Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RIT1

Gene Name Gene ID Reads Annotation
RIT1 ENSGALG00000014647 7174 Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]











Genes with expression patterns similar to RIT1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RIT1 ENSGALG00000014647 7174 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
2. NAA16 ENSGALG00000032808 3366 2.419 - - 0.817 - - - 0.840 - - 0.762 N(alpha)-acetyltransferase 16, NatA auxiliary subunit [Source:HGNC Symbol;Acc:HGNC:26164]
3. CCNC ENSGALG00000015471 6497 2.204 - - 0.703 - - - - 0.782 0.719 - cyclin C [Source:NCBI gene;Acc:421791]
4. CRIPT ENSGALG00000010014 4311 1.723 - - - - - - - 0.826 0.897 - CXXC repeat containing interactor of PDZ3 domain [Source:NCBI gene;Acc:421412]
5. TLN1 ENSGALG00000002548 489 1.71 - - - - - - - - 0.870 0.840 talin 1 [Source:NCBI gene;Acc:395194]
6. SETD3 ENSGALG00000034802 4125 1.692 - - 0.866 - - - - 0.826 - - SET domain containing 3 [Source:NCBI gene;Acc:423445]
7. SORCS1 ENSGALG00000008465 468 1.679 - - 0.815 - - - - - - 0.864 sortilin related VPS10 domain containing receptor 1 [Source:HGNC Symbol;Acc:HGNC:16697]
8. CHD2 ENSGALG00000006949 1076 1.651 - - - - - - - - 0.836 0.815 chromodomain helicase DNA binding protein 2 [Source:NCBI gene;Acc:415507]
9. CCNK ENSGALG00000011138 6416 1.647 - - 0.744 - - - 0.903 - - - cyclin K [Source:NCBI gene;Acc:423446]
10. NUMB ENSGALG00000009300 4220 1.639 - - - - - - 0.788 0.851 - - NUMB, endocytic adaptor protein [Source:NCBI gene;Acc:395639]
11. MYO18A ENSGALG00000003741 1023 1.636 - - 0.798 - - - - - - 0.838 myosin XVIIIA [Source:HGNC Symbol;Acc:HGNC:31104]
12. TRIP12 ENSGALG00000002929 11713 1.626 - - 0.768 - - - 0.858 - - - thyroid hormone receptor interactor 12 [Source:HGNC Symbol;Acc:HGNC:12306]
13. PIH1D3 ENSGALG00000004870 1365 1.622 - - 0.784 - - - - - 0.838 - PIH1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28570]
14. RUFY2 1442 1.621 - - 0.755 - - - - - 0.866 - RUN and FYVE domain containing 2, transcript variant X1
15. USP15 ENSGALG00000030024 2761 1.615 - - 0.837 - - - - - - 0.778 ubiquitin specific peptidase 15 [Source:NCBI gene;Acc:395644]
16. AXIN1 ENSGALG00000029402 2802 1.611 - - 0.830 - - - 0.781 - - - axin 1 [Source:NCBI gene;Acc:395786]
17. TLK1 ENSGALG00000009569 5446 1.609 - - - - - - 0.754 0.855 - - tousled like kinase 1 [Source:HGNC Symbol;Acc:HGNC:11841]
18. VPS8 ENSGALG00000006704 5419 1.607 - - - - - - - 0.791 - 0.816 VPS8, CORVET complex subunit [Source:HGNC Symbol;Acc:HGNC:29122]
19. C5H15ORF29 C5H15ORF29 3709 1.607 - - - - - - 0.778 0.829 - -
20. RNF126 ENSGALG00000042948 4724 1.605 - - - - - - - 0.761 - 0.844 ring finger protein 126 [Source:NCBI gene;Acc:420085]
21. LRP12 ENSGALG00000033630 2534 1.604 - - - - - - 0.767 - 0.837 - LDL receptor related protein 12 [Source:HGNC Symbol;Acc:HGNC:31708]
22. URM1 ENSGALG00000004971 17880 1.601 - - - - - - 0.843 0.758 - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
23. YIPF4 ENSGALG00000010547 4337 1.596 - - - - - - - 0.834 0.762 - Yip1 domain family member 4 [Source:NCBI gene;Acc:421464]
