Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RIPK4

Gene Name Gene ID Reads Annotation
RIPK4 ENSGALG00000040189 102 receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]











Genes with expression patterns similar to RIPK4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RIPK4 ENSGALG00000040189 102 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]
2. PRKCE ENSGALG00000010000 99 2.419 - - 0.893 - - - 0.768 0.758 - - protein kinase C epsilon, transcript variant X1
3. ARHGAP25 ENSGALG00000035194 74 1.74 - - - - - - - 0.897 - 0.843 Rho GTPase activating protein 25 [Source:NCBI gene;Acc:419516]
4. STXBP1 ENSGALG00000040003 157 1.737 - - 0.829 - - - - 0.908 - - syntaxin binding protein 1 [Source:NCBI gene;Acc:404293]
5. TP53I3 ENSGALG00000016502 178 1.694 - - - - - - 0.794 0.900 - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
6. LMOD1 ENSGALG00000028721 81 1.655 - - - - - 0.776 - 0.879 - - leiomodin 1 [Source:HGNC Symbol;Acc:HGNC:6647]
7. CNP1 ENSGALG00000028638 56 1.653 - - 0.894 - - - - - - 0.759 C-type natriuretic peptide 1 [Source:NCBI gene;Acc:100499455]
8. PHTF2 ENSGALG00000008335 722 1.642 - - 0.894 - - - 0.748 - - - putative homeodomain transcription factor 2 [Source:NCBI gene;Acc:417728]
9. KDM5A ENSGALG00000012986 624 1.614 - - - - - - 0.795 0.819 - - lysine demethylase 5A [Source:HGNC Symbol;Acc:HGNC:9886]
10. VTI1B ENSGALG00000009526 133 1.611 - - 0.825 - - - 0.786 - - - vesicle transport through interaction with t-SNAREs 1B [Source:HGNC Symbol;Acc:HGNC:17793]
11. NPTN ENSGALG00000001741 481 1.606 - - - - - - 0.746 0.860 - - neuroplastin [Source:NCBI gene;Acc:415316]
12. ASB13 ENSGALG00000008401 181 1.559 - - - - - - 0.751 0.808 - - ankyrin repeat and SOCS box containing 13 [Source:NCBI gene;Acc:416691]
13. TSPAN14 ENSGALG00000002414 69 1.537 - - 0.765 - - - 0.772 - - - tetraspanin 14 [Source:NCBI gene;Acc:423624]
14. DYNLRB2 ENSGALG00000005402 630 1.521 - - 0.780 - - - - - - 0.741 dynein light chain roadblock-type 2 [Source:NCBI gene;Acc:415802]
15. NSUN5 ENSGALG00000000891 1356 1.517 - - - - - - 0.713 0.804 - - NOP2/Sun RNA methyltransferase family member 5 [Source:HGNC Symbol;Acc:HGNC:16385]
16. SNED1 ENSGALG00000043596 693 1.497 - - 0.795 - - - - 0.702 - - sushi, nidogen and EGF like domains 1 [Source:HGNC Symbol;Acc:HGNC:24696]
17. FOXP4 ENSGALG00000033497 13 0.983 - - - - - - - 0.983 - - forkhead box P4 [Source:HGNC Symbol;Acc:HGNC:20842]
18. USP53 ENSGALG00000011990 12 0.983 - - - - - - - 0.983 - - ubiquitin specific peptidase 53 [Source:HGNC Symbol;Acc:HGNC:29255]
19. PLB1 PLB1 101 0.983 - - - - - - - 0.983 - -
20. STAB1 21 0.983 - - - - - - - 0.983 - - stabilin 1, transcript variant X2
21. ENSGALG00000019053 ENSGALG00000019053 8 0.983 - - - - - - - 0.983 - -
22. GFAP ENSGALG00000000909 21 0.983 - - - - - - - 0.983 - - glial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]
23. SDR42E2 ENSGALG00000006964 57 0.983 - - - - - - - 0.983 - - short chain dehydrogenase/reductase family 42E, member 2 [Source:NCBI gene;Acc:416618]
