GENE-120809-2]










Genes with expression patterns similar to RLIM

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RLIM ENSDARG00000079306 514 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ring finger protein, LIM domain interacting [Source:ZFIN;Acc:ZDB-GENE-120809-2]
2. nol8 ENSDARG00000044143 425 1.859 - 0.889 - - - - - - 0.970 nucleolar protein 8 [Source:ZFIN;Acc:ZDB-GENE-050208-491]
3. ddx41 666 1.853 - 0.911 - - - - - - 0.942 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
4. TUBB8P7_2 TUBB8P7_2 565 1.841 - 0.870 - - - - - - 0.971
5. xrcc6bp1 662 1.8 - 0.846 - - - - - - 0.954 XRCC6 binding protein 1
6. hdac10 ENSDARG00000086458 676 1.785 - 0.808 - - - - - - 0.977 histone deacetylase 10 [Source:ZFIN;Acc:ZDB-GENE-030131-5464]
7. cdnf ENSDARG00000075501, ENSDARG00000111042, ENSDARG00000112793 647 1.777 - 0.895 - - - - - - 0.882 cerebral dopamine neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-070410-37]
8. rbm34 ENSDARG00000101877 1573 1.774 - - - - - - 0.809 - 0.965 RNA binding motif protein 34 [Source:ZFIN;Acc:ZDB-GENE-040718-77]
9. gstal gstal 1865 1.758 - 0.882 - - - - - - 0.876
10. pif1 ENSDARG00000020289 216 1.735 - - - - - - 0.767 - 0.968 PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
11. FAAH ENSDARG00000077764 292 1.731 - 0.919 - - - - 0.812 - - fatty acid amide hydrolase [Source:ZFIN;Acc:ZDB-GENE-070619-3]
12. CDIP1 ENSDARG00000076118 1294 1.725 - - - - - - 0.766 - 0.959 cell death-inducing p53 target 1 [Source:ZFIN;Acc:ZDB-GENE-070720-18]
13. polr2c ENSDARG00000033596, ENSDARG00000111144, ENSDARG00000113715 1388 1.724 - - - - - - 0.822 - 0.902 polymerase (RNA) II (DNA directed) polypeptide C [Source:ZFIN;Acc:ZDB-GENE-030131-6609]
14. fam122b ENSDARG00000036500, ENSDARG00000116582 1408 1.721 - 0.758 - - - - - - 0.963 family with sequence similarity 122B [Source:ZFIN;Acc:ZDB-GENE-040801-204]
15. CCNDBP1 ENSDARG00000039328 486 1.721 - 0.933 - - - - 0.788 - - cyclin D-type binding-protein 1 [Source:ZFIN;Acc:ZDB-GENE-070410-17]
16. spryd7a ENSDARG00000052624 1059 1.719 - 0.818 - - - - - - 0.901 SPRY domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-040426-2713]
17. SPIN4_1 SPIN4_1 2562 1.717 - 0.871 - - - - - - 0.846
18. taz ENSDARG00000041421 985 1.712 - - - - - - 0.759 - 0.953 tafazzin [Source:ZFIN;Acc:ZDB-GENE-030131-684]
19. aftpha ENSDARG00000069249 867 1.709 - 0.775 - - - - - - 0.934 aftiphilin a [Source:ZFIN;Acc:ZDB-GENE-030131-1437]
20. ankrd46a ENSDARG00000044328 482 1.692 - 0.894 - - - - 0.798 - - ankyrin repeat domain 46a [Source:ZFIN;Acc:ZDB-GENE-030131-2643]
21. bre bre 1233 1.691 - 0.783 - - - - - - 0.908
22. prss35 ENSDARG00000100691, ENSDARG00000109353 2333 1.686 - 0.864 - - - - - - 0.822 protease, serine, 35 [Source:ZFIN;Acc:ZDB-GENE-040704-55]
23. ppt2 ENSDARG00000104542 888 1.681 - - - - - - 0.780 - 0.901 palmitoyl-protein thioesterase 2 [Source:ZFIN;Acc:ZDB-GENE-010430-4]
24. dhdds ENSDARG00000039851 1135 1.679 - 0.723 - - - - - - 0.956 dehydrodolichyl diphosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2236]