24. NPHP4 ENSGALG00000000966 1698 1.594 - - - - - - 0.824 - - 0.770 nephrocystin 4, transcript variant X5
25. PSMD13 ENSGALG00000043684 14720 1.592 - - - - - - - 0.830 - 0.762 proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
26. LONP1 ENSGALG00000040492 7133 1.591 - - - - - - 0.870 - 0.721 - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
27. HELLS ENSGALG00000005451 7094 1.587 - - - - - - 0.799 0.788 - - helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
28. CEP170 ENSGALG00000010733 4177 1.583 - - - - - - 0.776 - 0.807 - centrosomal protein 170 [Source:HGNC Symbol;Acc:HGNC:28920]
29. SUV39H2 ENSGALG00000013920 4360 1.583 - - - - - - 0.879 0.704 - - suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
30. TTLL5 ENSGALG00000010340 4875 1.582 - - - - - - - 0.803 0.779 - tubulin tyrosine ligase like 5 [Source:NCBI gene;Acc:423367]
31. SCAF4 ENSGALG00000033965 2027 1.582 - - - - - - 0.757 - - 0.825 SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
32. SDCBP ENSGALG00000015436 1228 1.579 - - 0.756 - - - - - - 0.823 syndecan binding protein [Source:NCBI gene;Acc:421136]
33. PSMC5 ENSGALG00000000349 21346 1.578 - - 0.787 - - - 0.791 - - - proteasome 26S subunit, ATPase 5 [Source:NCBI gene;Acc:428274]
34. PSMD10 ENSGALG00000008287 11380 1.576 - - - - - - 0.828 0.748 - - proteasome 26S subunit, non-ATPase 10 [Source:NCBI gene;Acc:422351]
35. RABEP1 ENSGALG00000001737 2650 1.576 - - - - - - - 0.736 0.840 - rabaptin, RAB GTPase binding effector protein 1 [Source:NCBI gene;Acc:395930]
36. RPE ENSGALG00000002847 7644 1.576 - - - - - - 0.854 0.722 - - ribulose-5-phosphate-3-epimerase, transcript variant X2
37. SPCS2 ENSGALG00000019036 9496 1.572 - - - - - - 0.812 0.760 - - signal peptidase complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:28962]
38. FAM207A ENSGALG00000007513 8748 1.57 - - - - - - 0.798 0.772 - - family with sequence similarity 207 member A [Source:HGNC Symbol;Acc:HGNC:15811]
39. KLHL15 ENSGALG00000016345 1638 1.564 - - 0.750 - - - - - 0.814 - kelch like family member 15 [Source:NCBI gene;Acc:418598]
40. NEK4 ENSGALG00000041428 4473 1.564 - - - - - - 0.835 0.729 - - NIMA related kinase 4 [Source:HGNC Symbol;Acc:HGNC:11399]
41. SRSF5 ENSGALG00000009421 8502 1.563 - - - - - - 0.778 0.785 - - serine and arginine rich splicing factor 5 [Source:NCBI gene;Acc:423258]
42. DDX18 ENSGALG00000012147 12463 1.559 - - 0.802 - - - - - 0.757 - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
43. E2F7 ENSGALG00000031340 3430 1.559 - - - - - - 0.757 0.802 - - E2F transcription factor 7 [Source:HGNC Symbol;Acc:HGNC:23820]
44. ENSGALG00000005870 ENSGALG00000005870 4343 1.557 - - - - - - 0.761 0.796 - -
45. TGDS ENSGALG00000016898 3206 1.556 - - - - - - 0.787 0.769 - - TDP-glucose 4,6-dehydratase [Source:HGNC Symbol;Acc:HGNC:20324]
46. CPOX ENSGALG00000015240 5292 1.555 - - - - - - 0.725 0.830 - - coproporphyrinogen oxidase
47. NIPA2 ENSGALG00000016737 3792 1.555 - - - - - - 0.851 - - 0.704 NIPA magnesium transporter 2 [Source:NCBI gene;Acc:418680]
48. EBAG9 ENSGALG00000036293 10058 1.554 - - - - - - 0.791 0.763 - - estrogen receptor binding site associated, antigen, 9 [Source:NCBI gene;Acc:420276]