24. CCDC96 9 0.983 - - - - - - - 0.983 - - coiled-coil domain containing 96
25. APOAIV APOAIV 5 0.983 - - - - - - - 0.983 - -
26. GINS3 ENSGALG00000031209 32 0.983 - - - - - - - 0.983 - - GINS complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25851]
27. KRT20 ENSGALG00000019716 11 0.981 - - - - - - - 0.981 - - keratin 20 [Source:NCBI gene;Acc:420045]
28. ICOS ENSGALG00000008656 27 0.981 - - - - - - - 0.981 - - inducible T cell costimulator [Source:NCBI gene;Acc:424105]
29. TMCO4 ENSGALG00000004081 31 0.98 - - - - - - - 0.980 - - transmembrane and coiled-coil domains 4 [Source:HGNC Symbol;Acc:HGNC:27393]
30. MAPT ENSGALG00000000625 659 0.98 - - - - - - - 0.980 - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
31. INA ENSGALG00000028238 208 0.979 - - - - - - - 0.979 - - internexin neuronal intermediate filament protein alpha
32. CD4 ENSGALG00000014477 19 0.978 - - - - - - - 0.978 - - CD4 molecule [Source:NCBI gene;Acc:395362]
33. ANKRD44 ENSGALG00000007996 17 0.974 - - - - - - - 0.974 - - ankyrin repeat domain 44 [Source:NCBI gene;Acc:424055]
34. DNAI2 ENSGALG00000004495 45 0.973 - - - - - - - 0.973 - - dynein axonemal intermediate chain 2
35. ABCA8 ENSGALG00000021399 11 0.973 - - - - - - - 0.973 - - ATP binding cassette subfamily A member 8
36. KLRD1 ENSGALG00000014722 27 0.97 - - - - - - - 0.970 - - killer cell lectin like receptor D1 [Source:NCBI gene;Acc:769174]
37. ZIC3 ENSGALG00000031144 863 0.968 - - - - - - - 0.968 - - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
38. AQP12 AQP12 11 0.966 - - - - - - - 0.966 - -
39. HAVCR1 ENSGALG00000017362 25 0.962 - - - - - - - 0.962 - - hepatitis A virus cellular receptor 1 [Source:NCBI gene;Acc:416249]
40. KIAA0513 ENSGALG00000025938 46 0.96 - - - - - - - 0.960 - - KIAA0513 [Source:HGNC Symbol;Acc:HGNC:29058]
41. IRG1 IRG1 21 0.959 - - - - - - - 0.959 - -
42. NXPH2 ENSGALG00000029083 353 0.956 - - - - - - - 0.956 - - neurexophilin 2 [Source:HGNC Symbol;Acc:HGNC:8076]
43. PAK2 ENSGALG00000006426 283 0.954 - - - - - - - 0.954 - - p21 (RAC1) activated kinase 2 [Source:HGNC Symbol;Acc:HGNC:8591]
44. PRSS35 ENSGALG00000015847 52 0.954 - - - - - - - 0.954 - - serine protease 35 [Source:HGNC Symbol;Acc:HGNC:21387]
45. DVL3 ENSGALG00000008414 38 0.951 - - 0.951 - - - - - - - dishevelled segment polarity protein 3 [Source:HGNC Symbol;Acc:HGNC:3087]
46. PTPRD ENSGALG00000015058 37 0.951 - - - - - - - 0.951 - - protein tyrosine phosphatase, receptor type D [Source:HGNC Symbol;Acc:HGNC:9668]
47. EPB41L4A ENSGALG00000000234 113 0.949 - - - - - - - 0.949 - - erythrocyte membrane protein band 4.1 like 4A [Source:HGNC Symbol;Acc:HGNC:13278]
48. ENPP3 ENSGALG00000037587 25 0.949 - - - - - - - 0.949 - - ectonucleotide pyrophosphatase/phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:3358]
49. LOC417973 ENSGALG00000019325 9 0.947 - - - - - - - 0.947 - - uncharacterized LOC417973, transcript variant X1