25. zbtb5 1484 1.675 - 0.907 - - - 0.768 - - - zinc finger and BTB domain containing 5
26. tom1l2 ENSDARG00000009217, ENSDARG00000111492 1639 1.674 - - - - - - 0.752 - 0.922 target of myb1 like 2 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-061013-3]
27. eya3 ENSDARG00000036100 1965 1.671 - - - - - - 0.751 - 0.920 EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
28. FRG1 ENSDARG00000056504 1196 1.669 - 0.789 - - - - - - 0.880 FSHD region gene 1 [Source:ZFIN;Acc:ZDB-GENE-050417-324]
29. melk ENSDARG00000030759 1150 1.662 - 0.744 - - - - - - 0.918 maternal embryonic leucine zipper kinase [Source:ZFIN;Acc:ZDB-GENE-990603-5]
30. hic1l ENSDARG00000045660 1489 1.654 - - - - - 0.711 - - 0.943 hypermethylated in cancer 1 like [Source:ZFIN;Acc:ZDB-GENE-030620-1]
31. nploc4 ENSDARG00000100487 1262 1.642 - 0.723 - - - - - - 0.919 NPL4 homolog, ubiquitin recognition factor [Source:ZFIN;Acc:ZDB-GENE-030131-5658]
32. stard8 ENSDARG00000014003, ENSDARG00000114410 1237 1.64 - 0.743 - - - - - - 0.897 StAR-related lipid transfer (START) domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030131-9447]
33. cpsf1 ENSDARG00000034178 2036 1.639 - 0.768 - - - - - - 0.871 cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]
34. arfip1 ENSDARG00000070055, ENSDARG00000116473 3113 1.638 - 0.735 - - - - - - 0.903 ADP-ribosylation factor interacting protein 1 (arfaptin 1) [Source:ZFIN;Acc:ZDB-GENE-040426-2690]
35. 5S_rRNA_21 5S_rRNA_21 1323 1.609 - 0.771 - - - - - - 0.838
36. tox3 ENSDARG00000073957 3075 1.579 - 0.788 - - - - - - 0.791 TOX high mobility group box family member 3 [Source:ZFIN;Acc:ZDB-GENE-090312-209]
37. si:rp71-61h23.4 1921 1.579 - - - - - - 0.710 - 0.869 si:rp71-61h23.4
38. zgc:112496 ENSDARG00000004274 1258 1.571 - 0.769 - - - - 0.802 - - zgc:112496 [Source:ZFIN;Acc:ZDB-GENE-050320-25]
39. RNASEH2C ENSDARG00000089637 1673 1.546 - - - - - 0.731 - - 0.815 ribonuclease H2, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-2469]
40. cpsf2 ENSDARG00000028971 841 1.524 - 0.716 - - - 0.808 - - - cleavage and polyadenylation specific factor 2 [Source:ZFIN;Acc:ZDB-GENE-040718-79]
41. dnajc10 ENSDARG00000074727 1523 1.508 - 0.791 - - - - 0.717 - - DnaJ (Hsp40) homolog, subfamily C, member 10 [Source:ZFIN;Acc:ZDB-GENE-070327-1]
42. ranbp9 ENSDARG00000061048 2687 1.503 - - - - - - 0.720 - 0.783 RAN binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-021030-5]
43. ssb ENSDARG00000029252 3394 1.501 0.708 - - - - - - - 0.793 Sjogren syndrome antigen B (autoantigen La) [Source:ZFIN;Acc:ZDB-GENE-030131-223]
44. CR383676.3 CR383676.3 2650 1.483 - 0.754 - - - - 0.729 - -
45. slc3a2b ENSDARG00000037012 839 1.472 - 0.730 - - - - 0.742 - - solute carrier family 3 (amino acid transporter heavy chain), member 2b [Source:ZFIN;Acc:ZDB-GENE-040122-2]
46. CPEB2 ENSDARG00000052604 2646 1.462 - 0.727 - - - - - - 0.735 cytoplasmic polyadenylation element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-130530-639]
47. SENP1 SENP1 1122 1.456 - - - - - 0.722 0.734 - -
48. nsun2 ENSDARG00000056665 740 0.979 - - - - - - - - 0.979 NOP2/Sun RNA methyltransferase family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4017]
49. ptn ENSDARG00000102340 229 0.979 - - - - - - - - 0.979 pleiotrophin [Source:ZFIN;Acc:ZDB-GENE-030624-1]
50. ZNF337_4 ZNF337_4 409 0.978 - - - - - - - - 0.978
51. PRDM12 PRDM12 133 0.978 - - - - - - - - 0.978
52. CABZ01054405.1 CABZ01054405.1 115 0.977 - - - - - - - - 0.977
53. creg2 ENSDARG00000000666 643 0.977 - - - - - - - - 0.977 cellular repressor of E1A-stimulated genes 2 [Source:ZFIN;Acc:ZDB-GENE-041114-173]
54. SNAP91 ENSDARG00000098809 556 0.977 - - - - - - - - 0.977 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
55. ttc21b ENSDARG00000012368 229 0.976 - - - - - - - - 0.976 tetratricopeptide repeat domain 21B [Source:ZFIN;Acc:ZDB-GENE-031010-34]
56. si:dkey-156k2.6 si:dkey-156k2.6 848 0.976 - - - - - - - - 0.976
57. tspan5b ENSDARG00000070449 1056 0.975 - - - - - - - - 0.975 tetraspanin 5b [Source:ZFIN;Acc:ZDB-GENE-041212-12]
58. KLF8 ENSDARG00000060661 219 0.975 - - - - - - - - 0.975 Kruppel-like factor 8 [Source:ZFIN;Acc:ZDB-GENE-070424-152]
59. ube3d ENSDARG00000026178 244 0.975 - - - - - - - - 0.975 ubiquitin protein ligase E3D [Source:ZFIN;Acc:ZDB-GENE-091218-3]
60. ZNFX1 ENSDARG00000100280 118 0.974 - - - - - - - - 0.974 zinc finger, NFX1-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-110804-2]
61. st8sia5 ENSDARG00000036584 529 0.974 - - - - - - - - 0.974 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
62. qser1 ENSDARG00000074750 597 0.974 - - - - - - - - 0.974 glutamine and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2978]
63. rnf121 ENSDARG00000060282 1809 0.974 - - - - - - - - 0.974 ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
64. CTIF ENSDARG00000090617 270 0.973 - - - - - - - - 0.973 CBP80/20-dependent translation initiation factor [Source:ZFIN;Acc:ZDB-GENE-130530-1003]
65. cdan1 ENSDARG00000042261 658 0.973 - - - - - - - - 0.973 codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
66. abcg1 ENSDARG00000063475 97 0.973 - - - - - - - - 0.973 ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
67. prmt6 ENSDARG00000069706 484 0.973 - - - - - - - - 0.973 protein arginine methyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-040914-7]
68. zgc:173480 171 0.973 - - - - - - - - 0.973 zgc:173480
69. CR678040.1 CR678040.1 117 0.973 - - - - - - - - 0.973
70. gpr143 ENSDARG00000034572 559 0.972 - - - - - - - - 0.972 G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
71. si:ch211-113e8.10 ENSDARG00000079631 498 0.972 - - - - - - - - 0.972 si:ch211-113e8.10 [Source:ZFIN;Acc:ZDB-GENE-090313-11]
72. oraov1 497 0.972 - - - - - - - - 0.972 oral cancer overexpressed 1
73. rcbtb1 ENSDARG00000036645 255 0.972 - - - - - - - - 0.972 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7951]
74. nupl2 ENSDARG00000029043 105 0.972 - - - - - - - - 0.972 nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
75. rab11fip3 ENSDARG00000016490 661 0.972 - - - - - - - - 0.972 RAB11 family interacting protein 3 (class II) [Source:ZFIN;Acc:ZDB-GENE-040724-138]
76. ltc4s ENSDARG00000062598 138 0.971 - - - - - - - - 0.971 leukotriene C4 synthase [Source:ZFIN;Acc:ZDB-GENE-110411-32]
77. slc6a6a ENSDARG00000012534 183 0.971 - - - - - - - - 0.971 solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
78. TAF2 ENSDARG00000102307 1401 0.971 - - - - - - - - 0.971 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
79. si:ch211-133l11.10 ENSDARG00000005626 381 0.971 - - - - - - - - 0.971 si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
80. kcnq5a ENSDARG00000069954 492 0.971 - - - - - - - - 0.971 potassium voltage-gated channel, KQT-like subfamily, member 5a [Source:ZFIN;Acc:ZDB-GENE-090312-185]
81. ZFAT ENSDARG00000077987 205 0.971 - - - - - - - - 0.971 zinc finger and AT hook domain containing [Source:ZFIN;Acc:ZDB-GENE-130204-2]
82. rxrgb ENSDARG00000004697 332 0.97 - - - - - - - - 0.970 retinoid X receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-040718-34]
83. flrt1a 107 0.97 - - - - - - - - 0.970 fibronectin leucine rich transmembrane protein 1a, transcript variant X2
84. umps ENSDARG00000012215 4564 0.97 - - - - - - - - 0.970 uridine monophosphate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-785]
85. mapk7 ENSDARG00000023110 455 0.97 - - - - - - - - 0.970 mitogen-activated protein kinase 7 [Source:ZFIN;Acc:ZDB-GENE-050320-10]
86. ptprk ENSDARG00000063416 742 0.97 - - - - - - - - 0.970 protein tyrosine phosphatase, receptor type, K [Source:ZFIN;Acc:ZDB-GENE-030131-9834]
87. NHS NHS 409 0.97 - - - - - - - - 0.970
88. si:dkey-114c15.7 237 0.97 - - - - - - - - 0.970 si:dkey-114c15.7
89. zfyve9a ENSDARG00000101903 437 0.969 - - - - - - - - 0.969 zinc finger, FYVE domain containing 9a [Source:ZFIN;Acc:ZDB-GENE-070705-182]
90. ankzf1 ENSDARG00000041904 917 0.969 - - - - - - - - 0.969 ankyrin repeat and zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050309-80]
91. dvl1b ENSDARG00000055552 146 0.969 - - - - - - - - 0.969 dishevelled segment polarity protein 1b [Source:ZFIN;Acc:ZDB-GENE-071004-1]
92. mafg2 mafg2 1041 0.969 - - - - - - - - 0.969
93. AKAP12 AKAP12 140 0.969 - - - - - - - - 0.969
94. cenpk ENSDARG00000039616 744 0.969 - - - - - - - - 0.969 centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
95. RFFL_1 RFFL_1 157 0.969 - - - - - - - - 0.969
96. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 0.969 - - - - - - - - 0.969 si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
97. slc25a43 ENSDARG00000102048 489 0.968 - - - - - - - - 0.968 solute carrier family 25, member 43 [Source:ZFIN;Acc:ZDB-GENE-030616-69]
98. ZNF518B 475 0.968 - - - - - - - - 0.968 zinc finger protein 518B
99. sema4ab ENSDARG00000062352 409 0.968 - - - - - - - - 0.968 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ab [Source:ZFIN;Acc:ZDB-GENE-060503-363]
100. ncam2 ENSDARG00000017466 175 0.968 - - - - - - - - 0.968 neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]

There are 1012 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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