49. PAPD7 ENSGALG00000013061 2031 1.554 - - - - - - 0.845 0.709 - - poly(A) RNA polymerase D7, non-canonical [Source:NCBI gene;Acc:770425]
50. FN3KRP ENSGALG00000028979 4160 1.551 - - - - - - 0.777 0.774 - - fructosamine 3 kinase related protein [Source:NCBI gene;Acc:417336]
51. C19H17ORF85 C19H17ORF85 2538 1.551 - - 0.809 - - - - 0.742 - -
52. TSEN2 ENSGALG00000004981 1929 1.55 - - 0.799 - - - - - 0.751 - tRNA splicing endonuclease subunit 2 [Source:NCBI gene;Acc:415965]
53. TBRG4 ENSGALG00000038102 9269 1.548 - - - - - - - 0.838 - 0.710 transforming growth factor beta regulator 4 [Source:HGNC Symbol;Acc:HGNC:17443]
54. PARN ENSGALG00000003091 6363 1.546 - - - - - - 0.825 0.721 - - poly(A)-specific ribonuclease [Source:NCBI gene;Acc:416423]
55. EXOSC8 ENSGALG00000017048 2939 1.544 - - - - - - - 0.772 0.772 - exosome component 8 [Source:HGNC Symbol;Acc:HGNC:17035]
56. ORC4 ENSGALG00000012448 8405 1.539 - - - - - - 0.830 0.709 - - origin recognition complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:8490]
57. SCFD1 ENSGALG00000009916 5756 1.536 - - - - - - 0.775 0.761 - - sec1 family domain containing 1 [Source:NCBI gene;Acc:423307]
58. SH3TC1 ENSGALG00000015568 484 1.535 - - - - - - - - 0.767 0.768 SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
59. NTL ENSGALG00000005156 278 1.533 - - - - - - - - 0.804 0.729 neurotrypsin-like, transcript variant X7
60. YME1L1 ENSGALG00000007492 8652 1.53 - - - - - - 0.741 0.789 - - YME1 like 1 ATPase [Source:NCBI gene;Acc:428418]
61. INVS ENSGALG00000013441 1123 1.529 - - 0.808 - - - - - 0.721 - inversin [Source:NCBI gene;Acc:395234]
62. ETV4 ENSGALG00000036678 2424 1.528 - - 0.794 - - - 0.734 - - - ETS variant 4 [Source:HGNC Symbol;Acc:HGNC:3493]
63. C5H14ORF166 C5H14ORF166 24176 1.524 - - 0.812 - - - 0.712 - - -
64. MIB1 ENSGALG00000014974 3583 1.52 - - - - - - - 0.755 0.765 - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
65. UCK2 ENSGALG00000003510 2512 1.52 - - - - - - 0.796 - - 0.724 uridine-cytidine kinase 2 [Source:NCBI gene;Acc:424406]
66. CDR2L ENSGALG00000026295 4142 1.52 - - - - - - 0.813 0.707 - - cerebellar degeneration related protein 2 like [Source:HGNC Symbol;Acc:HGNC:29999]
67. DMB2 ENSGALG00000038393 1257 1.516 - - - - - - - - 0.736 0.780 major histocompatibility complex, class II, DM beta 2 [Source:NCBI gene;Acc:417051]
68. SNX2 ENSGALG00000005337 590 1.515 - - 0.808 - - - - - 0.707 - sorting nexin 2 [Source:NCBI gene;Acc:426797]
69. GPN3 ENSGALG00000003807 6320 1.513 - - - - - - 0.803 0.710 - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
70. ARHGAP19 ENSGALG00000007609 3655 1.512 - - - - - - 0.743 0.769 - - Rho GTPase activating protein 19 [Source:NCBI gene;Acc:423846]
71. PCBP4 ENSGALG00000027695 7937 1.511 - - 0.754 - - - - 0.757 - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
72. PAPSS1 ENSGALG00000010542 5631 1.511 - - 0.702 - - - - 0.809 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:8603]
73. STRN3 ENSGALG00000040464 9045 1.509 - - 0.711 - - - - 0.798 - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
74. COIL ENSGALG00000003158 7806 1.507 - - - - - - 0.753 0.754 - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
75. ZEB2 ENSGALG00000040465 315 1.507 - - 0.804 - - - - - 0.703 - Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
76. FAM57A ENSGALG00000004820 1492 1.504 - - - - - - 0.751 - 0.753 - family with sequence similarity 57 member A [Source:HGNC Symbol;Acc:HGNC:29646]
77. SBNO2 ENSGALG00000037522 1546 1.503 - - - - - - - 0.739 0.764 - strawberry notch homolog 2 [Source:HGNC Symbol;Acc:HGNC:29158]
78. NAA20 ENSGALG00000012587 11349 1.5 - - - - - - - 0.799 0.701 - N(alpha)-acetyltransferase 20, NatB catalytic subunit [Source:HGNC Symbol;Acc:HGNC:15908]
79. HSF2 ENSGALG00000038420 5259 1.499 - - - - - - 0.758 0.741 - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
80. PEX16 ENSGALG00000008421 3684 1.498 - - - - - - 0.779 0.719 - - peroxisomal biogenesis factor 16 [Source:HGNC Symbol;Acc:HGNC:8857]
81. FOXM1 ENSGALG00000013420 2274 1.495 - - 0.785 - - - - 0.710 - - forkhead box M1 [Source:NCBI gene;Acc:430534]
82. NAT9 ENSGALG00000007723 2098 1.492 - - 0.713 - - - 0.779 - - - N-acetyltransferase 9 (putative), transcript variant X7
83. FTSJ2 FTSJ2 2951 1.492 - - 0.737 - - - 0.755 - - -
84. PRPF6 ENSGALG00000006001 8572 1.492 - - - - - - 0.734 0.758 - - pre-mRNA processing factor 6 [Source:HGNC Symbol;Acc:HGNC:15860]
85. ENSGALG00000006730 ENSGALG00000006730 3695 1.491 - - - - - - - 0.732 0.759 -
86. IGDCC4 ENSGALG00000007410 5457 1.491 - - 0.762 - - - 0.729 - - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
87. FAM178A FAM178A 2738 1.49 - - 0.703 - - - - - - 0.787
88. TSN ENSGALG00000011652 905 1.489 - - 0.770 - - - - - 0.719 - translin [Source:NCBI gene;Acc:395955]
89. HISTH1 ENSGALG00000011747 16825 1.488 - - - - - - 0.710 0.778 - - histone H1
90. GNMT ENSGALG00000043290 3288 1.488 - - 0.774 - - - - - 0.714 - glycine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4415]
91. WDR47 ENSGALG00000002129 2624 1.486 - - 0.713 - - - 0.773 - - - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
92. GALM ENSGALG00000013828 1546 1.484 - - - - - - - 0.714 0.770 - galactose mutarotase [Source:HGNC Symbol;Acc:HGNC:24063]
93. SERINC2 ENSGALG00000021685 1581 1.483 - - - - - - - - 0.758 0.725 serine incorporator 2 [Source:NCBI gene;Acc:419558]
94. SUGP1 ENSGALG00000042132 2771 1.481 - - - - - - 0.735 0.746 - - SURP and G-patch domain containing 1 [Source:NCBI gene;Acc:428349]
95. RRP1B ENSGALG00000035696 12309 1.481 - - - - - - - 0.751 0.730 - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
96. ACSL3 ENSGALG00000005206 1763 1.48 - - - - - - - - 0.761 0.719 acyl-CoA synthetase long chain family member 3 [Source:HGNC Symbol;Acc:HGNC:3570]
97. NSG1 ENSGALG00000015010 5829 1.48 - - 0.765 - - - 0.715 - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
98. SNX4 ENSGALG00000012052 11634 1.477 - - - - - - 0.719 0.758 - - sorting nexin 4 [Source:HGNC Symbol;Acc:HGNC:11175]
99. FZD2 ENSGALG00000030847 3286 1.475 - - 0.766 - - - - 0.709 - - frizzled class receptor 2 [Source:NCBI gene;Acc:374061]
100. ABCC9 ENSGALG00000013244 2153 1.474 - - - - - - 0.769 0.705 - - ATP binding cassette subfamily C member 9 [Source:HGNC Symbol;Acc:HGNC:60]

There are 1289 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA