Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RIPK1

Gene Name Gene ID Reads Annotation
RIPK1 ENSGALG00000012827 3405 receptor interacting serine/threonine kinase 1 [Source:NCBI gene;Acc:378921]











Genes with expression patterns similar to RIPK1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. RIPK1 ENSGALG00000012827 3405 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 receptor interacting serine/threonine kinase 1 [Source:NCBI gene;Acc:378921]
2. C6ORF162 C6ORF162 4217 1.78 - - - - - - 0.794 0.986 - -
3. LTN1 ENSGALG00000015804 3784 1.732 - - - - - - 0.744 0.988 - - listerin E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:418482]
4. AP2A2 ENSGALG00000006799 13874 1.717 - - - - - - 0.816 0.901 - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
5. ENSGALG00000007355 ENSGALG00000007355 2149 1.693 - - - - - - - 0.976 0.717 -
6. SH3GLB1 ENSGALG00000006284 12764 1.687 - - - - - - 0.757 0.930 - - SH3 domain containing GRB2 like endophilin B1 [Source:NCBI gene;Acc:424522]
7. SCCPDH ENSGALG00000010641 8624 1.645 - - - - - - 0.752 0.893 - - saccharopine dehydrogenase (putative) [Source:NCBI gene;Acc:421485]
8. THUMPD3 ENSGALG00000008394 17711 1.607 - - - - - - 0.712 0.895 - - THUMP domain containing 3, transcript variant X2
9. PCNP ENSGALG00000015330 15750 1.603 - - - - - - 0.773 0.830 - - PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
10. PLRG1 ENSGALG00000009257 8613 1.581 - - - - - - 0.714 0.867 - - pleiotropic regulator 1 [Source:HGNC Symbol;Acc:HGNC:9089]
11. GPC4 ENSGALG00000006080 56498 1.561 - - - - - - 0.814 0.747 - - glypican 4 [Source:HGNC Symbol;Acc:HGNC:4452]
12. SWIP-1 SWIP-1 6024 1.556 - - - - - - 0.780 - 0.776 -
13. SPCS3 ENSGALG00000010839 19106 1.54 - - - - - - 0.772 - 0.768 - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
14. ESD ENSGALG00000016991 11289 1.519 - - - - - - - 0.812 0.707 - esterase D [Source:NCBI gene;Acc:418856]
15. BIRC6 ENSGALG00000010541 7999 1.497 - - - - - - 0.763 0.734 - - baculoviral IAP repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:13516]
16. TMED7 ENSGALG00000028484 21008 1.497 - - - - - - 0.709 0.788 - - Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
17. UTP6 ENSGALG00000003260 4909 1.479 - - - - - - 0.707 - 0.772 - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
18. KLHDC4 ENSGALG00000037315 9828 1.453 - - - - - - 0.737 0.716 - - kelch domain containing 4 [Source:NCBI gene;Acc:415831]
19. TIAR TIAR 2471 1.448 - - - - - - 0.731 - 0.717 -
20. METTL23 ENSGALG00000001790 7906 1.439 - - - - - - 0.704 0.735 - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
21. ZMYM3 ENSGALG00000005533 2927 1.434 - - - - - 0.731 0.703 - - - zinc finger MYM-type containing 3 [Source:HGNC Symbol;Acc:HGNC:13054]
22. BCLAF1 ENSGALG00000013935 7596 1.412 - - - - - - 0.710 - 0.702 - BCL2 associated transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:16863]
23. SMAD1 ENSGALG00000009977 3540 0.991 - - - - - - - 0.991 - - SMAD family member 1 [Source:NCBI gene;Acc:395680]
24. ARHGAP32 ENSGALG00000043511 7916 0.991 - - - - - - - 0.991 - - Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:HGNC:17399]
25. SPRYD7 ENSGALG00000017010 1910 0.99 - - - - - - - 0.990 - - SPRY domain containing 7 [Source:NCBI gene;Acc:418871]
26. KLHL13 KLHL13 2712 0.988 - - - - - - - 0.988 - -
27. C2CD5 ENSGALG00000013210 3060 0.988 - - - - - - - 0.988 - - C2 calcium dependent domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29062]
28. LAMA4 ENSGALG00000015001 993 0.988 - - - - - - - 0.988 - - laminin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6484]
29. TMEM245 ENSGALG00000013138 501 0.988 - - - - - - - 0.988 - - transmembrane protein 245 [Source:HGNC Symbol;Acc:HGNC:1363]
30. SRFBP1 ENSGALG00000005316 6826 0.987 - - - - - - - 0.987 - - serum response factor binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26333]
31. TMEM237 ENSGALG00000008381 1317 0.987 - - - - - - - 0.987 - - transmembrane protein 237 [Source:NCBI gene;Acc:424084]
32. FAAH ENSGALG00000010433 3309 0.986 - - - - - - - 0.986 - - fatty acid amide hydrolase [Source:HGNC Symbol;Acc:HGNC:3553]
33. PLEKHA3 ENSGALG00000009135 1700 0.986 - - - - - - - 0.986 - - pleckstrin homology domain containing A3 [Source:NCBI gene;Acc:424128]
34. CACTIN ENSGALG00000024391 1408 0.986 - - - - - - - 0.986 - - cactin, spliceosome C complex subunit [Source:HGNC Symbol;Acc:HGNC:29938]
35. ZUFSP 549 0.986 - - - - - - - 0.986 - - zinc finger with UFM1 specific peptidase domain
36. PIK3R3 ENSGALG00000010335 374 0.986 - - - - - - - 0.986 - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
37. C1orf123 ENSGALG00000026516 3227 0.986 - - - - - - - 0.986 - - chromosome 1 open reading frame 123 [Source:HGNC Symbol;Acc:HGNC:26059]
38. LEMD2 ENSGALG00000002870 2803 0.986 - - - - - - - 0.986 - - LEM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21244]
39. AEN ENSGALG00000044204 2633 0.986 - - - - - - - 0.986 - - apoptosis enhancing nuclease, transcript variant X1
40. ARL1 ENSGALG00000011651 3230 0.986 - - - - - - - 0.986 - - ADP ribosylation factor like GTPase 1 [Source:NCBI gene;Acc:417934]
41. H2AFY2 ENSGALG00000004794 576 0.985 - - - - - - - 0.985 - - H2A histone family, member Y2 [Source:NCBI gene;Acc:423721]
42. PCP4 ENSGALG00000022819 880 0.985 - - - - - - - 0.985 - - Purkinje cell protein 4 [Source:NCBI gene;Acc:771220]
43. PTN ENSGALG00000040493 864 0.985 - - - - - - - 0.985 - - pleiotrophin [Source:NCBI gene;Acc:418125]
44. gga-mir-1723 ENSGALG00000025386 6662 0.985 - - - - - - - 0.985 - - gga-mir-1723 [Source:miRBase;Acc:MI0007460]
45. B4GALT3 ENSGALG00000022891 2825 0.985 - - - - - - - 0.985 - - beta-1,4-galactosyltransferase 3
46. PTER ENSGALG00000008728 162 0.985 - - - - - - - 0.985 - - phosphotriesterase related [Source:HGNC Symbol;Acc:HGNC:9590]
47. RFLB RFLB 140 0.984 - - - - - - - 0.984 - -
48. SEMA7A ENSGALG00000001412 1505 0.984 - - - - - - - 0.984 - - semaphorin 7A (John Milton Hagen blood group) [Source:NCBI gene;Acc:415298]
49. MEIS1 ENSGALG00000041626 3865 0.984 - - - - - - - 0.984 - - Meis homeobox 1 [Source:NCBI gene;Acc:395589]
50. PLPPR1 ENSGALG00000015542 3179 0.984 - - - - - - - 0.984 - - phospholipid phosphatase related 1 [Source:HGNC Symbol;Acc:HGNC:25993]
51. DENND1A ENSGALG00000001157 503 0.984 - - - - - - - 0.984 - - DENN domain containing 1A [Source:HGNC Symbol;Acc:HGNC:29324]
52. ENSGALG00000029113 ENSGALG00000029113 737 0.984 - - - - - - - 0.984 - -
53. ARRDC2 ENSGALG00000003527 1797 0.984 - - - - - - - 0.984 - - arrestin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25225]
54. LIN28A ENSGALG00000036022 542 0.984 - - - - - - - 0.984 - - lin-28 homolog A [Source:NCBI gene;Acc:428206]
55. SNX3 ENSGALG00000015304 1631 0.984 - - - - - - - 0.984 - - sorting nexin 3 [Source:NCBI gene;Acc:421772]
56. LDLRAP1 ENSGALG00000001051 1657 0.984 - - - - - - - 0.984 - - low density lipoprotein receptor adaptor protein 1 [Source:HGNC Symbol;Acc:HGNC:18640]
57. GALNT2 ENSGALG00000011106 167 0.984 - - - - - - - 0.984 - - polypeptide N-acetylgalactosaminyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:4124]
58. C14orf105 C14orf105 135 0.984 - - - - - - - 0.984 - -
59. MYO3A ENSGALG00000007647 643 0.984 - - - - - - - 0.984 - - myosin IIIA [Source:HGNC Symbol;Acc:HGNC:7601]
60. CDK14 ENSGALG00000009062 995 0.984 - - - - - - - 0.984 - - cyclin dependent kinase 14 [Source:HGNC Symbol;Acc:HGNC:8883]
61. ARHGEF12 ENSGALG00000006663 1369 0.984 - - - - - - - 0.984 - - Rho guanine nucleotide exchange factor 12 [Source:HGNC Symbol;Acc:HGNC:14193]
62. SKIV2L2 ENSGALG00000014709 2926 0.984 - - - - - - - 0.984 - - Ski2 like RNA helicase 2 [Source:NCBI gene;Acc:427137]
63. C4H4ORF41 C4H4ORF41 1520 0.983 - - - - - - - 0.983 - -
64. MMP16 ENSGALG00000032031 827 0.983 - - - - - - - 0.983 - - matrix metallopeptidase 16 [Source:NCBI gene;Acc:396116]
65. NPB NPB 8056 0.983 - - - - - - - 0.983 - -
66. ARID1B ENSGALG00000013683 3397 0.982 - - - - - - - 0.982 - - AT-rich interaction domain 1B [Source:HGNC Symbol;Acc:HGNC:18040]
67. GATAD2A ENSGALG00000042900 6337 0.982 - - - - - - - 0.982 - - GATA zinc finger domain containing 2A [Source:NCBI gene;Acc:420109]
68. ILKAP ENSGALG00000006253 7388 0.982 - - - - - - - 0.982 - - ILK associated serine/threonine phosphatase [Source:HGNC Symbol;Acc:HGNC:15566]
69. ETAA1 ENSGALG00000027922 1684 0.982 - - - - - - - 0.982 - - ETAA1, ATR kinase activator [Source:HGNC Symbol;Acc:HGNC:24648]
70. PSD2 ENSGALG00000030836 236 0.981 - - - - - - - 0.981 - - pleckstrin and Sec7 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:19092]
71. GAS6 ENSGALG00000016820 481 0.981 - - - - - - - 0.981 - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
72. HTRA1 ENSGALG00000041140 1750 0.98 - - - - - - - 0.980 - - HtrA serine peptidase 1 [Source:HGNC Symbol;Acc:HGNC:9476]
73. RERG ENSGALG00000028186 1124 0.98 - - - - - - - 0.980 - - RAS like estrogen regulated growth inhibitor [Source:HGNC Symbol;Acc:HGNC:15980]
74. UBXN2B ENSGALG00000030585 2177 0.98 - - - - - - - 0.980 - - UBX domain protein 2B [Source:NCBI gene;Acc:421135]
75. ARNT ENSGALG00000000751 3495 0.98 - - - - - - - 0.980 - - aryl hydrocarbon receptor nuclear translocator [Source:NCBI gene;Acc:374026]
76. PALD1 ENSGALG00000004465 3553 0.98 - - - - - - - 0.980 - - phosphatase domain containing, paladin 1 [Source:NCBI gene;Acc:373898]
77. CDXB CDXB 143 0.98 - - - - - - - 0.980 - -
78. FNDC5 ENSGALG00000003567 3328 0.98 - - - - - - - 0.980 - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
79. NOL6 ENSGALG00000030730 7191 0.979 - - - - - - - 0.979 - - nucleolar protein 6
80. SMPD4 ENSGALG00000006455 2270 0.979 - - - - - - - 0.979 - - sphingomyelin phosphodiesterase 4, transcript variant X1
81. TMEM144 ENSGALG00000026253 1744 0.979 - - - - - - - 0.979 - - transmembrane protein 144 [Source:HGNC Symbol;Acc:HGNC:25633]
82. GID8 ENSGALG00000005700 3992 0.978 - - - - - - - 0.978 - - GID complex subunit 8 homolog [Source:NCBI gene;Acc:419235]
83. SEC24B ENSGALG00000035482 3430 0.978 - - - - - - - 0.978 - - SEC24 homolog B, COPII coat complex component [Source:NCBI gene;Acc:422523]
84. C11H19ORF12 C11H19ORF12 5149 0.978 - - - - - - - 0.978 - -
85. THBS4 ENSGALG00000014804 4228 0.978 - - - - - - - 0.978 - - Gallus gallus thrombospondin 4 (THBS4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321549]
86. YOD1 ENSGALG00000037597 2989 0.977 - - - - - - - 0.977 - - YOD1 deubiquitinase [Source:NCBI gene;Acc:428266]
87. HNRNPK ENSGALG00000012591 1109 0.977 - - - - - - - 0.977 - - heterogeneous nuclear ribonucleoprotein K, transcript variant X8
88. BLZF1 ENSGALG00000015225 3594 0.977 - - - - - - - 0.977 - - basic leucine zipper nuclear factor 1 [Source:HGNC Symbol;Acc:HGNC:1065]
89. SYAP1 ENSGALG00000016548 3347 0.977 - - - - - - - 0.977 - - synapse associated protein 1 [Source:NCBI gene;Acc:418619]
90. CALSYNTENIN-1 CALSYNTENIN-1 11195 0.977 - - - - - - - 0.977 - -
91. SMAD2W ENSGALG00000014184 1773 0.977 - - - - - - - 0.977 - - SMAD family member 2-W, transcript variant X3
92. SGPL1 ENSGALG00000004553 4520 0.976 - - - - - - - 0.976 - - sphingosine-1-phosphate lyase 1 [Source:NCBI gene;Acc:423714]
93. SEMA5B ENSGALG00000011686 4184 0.976 - - - - - - - 0.976 - - semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]
94. ATRIP ENSGALG00000004670 3647 0.976 - - - - - - - 0.976 - - ATR interacting protein [Source:NCBI gene;Acc:415949]
95. PRPSAP2 ENSGALG00000005064 5549 0.975 - - - - - - - 0.975 - - phosphoribosyl pyrophosphate synthetase associated protein 2 [Source:NCBI gene;Acc:416521]
96. AK1 ENSGALG00000029150 5935 0.974 - - - - - - - 0.974 - - adenylate kinase 1 [Source:NCBI gene;Acc:396002]
97. TDRD3 ENSGALG00000016936 3412 0.973 - - - - - - - 0.973 - - tudor domain containing 3 [Source:NCBI gene;Acc:418823]
98. HIBADH ENSGALG00000033207 3540 0.971 - - - - - - - 0.971 - - 3-hydroxyisobutyrate dehydrogenase [Source:NCBI gene;Acc:420632]
99. HEATR6 ENSGALG00000005516 3347 0.969 - - - - - - - 0.969 - - HEAT repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:24076]
100. HSDL2 ENSGALG00000015663 8966 0.964 - - - - - - - 0.964 - - hydroxysteroid dehydrogenase like 2 [Source:HGNC Symbol;Acc:HGNC:18572]

There are 563 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA