Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RIN3

Gene Name Gene ID Reads Annotation
RIN3 ENSDARG00000077618 745 Ras and Rab interactor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8871]










Genes with expression patterns similar to RIN3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. RIN3 ENSDARG00000077618 745 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Ras and Rab interactor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8871]
2. cenpl ENSDARG00000038802 696 1.76 - - - - - - 0.783 0.977 - centromere protein L [Source:ZFIN;Acc:ZDB-GENE-040930-6]
3. pabpn1 ENSDARG00000045373 4876 1.724 - - - - - - 0.763 0.961 - poly(A) binding protein, nuclear 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2401]
4. exoc7 ENSDARG00000087229 987 1.717 - - - - - - 0.729 0.988 - exocyst complex component 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2752]
5. arap3 ENSDARG00000076801 725 1.706 - - - - - 0.729 - 0.977 - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-091019-1]
6. snx27a ENSDARG00000033804 2249 1.7 - - - - - - 0.735 0.965 - sorting nexin family member 27a [Source:ZFIN;Acc:ZDB-GENE-060503-371]
7. BDP1 BDP1 2514 1.697 - - - - - 0.737 - 0.960 -
8. zgc:113443 359 1.688 0.701 - - - - - - 0.987 - zgc:113443, transcript variant X3
9. stox2a ENSDARG00000070162 1620 1.688 - - - - - - 0.716 0.972 - storkhead box 2a [Source:ZFIN;Acc:ZDB-GENE-090313-101]
10. ttyh2l ENSDARG00000010727 204 1.571 0.786 - - - - - 0.785 - - tweety homolog 2, like [Source:ZFIN;Acc:ZDB-GENE-040426-2394]
11. tmem88a ENSDARG00000056920 536 1.565 0.799 - - - - - 0.766 - - transmembrane protein 88 a [Source:ZFIN;Acc:ZDB-GENE-040426-1808]
12. colec12 ENSDARG00000061140 1323 1.54 - 0.738 - - - - 0.802 - - collectin sub-family member 12 [Source:ZFIN;Acc:ZDB-GENE-030131-9807]
13. si:ch1073-291c23.2 ENSDARG00000074869 585 1.499 - 0.761 - - - - 0.738 - - si:ch1073-291c23.2 [Source:ZFIN;Acc:ZDB-GENE-081107-2]
14. foxp1b ENSDARG00000014181 2594 1.487 0.755 - - - - - 0.732 - - forkhead box P1b [Source:ZFIN;Acc:ZDB-GENE-041203-1]
15. ddx10 ENSDARG00000061865 855 1.474 - - - - - 0.702 0.772 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Source:ZFIN;Acc:ZDB-GENE-071022-2]
16. BX005410.1 ENSDARG00000115561 373 1.433 - 0.704 - - - 0.729 - - - si:ch211-106j24.1 [Source:NCBI gene;Acc:555478]
17. smyd5 ENSDARG00000071669 1194 0.997 - - - - - - - 0.997 - SMYD family member 5 [Source:ZFIN;Acc:ZDB-GENE-040912-39]
18. PARP14 PARP14 164 0.997 - - - - - - - 0.997 -
19. zgc:113019 ENSDARG00000099743 994 0.997 - - - - - - - 0.997 - zgc:113019 [Source:ZFIN;Acc:ZDB-GENE-050417-449]
20. hsd17b4 ENSDARG00000101239 301 0.997 - - - - - - - 0.997 - hydroxysteroid (17-beta) dehydrogenase 4 [Source:ZFIN;Acc:ZDB-GENE-040421-1]
21. si:dkey-238o14.5 si:dkey-238o14.5 450 0.997 - - - - - - - 0.997 -
22. slc6a11a ENSDARG00000074002 189 0.997 - - - - - - - 0.997 - solute carrier family 6 (neurotransmitter transporter), member 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3729]
23. hcst ENSDARG00000092074 172 0.997 - - - - - - - 0.997 - hematopoietic cell signal transducer [Source:ZFIN;Acc:ZDB-GENE-061130-1]
24. kmt2d ENSDARG00000037060 1232 0.997 - - - - - - - 0.997 - lysine (K)-specific methyltransferase 2D [Source:ZFIN;Acc:ZDB-GENE-060223-2]
25. CABZ01073405.1 CABZ01073405.1 275 0.997 - - - - - - - 0.997 -
26. si:dkeyp-59c12.1 ENSDARG00000038112 186 0.997 - - - - - - - 0.997 - si:dkeyp-59c12.1 [Source:ZFIN;Acc:ZDB-GENE-050419-167]
27. pir ENSDARG00000056638 722 0.996 - - - - - - - 0.996 - pirin [Source:ZFIN;Acc:ZDB-GENE-040718-288]
28. golga4 ENSDARG00000075331 447 0.996 - - - - - - - 0.996 - golgin A4 [Source:ZFIN;Acc:ZDB-GENE-050208-275]
29. cxxc1l cxxc1l 1035 0.996 - - - - - - - 0.996 -
30. wscd2 ENSDARG00000061819 304 0.996 - - - - - - - 0.996 - WSC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-124]
31. ftr23 ENSDARG00000067985 254 0.995 - - - - - - - 0.995 - finTRIM family, member 23 [Source:ZFIN;Acc:ZDB-GENE-070912-322]
32. TUBGCP6 1991 0.995 - - - - - - - 0.995 - tubulin, gamma complex associated protein 6
33. TAF4 TAF4 658 0.995 - - - - - - - 0.995 -
34. si:dkey-38p12.2 si:dkey-38p12.2 504 0.994 - - - - - - - 0.994 -
35. slc30a9 ENSDARG00000057272 766 0.994 - - - - - - - 0.994 - solute carrier family 30 (zinc transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-040724-254]
36. agtr1b ENSDARG00000045443 232 0.994 - - - - - - - 0.994 - angiotensin II receptor, type 1b [Source:ZFIN;Acc:ZDB-GENE-110411-117]
37. C17H15orf57 C17H15orf57 1366 0.994 - - - - - - - 0.994 -
38. prelid1b ENSDARG00000044169 501 0.994 - - - - - - - 0.994 - PRELI domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-169]
39. rdh12 ENSDARG00000018069 396 0.994 - - - - - - - 0.994 - retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
40. si:dkey-204f11.64 ENSDARG00000094695 586 0.994 - - - - - - - 0.994 - si:dkey-204f11.64 [Source:ZFIN;Acc:ZDB-GENE-030131-8332]
41. C6H1orf159 C6H1orf159 406 0.994 - - - - - - - 0.994 -
42. myo9b ENSDARG00000077410 1956 0.994 - - - - - - - 0.994 - myosin IXb [Source:ZFIN;Acc:ZDB-GENE-030131-938]
43. agk ENSDARG00000009837, ENSDARG00000113514 811 0.994 - - - - - - - 0.994 - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
44. cnp ENSDARG00000070822 649 0.993 - - - - - - - 0.993 - 2',3'-cyclic nucleotide 3' phosphodiesterase [Source:ZFIN;Acc:ZDB-GENE-030521-29]
45. ufsp2 ENSDARG00000056369, ENSDARG00000115753 998 0.993 - - - - - - - 0.993 - ufm1-specific peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8726]
46. uevld ENSDARG00000009266, ENSDARG00000116754 377 0.993 - - - - - - - 0.993 - UEV and lactate/malate dehyrogenase domains [Source:ZFIN;Acc:ZDB-GENE-040801-138]
47. ncapd3 ENSDARG00000034773, ENSDARG00000111405 823 0.992 - - - - - - - 0.992 - non-SMC condensin II complex, subunit D3 [Source:ZFIN;Acc:ZDB-GENE-040426-737]
48. nptx1l ENSDARG00000074671 569 0.992 - - - - - - - 0.992 - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
49. tsn ENSDARG00000041830, ENSDARG00000111147 1268 0.991 - - - - - - - 0.991 - translin [Source:ZFIN;Acc:ZDB-GENE-030131-6039]
50. USP6 USP6 613 0.991 - - - - - - - 0.991 -
51. araf ENSDARG00000054533 1132 0.991 - - - - - - - 0.991 - A-Raf proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050102-2]
52. fam96b 2255 0.991 - - - - - - - 0.991 - family with sequence similarity 96, member B
53. GGT7 ENSDARG00000115805 481 0.99 - - - - - - - 0.990 - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
54. paqr3a ENSDARG00000017703, ENSDARG00000117061 2018 0.99 - - - - - - - 0.990 - progestin and adipoQ receptor family member IIIa [Source:ZFIN;Acc:ZDB-GENE-040426-1667]
55. paxip1 ENSDARG00000005606 1417 0.99 - - - - - - - 0.990 - PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
56. csf1a ENSDARG00000075343 548 0.99 - - - - - - - 0.990 - colony stimulating factor 1a (macrophage) [Source:ZFIN;Acc:ZDB-GENE-080204-107]
57. si:dkey-3h3.3 ENSDARG00000067718 225 0.99 - - - - - - - 0.990 - si:dkey-3h3.3 [Source:ZFIN;Acc:ZDB-GENE-060526-299]
58. si:dkey-193b15.6 si:dkey-193b15.6 1340 0.988 - - - - - - - 0.988 -
59. WDR77 2463 0.987 - - - - - - - 0.987 - WD repeat domain 77
60. tfe3b ENSDARG00000019457, ENSDARG00000111231 507 0.987 - - - - - - - 0.987 - transcription factor binding to IGHM enhancer 3b [Source:ZFIN;Acc:ZDB-GENE-010919-3]
61. arpc5a ENSDARG00000039142 5482 0.987 - - - - - - - 0.987 - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
62. vps4b ENSDARG00000069175 1922 0.987 - - - - - - - 0.987 - vacuolar protein sorting 4b homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1235]
63. LRP10 ENSDARG00000054539 1895 0.986 - - - - - - - 0.986 - low density lipoprotein receptor-related protein 10 [Source:ZFIN;Acc:ZDB-GENE-140418-2]
64. RNF145 RNF145 1364 0.986 - - - - - - - 0.986 -
65. srebf2 ENSDARG00000063438 1982 0.986 - - - - - - - 0.986 - sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
66. gpr146 ENSDARG00000059610 810 0.986 - - - - - - - 0.986 - G protein-coupled receptor 146 [Source:ZFIN;Acc:ZDB-GENE-050823-3]
67. lamp1 1017 0.985 - - - - - - - 0.985 - lysosomal-associated membrane protein 1
68. sly1 sly1 2403 0.985 - - - - - - - 0.985 -
69. mpdu1a ENSDARG00000035562, ENSDARG00000109966 1169 0.985 - - - - - - - 0.985 - mannose-P-dolichol utilization defect 1a [Source:ZFIN;Acc:ZDB-GENE-040912-9]
70. IGSF3 ENSDARG00000077002, ENSDARG00000115203 564 0.985 - - - - - - - 0.985 - immunoglobulin superfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-243]
71. epc1 epc1 1164 0.984 - - - - - - - 0.984 -
72. vasna ENSDARG00000099266, ENSDARG00000111629 488 0.984 - - - - - - - 0.984 - vasorin a [Source:ZFIN;Acc:ZDB-GENE-050522-43]
73. yy1b ENSDARG00000027978 2669 0.982 - - - - - - - 0.982 - YY1 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2127]
74. gigfy2 3194 0.982 - - - - - - - 0.982 - GRB10 interacting GYF protein 2, transcript variant X1
75. SMIM19 ENSDARG00000037423, ENSDARG00000110214 886 0.982 - - - - - - - 0.982 - small integral membrane protein 19 [Source:ZFIN;Acc:ZDB-GENE-050913-125]
76. rab18a ENSDARG00000055291, ENSDARG00000111917 2088 0.981 - - - - - - - 0.981 - RAB18A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-3980]
77. rgs12b ENSDARG00000036774 5088 0.981 - - - - - - - 0.981 - regulator of G protein signaling 12b [Source:ZFIN;Acc:ZDB-GENE-031006-13]
78. si:ch211-76l23.4 ENSDARG00000096242 202 0.98 - - - - - - - 0.980 - si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310]
79. PHLPP1 ENSDARG00000078694 2466 0.979 - - - - - - - 0.979 - PH domain and leucine rich repeat protein phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-131127-271]
80. rnaseka ENSDARG00000069461 10304 0.979 - - - - - - - 0.979 - ribonuclease, RNase K a [Source:ZFIN;Acc:ZDB-GENE-060825-301]
81. pcyt2 ENSDARG00000043003 3506 0.979 - - - - - - - 0.979 - phosphate cytidylyltransferase 2, ethanolamine [Source:ZFIN;Acc:ZDB-GENE-041010-132]
82. ilf3a ENSDARG00000058660, ENSDARG00000116860 3760 0.979 - - - - - - - 0.979 - interleukin enhancer binding factor 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3151]
83. dyrk1b ENSDARG00000070187 2777 0.979 - - - - - - - 0.979 - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B [Source:ZFIN;Acc:ZDB-GENE-060503-499]
84. nr3c1 ENSDARG00000025032, ENSDARG00000112480, ENSDARG00000116957 2608 0.979 - - - - - - - 0.979 - nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) [Source:ZFIN;Acc:ZDB-GENE-050522-503]
85. scaf11 ENSDARG00000045885 3531 0.979 - - - - - - - 0.979 - SR-related CTD-associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-041210-22]
86. drg2 ENSDARG00000006642 1167 0.978 - - - - - - - 0.978 - developmentally regulated GTP binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040808-29]
87. trim8b ENSDARG00000060729, ENSDARG00000115043 1528 0.978 - - - - - - - 0.978 - tripartite motif containing 8b [Source:ZFIN;Acc:ZDB-GENE-030131-4325]
88. snrnp200 ENSDARG00000077536, ENSDARG00000114486 4981 0.978 - - - - - - - 0.978 - small nuclear ribonucleoprotein 200 (U5) [Source:ZFIN;Acc:ZDB-GENE-081105-64]
89. samd10a ENSDARG00000079978, ENSDARG00000112138 430 0.977 - - - - - - - 0.977 - sterile alpha motif domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-080204-53]
90. qars ENSDARG00000010316 2715 0.976 - - - - - - - 0.976 - glutaminyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1011]
91. elovl6l ENSDARG00000038639 1184 0.976 - - - - - - - 0.976 - ELOVL family member 6, elongation of long chain fatty acids like [Source:ZFIN;Acc:ZDB-GENE-031110-3]
92. AIFM2 ENSDARG00000077549 1419 0.976 - - - - - - - 0.976 - apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
93. ell ENSDARG00000000568 1404 0.976 - - - - - - - 0.976 - elongation factor RNA polymerase II [Source:ZFIN;Acc:ZDB-GENE-030131-3946]
94. cmtm3 ENSDARG00000008811, ENSDARG00000115417 502 0.975 - - - - - - - 0.975 - CKLF-like MARVEL transmembrane domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040801-206]
95. st6gal2 st6gal2 1570 0.973 - - - - - - - 0.973 -
96. COL13A1 1565 0.973 - - - - - - - 0.973 - collagen, type XIII, alpha 1, transcript variant X1
97. casc5 1487 0.973 - - - - - - - 0.973 - cancer susceptibility candidate 5, transcript variant X3
98. CCDC167 ENSDARG00000045850 1024 0.973 - - - - - - - 0.973 - coiled-coil domain containing 167 [Source:ZFIN;Acc:ZDB-GENE-041210-79]
99. usp1 ENSDARG00000056414 1816 0.971 - - - - - - - 0.971 - ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]
100. retsat ENSDARG00000018600 832 0.97 - - - - - - - 0.970 - retinol saturase (all-trans-retinol 13,14-reductase) [Source:ZFIN;Acc:ZDB-GENE-050320-11]

There are 503 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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