50. RNASET2 ENSGALG00000011426 40 0.946 - - - - - - - 0.946 - - ribonuclease T2 [Source:NCBI gene;Acc:421569]
51. ENSGALG00000019522 ENSGALG00000019522 122 0.938 - - - - - - - 0.938 - -
52. ENSGALG00000023731 ENSGALG00000023731 149 0.937 - - - - - - - 0.937 - -
53. DZANK1 ENSGALG00000008731 120 0.932 - - - - - - - 0.932 - - double zinc ribbon and ankyrin repeat domains 1 [Source:NCBI gene;Acc:416722]
54. ACSF3 ENSGALG00000035225 261 0.932 - - 0.932 - - - - - - - acyl-CoA synthetase family member 3 [Source:HGNC Symbol;Acc:HGNC:27288]
55. ENSGALG00000021882 ENSGALG00000021882 63 0.928 - - - - - - - 0.928 - -
56. ABCC4 ENSGALG00000016896 154 0.928 - - - - - - - 0.928 - - ATP binding cassette subfamily C member 4 [Source:NCBI gene;Acc:418791]
57. SMYD1 ENSGALG00000015935 75 0.928 - - - - - - - 0.928 - - SET and MYND domain containing 1 [Source:NCBI gene;Acc:373960]
58. DNALI1 ENSGALG00000001996 64 0.927 - - 0.927 - - - - - - - dynein axonemal light intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:14353]
59. ZC4H2 ENSGALG00000042725 361 0.927 - - 0.927 - - - - - - - zinc finger C4H2-type containing, transcript variant X4
60. EML5 ENSGALG00000010639 25 0.925 - - 0.925 - - - - - - - echinoderm microtubule associated protein like 5, transcript variant X1
61. ENSGALG00000019430 ENSGALG00000019430 32 0.924 - - - - - - - 0.924 - -
62. AHR2 ENSGALG00000023742 21 0.924 - - 0.924 - - - - - - - Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
63. ARRDC1 ENSGALG00000008475 80 0.924 - - - - - - - 0.924 - - arrestin domain containing 1 [Source:NCBI gene;Acc:427772]
64. LLGL1 ENSGALG00000014408 15 0.923 - - 0.923 - - - - - - - LLGL1, scribble cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:6628]
65. C15orf60 C15orf60 16 0.922 - - 0.922 - - - - - - -
66. ATXN3 ENSGALG00000010766 48 0.922 - - 0.922 - - - - - - - ataxin 3 [Source:NCBI gene;Acc:378424]
67. NRIP3 ENSGALG00000005903 58 0.922 - - - - - - - 0.922 - - nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
68. PRC1 ENSGALG00000012836 20 0.922 - - 0.922 - - - - - - - protein regulator of cytokinesis 1 [Source:NCBI gene;Acc:770336]
69. EPHA1 ENSGALG00000014687 174 0.916 - - 0.916 - - - - - - - EPH receptor A1 [Source:NCBI gene;Acc:378782]
70. FAM3B ENSGALG00000016140 111 0.914 - - 0.914 - - - - - - - family with sequence similarity 3 member B [Source:HGNC Symbol;Acc:HGNC:1253]
71. FSCN2 ENSGALG00000023354 13 0.914 - - 0.914 - - - - - - - fascin actin-bundling protein 2, retinal [Source:NCBI gene;Acc:429198]
72. KIDINS220 ENSGALG00000016409 854 0.914 - - 0.914 - - - - - - - kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
73. KPNA5 ENSGALG00000014937 28 0.912 - - 0.912 - - - - - - - karyopherin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6398]
74. CCDC86 ENSGALG00000036935 5280 0.91 - - - - - - - 0.910 - - coiled-coil domain containing 86 [Source:HGNC Symbol;Acc:HGNC:28359]
75. GALNT11 ENSGALG00000006233 210 0.91 - - 0.910 - - - - - - - polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
76. OTOA ENSGALG00000007070 94 0.908 - - 0.908 - - - - - - - otoancorin [Source:HGNC Symbol;Acc:HGNC:16378]
77. ADCYAP1R1 ENSGALG00000005223 114 0.907 - - - - - - - 0.907 - - ADCYAP receptor type I [Source:NCBI gene;Acc:420386]
78. DLX6 ENSGALG00000023195 29 0.907 - - 0.907 - - - - - - - distal-less homeobox 6 [Source:NCBI gene;Acc:772070]
79. FAM199X ENSGALG00000008872 44 0.906 - - 0.906 - - - - - - - family with sequence similarity 199, X-linked [Source:HGNC Symbol;Acc:HGNC:25195]
80. ENSGALG00000028778 ENSGALG00000028778 47 0.905 - - 0.905 - - - - - - -
81. PDZK1IP1 ENSGALG00000010473 551 0.905 - - 0.905 - - - - - - - PDZK1 interacting protein 1 [Source:NCBI gene;Acc:424619]
82. CD300A CD300A 173 0.903 - - 0.903 - - - - - - -
83. TOX3 ENSGALG00000034649 54 0.903 - - 0.903 - - - - - - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
84. TRAF-5 TRAF-5 102 0.902 - - - - - - - 0.902 - -
85. FAM219A ENSGALG00000005821 52 0.901 - - - - - - - 0.901 - - family with sequence similarity 219 member A [Source:HGNC Symbol;Acc:HGNC:19920]
86. ENSGALG00000005723 ENSGALG00000005723 36 0.901 - - 0.901 - - - - - - -
87. ZNFX1 ENSGALG00000004859 33 0.901 - - - - - - - 0.901 - - zinc finger NFX1-type containing 1 [Source:HGNC Symbol;Acc:HGNC:29271]
88. PLXNB2 ENSGALG00000039861 338 0.9 - - 0.900 - - - - - - - plexin B2 [Source:HGNC Symbol;Acc:HGNC:9104]
89. CD200R1A CD200R1A 105 0.9 - - - - - - - 0.900 - -
90. CREB3 ENSGALG00000002523 23 0.898 - - 0.898 - - - - - - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
91. GPR61 ENSGALG00000040168 70 0.896 - - - - - - - 0.896 - - G protein-coupled receptor 61 [Source:HGNC Symbol;Acc:HGNC:13300]
92. MMEL1 ENSGALG00000001115 46 0.895 - - - - - - - 0.895 - - membrane metalloendopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:14668]
93. ARHGEF37 ENSGALG00000039652 28 0.894 - - - - - - - 0.894 - - Rho guanine nucleotide exchange factor 37 [Source:HGNC Symbol;Acc:HGNC:34430]
94. CNTN1 ENSGALG00000009523 158 0.893 - - - - - - - 0.893 - - contactin 1 [Source:NCBI gene;Acc:417786]
95. SPINK4 ENSGALG00000043964 50 0.893 - - - - - - - 0.893 - - serine peptidase inhibitor, Kazal type 4 [Source:HGNC Symbol;Acc:HGNC:16646]
96. PKD2 ENSGALG00000010921 55 0.892 - - 0.892 - - - - - - - polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
97. TBC1D8B ENSGALG00000009040 75 0.892 - - 0.892 - - - - - - - TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
98. DFFB ENSGALG00000036295 88 0.892 - - 0.892 - - - - - - - DNA fragmentation factor subunit beta [Source:NCBI gene;Acc:374158]
99. BMP2K ENSGALG00000010885 37 0.89 - - 0.890 - - - - - - - BMP2 inducible kinase [Source:HGNC Symbol;Acc:HGNC:18041]
100. C1QTNF6 ENSGALG00000027067 493 0.888 - - - - - - - 0.888 - - C1q and TNF related 6 [Source:HGNC Symbol;Acc:HGNC:14343]

There are 422 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA